RNA–Protein interactions for RNA: ENST00000391248.1

RNU1-78P-201, Transcript of RNA, U1 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU1-78P, Length 165 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-78P-201ENST00000391248 KRTAP20-1Q3LI63 56 aa0.51□□□□□ -2.33
RNU1-78P-201ENST00000391248 LCE3AQ5TA76 89 aa0.51□□□□□ -2.33
RNU1-78P-201ENST00000391248 LINC01549A6NIU2 74 aa0.5□□□□□ -2.33
RNU1-78P-201ENST00000391248 LYNX1G3V0Z9 82 aa0.5□□□□□ -2.33
RNU1-78P-201ENST00000391248 COX6A2Q02221 97 aa0.5□□□□□ -2.33
RNU1-78P-201ENST00000391248 DEFB110Q30KQ9 67 aa0.5□□□□□ -2.33
RNU1-78P-201ENST00000391248 PIGYQ3MUY2 71 aa0.5□□□□□ -2.33
RNU1-78P-201ENST00000391248 CNFNQ9BYD5 112 aa0.5□□□□□ -2.33
RNU1-78P-201ENST00000391248 DSTQ03001 7570 aaKnown RBP0.49□□□□□ -2.33
RNU1-78P-201ENST00000391248 CPSF4LA6NMK7 179 aaKnown RBP0.49□□□□□ -2.33
RNU1-78P-201ENST00000391248 K7EMI3 77 aa0.49□□□□□ -2.33
RNU1-78P-201ENST00000391248 SMR3BP02814 79 aaPredicted RBP0.49□□□□□ -2.33
RNU1-78P-201ENST00000391248 MT1HL1P0DM35 61 aa0.49□□□□□ -2.33
RNU1-78P-201ENST00000391248 Q8IZM0 81 aa0.49□□□□□ -2.33
RNU1-78P-201ENST00000391248 MRPL34Q9BQ48 92 aaKnown RBP0.49□□□□□ -2.33
RNU1-78P-201ENST00000391248 FXYD6Q9H0Q3 95 aa0.49□□□□□ -2.33
RNU1-78P-201ENST00000391248 I3L3M4 83 aa0.48□□□□□ -2.33
RNU1-78P-201ENST00000391248 PRB3Q04118 309 aaPredicted RBP0.48□□□□□ -2.33
RNU1-78P-201ENST00000391248 USMG5Q96IX5 58 aa0.48□□□□□ -2.33
RNU1-78P-201ENST00000391248 KRTAP4-1Q9BYQ7 146 aa0.48□□□□□ -2.33
RNU1-78P-201ENST00000391248 UBL5Q9BZL1 73 aa0.48□□□□□ -2.33
RNU1-78P-201ENST00000391248 FCER1GP30273 86 aa0.47□□□□□ -2.33
RNU1-78P-201ENST00000391248 KRTAP5-1Q6L8H4 278 aa0.47□□□□□ -2.33
RNU1-78P-201ENST00000391248 M0R1W7 72 aa0.46□□□□□ -2.34
RNU1-78P-201ENST00000391248 KRTAP19-2Q3LHN2 52 aa0.46□□□□□ -2.34
RNU1-78P-201ENST00000391248 Q5VSD8 79 aa0.46□□□□□ -2.34
RNU1-78P-201ENST00000391248 KRTAP5-10Q6L8G5 202 aa0.46□□□□□ -2.34
RNU1-78P-201ENST00000391248 KRTAP5-5Q701N2 237 aaPredicted RBP0.46□□□□□ -2.34
RNU1-78P-201ENST00000391248 DEFB105AQ8NG35 78 aa0.46□□□□□ -2.34
RNU1-78P-201ENST00000391248 KCNQ1DNQ9H478 68 aa0.46□□□□□ -2.34
RNU1-78P-201ENST00000391248 HMCN1Q96RW7 5635 aa0.45□□□□□ -2.34
RNU1-78P-201ENST00000391248 AHNAKQ09666 5890 aaKnown RBP0.45□□□□□ -2.34
RNU1-78P-201ENST00000391248 CCL22O00626 93 aa0.45□□□□□ -2.34
RNU1-78P-201ENST00000391248 KLK9Q2XQG4 91 aa0.45□□□□□ -2.34
RNU1-78P-201ENST00000391248 H1FX-AS1Q4G0G2 97 aa0.45□□□□□ -2.34
RNU1-78P-201ENST00000391248 APLNQ9ULZ1 77 aa0.45□□□□□ -2.34
RNU1-78P-201ENST00000391248 ETDCA0A1B0GVM5 59 aa0.44□□□□□ -2.34
RNU1-78P-201ENST00000391248 H0YAA0 97 aa0.44□□□□□ -2.34
RNU1-78P-201ENST00000391248 NDUFA3O95167 84 aa0.44□□□□□ -2.34
RNU1-78P-201ENST00000391248 SPRR1BP22528 89 aa0.44□□□□□ -2.34
RNU1-78P-201ENST00000391248 SPRR1AP35321 89 aa0.44□□□□□ -2.34
RNU1-78P-201ENST00000391248 COX14Q96I36 57 aa0.44□□□□□ -2.34
RNU1-78P-201ENST00000391248 DEFB131BA0A096LNP1 70 aa0.43□□□□□ -2.34
RNU1-78P-201ENST00000391248 KRTAP2-3P0C7H8 128 aa0.43□□□□□ -2.34
RNU1-78P-201ENST00000391248 DEFB114Q30KQ6 69 aa0.43□□□□□ -2.34
RNU1-78P-201ENST00000391248 NCBP2-AS2Q69YL0 99 aa0.43□□□□□ -2.34
RNU1-78P-201ENST00000391248 KRTAP5-7Q6L8G8 165 aa0.43□□□□□ -2.34
RNU1-78P-201ENST00000391248 DEFB108BQ8NET1 73 aa0.43□□□□□ -2.34
RNU1-78P-201ENST00000391248 KRTAP2-4Q9BYR9 128 aa0.43□□□□□ -2.34
RNU1-78P-201ENST00000391248 MUC5BQ9HC84 5762 aaPredicted RBP0.42□□□□□ -2.34
RNU1-78P-201ENST00000391248 MRPL33O75394 65 aaKnown RBP0.42□□□□□ -2.34
RNU1-78P-201ENST00000391248 LINC00158P58513 81 aa0.42□□□□□ -2.34
RNU1-78P-201ENST00000391248 MT1HP80294 61 aa0.42□□□□□ -2.34
RNU1-78P-201ENST00000391248 DEFB136Q30KP8 78 aa0.42□□□□□ -2.34
RNU1-78P-201ENST00000391248 LCE1CQ5T751 118 aa0.42□□□□□ -2.34
RNU1-78P-201ENST00000391248 LCE1BQ5T7P3 118 aa0.42□□□□□ -2.34
RNU1-78P-201ENST00000391248 WFDC13Q8IUB5 93 aa0.42□□□□□ -2.34
RNU1-78P-201ENST00000391248 IAPPP10997 89 aa0.41□□□□□ -2.34
RNU1-78P-201ENST00000391248 DEFB106AQ8N104 65 aa0.41□□□□□ -2.34
RNU1-78P-201ENST00000391248 KRTAP2-1Q9BYU5 128 aa0.41□□□□□ -2.34
RNU1-78P-201ENST00000391248 CDKN2A-AS1Q9UH64 79 aa0.41□□□□□ -2.34
RNU1-78P-201ENST00000391248 MUC5ACP98088 5654 aa0.4□□□□□ -2.34
RNU1-78P-201ENST00000391248 IGIPA6NJ69 53 aa0.4□□□□□ -2.35
RNU1-78P-201ENST00000391248 SNRPGP15A8MWD9 76 aa0.4□□□□□ -2.35
RNU1-78P-201ENST00000391248 CRIP1P50238 77 aa0.4□□□□□ -2.35
RNU1-78P-201ENST00000391248 KRTAP19-6Q3LI70 58 aa0.4□□□□□ -2.35
RNU1-78P-201ENST00000391248 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.4□□□□□ -2.35
RNU1-78P-201ENST00000391248 COX6B2Q6YFQ2 88 aa0.4□□□□□ -2.35
RNU1-78P-201ENST00000391248 NMES1Q9C002 83 aa0.4□□□□□ -2.35
RNU1-78P-201ENST00000391248 H0YGG7 62 aa0.39□□□□□ -2.35
RNU1-78P-201ENST00000391248 DEFB4AO15263 64 aa0.39□□□□□ -2.35
RNU1-78P-201ENST00000391248 PRH1P02810 166 aa0.39□□□□□ -2.35
RNU1-78P-201ENST00000391248 KRTAP5-9P26371 169 aa0.39□□□□□ -2.35
RNU1-78P-201ENST00000391248 PLNP26678 52 aa0.39□□□□□ -2.35
RNU1-78P-201ENST00000391248 MINOS1Q5TGZ0 78 aa0.39□□□□□ -2.35
RNU1-78P-201ENST00000391248 KRTAP5-4Q6L8H1 288 aa0.39□□□□□ -2.35
RNU1-78P-201ENST00000391248 TIMM8BQ9Y5J9 83 aaPredicted RBP0.39□□□□□ -2.35
RNU1-78P-201ENST00000391248 SERF2P84101 59 aa0.38□□□□□ -2.35
RNU1-78P-201ENST00000391248 CMC2Q9NRP2 79 aa0.38□□□□□ -2.35
RNU1-78P-201ENST00000391248 H3BSH0 61 aa0.37□□□□□ -2.35
RNU1-78P-201ENST00000391248 MT1FP04733 61 aa0.37□□□□□ -2.35
RNU1-78P-201ENST00000391248 DEFB130BP0DP73 79 aa0.37□□□□□ -2.35
RNU1-78P-201ENST00000391248 DEFB130AP0DP74 79 aa0.37□□□□□ -2.35
RNU1-78P-201ENST00000391248 MT4P47944 62 aa0.37□□□□□ -2.35
RNU1-78P-201ENST00000391248 C6orf48Q9UBA6 75 aa0.37□□□□□ -2.35
RNU1-78P-201ENST00000391248 SYNE1Q8NF91 8797 aaKnown RBP0.37□□□□□ -2.35
RNU1-78P-201ENST00000391248 H3BUX3 64 aa0.36□□□□□ -2.35
RNU1-78P-201ENST00000391248 MT2AP02795 61 aa0.36□□□□□ -2.35
RNU1-78P-201ENST00000391248 SPRR2EP22531 72 aa0.36□□□□□ -2.35
RNU1-78P-201ENST00000391248 SPRR2BP35325 72 aa0.36□□□□□ -2.35
RNU1-78P-201ENST00000391248 SPRR2AP35326 72 aa0.36□□□□□ -2.35
RNU1-78P-201ENST00000391248 RPS27P42677 84 aaKnown RBP0.36□□□□□ -2.35
RNU1-78P-201ENST00000391248 RPS27LQ71UM5 84 aaKnown RBP0.36□□□□□ -2.35
RNU1-78P-201ENST00000391248 KRTAP19-3Q7Z4W3 81 aa0.36□□□□□ -2.35
RNU1-78P-201ENST00000391248 ABRACLQ9P1F3 81 aa0.36□□□□□ -2.35
RNU1-78P-201ENST00000391248 OBSCNQ5VST9 7968 aa0.35□□□□□ -2.35
RNU1-78P-201ENST00000391248 SPINK4O60575 86 aa0.35□□□□□ -2.35
RNU1-78P-201ENST00000391248 KRTAP5-8O75690 187 aa0.35□□□□□ -2.35
RNU1-78P-201ENST00000391248 SPINK6Q6UWN8 80 aa0.35□□□□□ -2.35
RNU1-78P-201ENST00000391248 TOMM5Q8N4H5 51 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms