RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 DMAC1Q96GE9 116 aa4.4□□□□□ -1.71
TRBV28-201ENST00000390400 ZNF706Q9Y5V0 76 aaPredicted RBP4.4□□□□□ -1.71
TRBV28-201ENST00000390400 UQCR11O14957 56 aa4.39□□□□□ -1.71
TRBV28-201ENST00000390400 ZNF861PO60384 105 aa4.38□□□□□ -1.71
TRBV28-201ENST00000390400 KRTAP10-4P60372 401 aaPredicted RBP4.38□□□□□ -1.71
TRBV28-201ENST00000390400 PRLHP81277 87 aa4.38□□□□□ -1.71
TRBV28-201ENST00000390400 KRTAP13-1Q8IUC0 172 aa4.38□□□□□ -1.71
TRBV28-201ENST00000390400 SRRM2Q9UQ35 2752 aaKnown RBP4.38□□□□□ -1.71
TRBV28-201ENST00000390400 FLG2Q5D862 2391 aaPredicted RBP4.38□□□□□ -1.71
TRBV28-201ENST00000390400 LINC00483Q53H64 154 aa4.37□□□□□ -1.71
TRBV28-201ENST00000390400 A0A1B0GU69 56 aa4.36□□□□□ -1.71
TRBV28-201ENST00000390400 DEFB116Q30KQ4 102 aa4.36□□□□□ -1.71
TRBV28-201ENST00000390400 SPINK6Q6UWN8 80 aa4.36□□□□□ -1.71
TRBV28-201ENST00000390400 Q96NJ1 140 aa4.36□□□□□ -1.71
TRBV28-201ENST00000390400 KRTAP17-1Q9BYP8 105 aa4.36□□□□□ -1.71
TRBV28-201ENST00000390400 IGHV6-1A0A0B4J1U7 121 aa4.35□□□□□ -1.71
TRBV28-201ENST00000390400 PCOTHQ58A44 107 aa4.35□□□□□ -1.71
TRBV28-201ENST00000390400 FAT1Q14517 4588 aa4.34□□□□□ -1.71
TRBV28-201ENST00000390400 KRTAP13-3Q3SY46 172 aa4.34□□□□□ -1.71
TRBV28-201ENST00000390400 NDUFAF8A1L188 74 aa4.33□□□□□ -1.72
TRBV28-201ENST00000390400 MIR22HGQ0VDD5 57 aa4.33□□□□□ -1.72
TRBV28-201ENST00000390400 PKHD1L1Q86WI1 4243 aa4.32□□□□□ -1.72
TRBV28-201ENST00000390400 HERC2O95714 4834 aa4.3□□□□□ -1.72
TRBV28-201ENST00000390400 KRTAP9-8Q9BYQ0 159 aa4.29□□□□□ -1.72
TRBV28-201ENST00000390400 KRTAP1-4P0C5Y4 121 aa4.28□□□□□ -1.72
TRBV28-201ENST00000390400 ANAPC11Q9NYG5 84 aa4.28□□□□□ -1.72
TRBV28-201ENST00000390400 DMBT1Q9UGM3 2413 aaPredicted RBP4.25□□□□□ -1.73
TRBV28-201ENST00000390400 ABCA13Q86UQ4 5058 aa4.23□□□□□ -1.73
TRBV28-201ENST00000390400 A0A0G2JQZ4 141 aa4.23□□□□□ -1.73
TRBV28-201ENST00000390400 KRTAP13-2Q52LG2 175 aa4.23□□□□□ -1.73
TRBV28-201ENST00000390400 SSBP3-AS1Q7Z2R9 100 aa4.23□□□□□ -1.73
TRBV28-201ENST00000390400 TYMSOSQ8TAI1 123 aa4.23□□□□□ -1.73
TRBV28-201ENST00000390400 KRTAP2-2Q9BYT5 123 aa4.22□□□□□ -1.73
TRBV28-201ENST00000390400 KRTAP10-8P60410 259 aa4.21□□□□□ -1.74
TRBV28-201ENST00000390400 MYCBP2O75592 4640 aa4.21□□□□□ -1.74
TRBV28-201ENST00000390400 MT1HL1P0DM35 61 aa4.2□□□□□ -1.74
TRBV28-201ENST00000390400 Q5W150 140 aa4.2□□□□□ -1.74
TRBV28-201ENST00000390400 CSAG1Q6PB30 78 aa4.19□□□□□ -1.74
TRBV28-201ENST00000390400 LRP1Q07954 4544 aaKnown RBP4.19□□□□□ -1.74
TRBV28-201ENST00000390400 FAT3Q8TDW7 4589 aa4.18□□□□□ -1.74
TRBV28-201ENST00000390400 KRTAP25-1Q3LHN0 102 aa4.18□□□□□ -1.74
TRBV28-201ENST00000390400 LINC00304Q8N9R0 145 aa4.18□□□□□ -1.74
TRBV28-201ENST00000390400 PCLOQ9Y6V0 5065 aa4.18□□□□□ -1.74
TRBV28-201ENST00000390400 TNXBP22105 4242 aa4.17□□□□□ -1.74
TRBV28-201ENST00000390400 A8MUU9 505 aa4.16□□□□□ -1.74
TRBV28-201ENST00000390400 ROMO1P60602 79 aa4.16□□□□□ -1.74
TRBV28-201ENST00000390400 ADM2Q7Z4H4 148 aa4.16□□□□□ -1.74
TRBV28-201ENST00000390400 K7ERS5 55 aa4.15□□□□□ -1.75
TRBV28-201ENST00000390400 SPINK1P00995 79 aa4.14□□□□□ -1.75
TRBV28-201ENST00000390400 LCE1FQ5T754 118 aa4.13□□□□□ -1.75
TRBV28-201ENST00000390400 MT3P25713 68 aa4.12□□□□□ -1.75
TRBV28-201ENST00000390400 RPS29P62273 56 aaKnown RBP4.12□□□□□ -1.75
TRBV28-201ENST00000390400 COX6B2Q6YFQ2 88 aa4.07□□□□□ -1.76
TRBV28-201ENST00000390400 A0A1B0GU33 70 aa4.04□□□□□ -1.76
TRBV28-201ENST00000390400 H0YAA0 97 aa4.02□□□□□ -1.77
TRBV28-201ENST00000390400 H1FX-AS1Q4G0G2 97 aa4.02□□□□□ -1.77
TRBV28-201ENST00000390400 HERC1Q15751 4861 aa4□□□□□ -1.77
TRBV28-201ENST00000390400 TPRXLQ17RH7 258 aa3.96□□□□□ -1.78
TRBV28-201ENST00000390400 C9orf92A6NGG3 77 aa3.95□□□□□ -1.78
TRBV28-201ENST00000390400 HMCN2Q8NDA2 5059 aa3.92□□□□□ -1.78
TRBV28-201ENST00000390400 RPL37P61927 97 aaKnown RBP3.92□□□□□ -1.78
TRBV28-201ENST00000390400 C20orf166-AS1Q96NR2 134 aa3.91□□□□□ -1.78
TRBV28-201ENST00000390400 P0C880 135 aa3.9□□□□□ -1.79
TRBV28-201ENST00000390400 KRTAP5-3Q6L8H2 238 aa3.89□□□□□ -1.79
TRBV28-201ENST00000390400 KRTAP10-12P60413 245 aa3.87□□□□□ -1.79
TRBV28-201ENST00000390400 LRP2P98164 4655 aa3.87□□□□□ -1.79
TRBV28-201ENST00000390400 LPAP08519 4548 aa3.86□□□□□ -1.79
TRBV28-201ENST00000390400 SPINT4Q6UDR6 99 aa3.86□□□□□ -1.79
TRBV28-201ENST00000390400 LCE3CQ5T5A8 94 aa3.83□□□□□ -1.8
TRBV28-201ENST00000390400 CRIPTQ9P021 101 aa3.83□□□□□ -1.8
TRBV28-201ENST00000390400 UBR4Q5T4S7 5183 aa3.82□□□□□ -1.8
TRBV28-201ENST00000390400 RNF213Q63HN8 5207 aa3.77□□□□□ -1.81
TRBV28-201ENST00000390400 MUC17Q685J3 4493 aa3.77□□□□□ -1.81
TRBV28-201ENST00000390400 KRTAP10-6P60371 365 aaPredicted RBP3.74□□□□□ -1.81
TRBV28-201ENST00000390400 KRTAP4-1Q9BYQ7 146 aa3.74□□□□□ -1.81
TRBV28-201ENST00000390400 M0QZ58 72 aa3.72□□□□□ -1.81
TRBV28-201ENST00000390400 S4R3F8 94 aa3.71□□□□□ -1.82
TRBV28-201ENST00000390400 MUC2Q02817 5179 aa3.68□□□□□ -1.82
TRBV28-201ENST00000390400 CAMK2N1Q7Z7J9 78 aa3.66□□□□□ -1.82
TRBV28-201ENST00000390400 LUZP6Q538Z0 58 aa3.64□□□□□ -1.83
TRBV28-201ENST00000390400 KRTAP13-4Q3LI77 160 aa3.63□□□□□ -1.83
TRBV28-201ENST00000390400 PP632Q6XCG6 107 aa3.63□□□□□ -1.83
TRBV28-201ENST00000390400 KRTAP12-1P59990 96 aa3.62□□□□□ -1.83
TRBV28-201ENST00000390400 KRTAP19-2Q3LHN2 52 aa3.62□□□□□ -1.83
TRBV28-201ENST00000390400 FLGP20930 4061 aaPredicted RBP3.61□□□□□ -1.83
TRBV28-201ENST00000390400 A0A0D9SG42 100 aa3.58□□□□□ -1.84
TRBV28-201ENST00000390400 KRTAP12-2P59991 146 aa3.57□□□□□ -1.84
TRBV28-201ENST00000390400 KRTAP10-5P60370 271 aa3.57□□□□□ -1.84
TRBV28-201ENST00000390400 C10orf95Q9H7T3 257 aa3.57□□□□□ -1.84
TRBV28-201ENST00000390400 FAT4Q6V0I7 4981 aa3.57□□□□□ -1.84
TRBV28-201ENST00000390400 PLAC4Q8WY50 150 aa3.56□□□□□ -1.84
TRBV28-201ENST00000390400 MT1HP80294 61 aa3.54□□□□□ -1.84
TRBV28-201ENST00000390400 M0R2T5 61 aa3.53□□□□□ -1.84
TRBV28-201ENST00000390400 LCE3EQ5T5B0 92 aa3.51□□□□□ -1.85
TRBV28-201ENST00000390400 KRTAP10-7P60409 375 aaPredicted RBP3.42□□□□□ -1.86
TRBV28-201ENST00000390400 R4GN34 69 aa3.4□□□□□ -1.87
TRBV28-201ENST00000390400 SPRR5A0A1B0GTR4 108 aa3.39□□□□□ -1.87
TRBV28-201ENST00000390400 LCE1EQ5T753 118 aa3.39□□□□□ -1.87
TRBV28-201ENST00000390400 MT2AP02795 61 aa3.37□□□□□ -1.87
TRBV28-201ENST00000390400 MT1FP04733 61 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms