RNA–Protein interactions for RNA: ENST00000393283.5

RGPD5-203, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

TSL 1 (best) BASIC

Gene RGPD5, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-203ENST00000393283 KRTAP21-3Q3LHN1 58 aa6.6□□□□□ -1.35
RGPD5-203ENST00000393283 TPRXLQ17RH7 258 aa6.59□□□□□ -1.35
RGPD5-203ENST00000393283 KRTAP10-6P60371 365 aaPredicted RBP6.55□□□□□ -1.36
RGPD5-203ENST00000393283 APOBP04114 4563 aaKnown RBP6.55□□□□□ -1.36
RGPD5-203ENST00000393283 KRTAP10-8P60410 259 aa6.53□□□□□ -1.36
RGPD5-203ENST00000393283 RPS29P62273 56 aaKnown RBP6.53□□□□□ -1.36
RGPD5-203ENST00000393283 NDUFAF8A1L188 74 aa6.52□□□□□ -1.37
RGPD5-203ENST00000393283 HSPG2P98160 4391 aa6.51□□□□□ -1.37
RGPD5-203ENST00000393283 FAT3Q8TDW7 4589 aa6.5□□□□□ -1.37
RGPD5-203ENST00000393283 KRTAP3-3Q9BYR6 98 aa6.5□□□□□ -1.37
RGPD5-203ENST00000393283 S4R3F8 94 aa6.5□□□□□ -1.37
RGPD5-203ENST00000393283 KRTAP12-2P59991 146 aa6.46□□□□□ -1.38
RGPD5-203ENST00000393283 KRTAP3-2Q9BYR7 98 aa6.45□□□□□ -1.38
RGPD5-203ENST00000393283 KMT2CQ8NEZ4 4911 aaKnown RBP6.44□□□□□ -1.38
RGPD5-203ENST00000393283 KRTAP10-4P60372 401 aaPredicted RBP6.43□□□□□ -1.38
RGPD5-203ENST00000393283 PKHD1L1Q86WI1 4243 aa6.4□□□□□ -1.39
RGPD5-203ENST00000393283 LPAP08519 4548 aa6.39□□□□□ -1.39
RGPD5-203ENST00000393283 XP32Q5T750 250 aa6.38□□□□□ -1.39
RGPD5-203ENST00000393283 Q5VSD8 79 aa6.37□□□□□ -1.39
RGPD5-203ENST00000393283 A0A1B0GVY2 172 aa6.36□□□□□ -1.39
RGPD5-203ENST00000393283 LRP2P98164 4655 aa6.32□□□□□ -1.4
RGPD5-203ENST00000393283 KRTAP12-1P59990 96 aa6.31□□□□□ -1.4
RGPD5-203ENST00000393283 KIAA1109Q2LD37 5005 aa6.29□□□□□ -1.4
RGPD5-203ENST00000393283 KRTAP15-1Q3LI76 137 aa6.27□□□□□ -1.41
RGPD5-203ENST00000393283 RYR2Q92736 4967 aa6.24□□□□□ -1.41
RGPD5-203ENST00000393283 TNXBP22105 4242 aa6.23□□□□□ -1.41
RGPD5-203ENST00000393283 M0QZ58 72 aa6.22□□□□□ -1.41
RGPD5-203ENST00000393283 RYR1P21817 5038 aa6.22□□□□□ -1.41
RGPD5-203ENST00000393283 KRTAP17-1Q9BYP8 105 aa6.19□□□□□ -1.42
RGPD5-203ENST00000393283 RYR3Q15413 4870 aa6.19□□□□□ -1.42
RGPD5-203ENST00000393283 R4GN34 69 aa6.17□□□□□ -1.42
RGPD5-203ENST00000393283 ABCA13Q86UQ4 5058 aa6.09□□□□□ -1.43
RGPD5-203ENST00000393283 MT1HL1P0DM35 61 aa6.06□□□□□ -1.44
RGPD5-203ENST00000393283 LORP23490 312 aaPredicted RBP6.05□□□□□ -1.44
RGPD5-203ENST00000393283 MUC2Q02817 5179 aa6.02□□□□□ -1.44
RGPD5-203ENST00000393283 PLAC4Q8WY50 150 aa6.02□□□□□ -1.45
RGPD5-203ENST00000393283 EPPK1P58107 5090 aaKnown RBP5.99□□□□□ -1.45
RGPD5-203ENST00000393283 CAMK2N1Q7Z7J9 78 aa5.96□□□□□ -1.45
RGPD5-203ENST00000393283 KRTAP4-5Q9BYR2 181 aa5.94□□□□□ -1.46
RGPD5-203ENST00000393283 LUZP6Q538Z0 58 aa5.87□□□□□ -1.47
RGPD5-203ENST00000393283 J3QL48 77 aa5.84□□□□□ -1.48
RGPD5-203ENST00000393283 KRTAP4-1Q9BYQ7 146 aa5.82□□□□□ -1.48
RGPD5-203ENST00000393283 A0A0A0MQY5 61 aa5.81□□□□□ -1.48
RGPD5-203ENST00000393283 SEC61BP60468 96 aaKnown RBP5.8□□□□□ -1.48
RGPD5-203ENST00000393283 FAT4Q6V0I7 4981 aa5.69□□□□□ -1.5
RGPD5-203ENST00000393283 HERC2O95714 4834 aa5.68□□□□□ -1.5
RGPD5-203ENST00000393283 MUC17Q685J3 4493 aa5.66□□□□□ -1.5
RGPD5-203ENST00000393283 PP632Q6XCG6 107 aa5.61□□□□□ -1.51
RGPD5-203ENST00000393283 TNP1P09430 55 aa5.59□□□□□ -1.51
RGPD5-203ENST00000393283 HERC1Q15751 4861 aa5.57□□□□□ -1.52
RGPD5-203ENST00000393283 PCLOQ9Y6V0 5065 aa5.56□□□□□ -1.52
RGPD5-203ENST00000393283 RNF213Q63HN8 5207 aa5.54□□□□□ -1.52
RGPD5-203ENST00000393283 M0R2T5 61 aa5.53□□□□□ -1.52
RGPD5-203ENST00000393283 KRTAP19-2Q3LHN2 52 aa5.46□□□□□ -1.54
RGPD5-203ENST00000393283 FLGP20930 4061 aaPredicted RBP5.42□□□□□ -1.54
RGPD5-203ENST00000393283 HMCN2Q8NDA2 5059 aa5.36□□□□□ -1.55
RGPD5-203ENST00000393283 UBR4Q5T4S7 5183 aa5.32□□□□□ -1.56
RGPD5-203ENST00000393283 LCE3AQ5TA76 89 aa5.32□□□□□ -1.56
RGPD5-203ENST00000393283 KRTAP10-10P60014 251 aa5.29□□□□□ -1.56
RGPD5-203ENST00000393283 BIRC6Q9NR09 4857 aa5.26□□□□□ -1.57
RGPD5-203ENST00000393283 SPRR5A0A1B0GTR4 108 aa5.24□□□□□ -1.57
RGPD5-203ENST00000393283 KRTAP19-1Q8IUB9 90 aa5.2□□□□□ -1.58
RGPD5-203ENST00000393283 LCE2CQ5TA81 110 aa5.15□□□□□ -1.58
RGPD5-203ENST00000393283 KRTAP23-1A1A580 65 aa5.14□□□□□ -1.59
RGPD5-203ENST00000393283 MT1FP04733 61 aa5.12□□□□□ -1.59
RGPD5-203ENST00000393283 SPRR2GQ9BYE4 73 aa5.11□□□□□ -1.59
RGPD5-203ENST00000393283 MT1HP80294 61 aa5.08□□□□□ -1.6
RGPD5-203ENST00000393283 USH2AO75445 5202 aa5.07□□□□□ -1.6
RGPD5-203ENST00000393283 MT2AP02795 61 aa5.06□□□□□ -1.6
RGPD5-203ENST00000393283 KMT2DO14686 5537 aa5.05□□□□□ -1.6
RGPD5-203ENST00000393283 PRO2289Q9P1D8 64 aa5.02□□□□□ -1.61
RGPD5-203ENST00000393283 KRTAP12-3P60328 96 aa5.01□□□□□ -1.61
RGPD5-203ENST00000393283 KRTAP10-12P60413 245 aa4.97□□□□□ -1.61
RGPD5-203ENST00000393283 KRTAP8-1Q8IUC2 63 aa4.95□□□□□ -1.62
RGPD5-203ENST00000393283 KRTAP9-8Q9BYQ0 159 aa4.94□□□□□ -1.62
RGPD5-203ENST00000393283 KRTAP10-7P60409 375 aaPredicted RBP4.94□□□□□ -1.62
RGPD5-203ENST00000393283 KRTAP10-5P60370 271 aa4.92□□□□□ -1.62
RGPD5-203ENST00000393283 MT1XP80297 61 aa4.92□□□□□ -1.62
RGPD5-203ENST00000393283 MT1BP07438 61 aa4.89□□□□□ -1.63
RGPD5-203ENST00000393283 INE1O15225 51 aa4.86□□□□□ -1.63
RGPD5-203ENST00000393283 FSIP2Q5CZC0 6907 aa4.84□□□□□ -1.63
RGPD5-203ENST00000393283 KRTAP19-8Q3LI54 63 aa4.79□□□□□ -1.64
RGPD5-203ENST00000393283 KRTAP19-5Q3LI72 72 aa4.75□□□□□ -1.65
RGPD5-203ENST00000393283 KRTAP4-8A0A0G2JLE6 195 aa4.72□□□□□ -1.65
RGPD5-203ENST00000393283 KRTAP4-8Q9BYQ9 185 aa4.72□□□□□ -1.65
RGPD5-203ENST00000393283 KRTAP9-3Q9BYQ3 159 aa4.69□□□□□ -1.66
RGPD5-203ENST00000393283 LCE2DQ5TA82 110 aaPredicted RBP4.68□□□□□ -1.66
RGPD5-203ENST00000393283 KRTAP4-7Q9BYR0 210 aa4.66□□□□□ -1.66
RGPD5-203ENST00000393283 LCE3CQ5T5A8 94 aa4.66□□□□□ -1.66
RGPD5-203ENST00000393283 KRTAP9-6A8MVA2 160 aa4.61□□□□□ -1.67
RGPD5-203ENST00000393283 LCE2BO14633 110 aa4.6□□□□□ -1.67
RGPD5-203ENST00000393283 DSTQ03001 7570 aaKnown RBP4.54□□□□□ -1.68
RGPD5-203ENST00000393283 CRCT1Q9UGL9 99 aa4.45□□□□□ -1.7
RGPD5-203ENST00000393283 FCGBPQ9Y6R7 5405 aaPredicted RBP4.44□□□□□ -1.7
RGPD5-203ENST00000393283 MUC12Q9UKN1 5478 aa4.39□□□□□ -1.71
RGPD5-203ENST00000393283 KRTAP19-7Q3SYF9 63 aa4.36□□□□□ -1.71
RGPD5-203ENST00000393283 SYNE1Q8NF91 8797 aaKnown RBP4.36□□□□□ -1.71
RGPD5-203ENST00000393283 OBSCNQ5VST9 7968 aa4.36□□□□□ -1.71
RGPD5-203ENST00000393283 LOC100996750A0A140TA64 210 aa4.32□□□□□ -1.72
RGPD5-203ENST00000393283 KRTAP4-3Q9BYR4 195 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms