RNA–Protein interactions for RNA: ENST00000389939.2

MS4A1-202, Transcript of membrane spanning 4-domains A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MS4A1, Length 3,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1-202ENST00000389939 ANK3Q12955 4377 aaKnown RBP2.47□□□□□ -2.01
MS4A1-202ENST00000389939 KRTAP13-2Q52LG2 175 aa2.46□□□□□ -2.02
MS4A1-202ENST00000389939 KRTAP10-2P60368 255 aa2.43□□□□□ -2.02
MS4A1-202ENST00000389939 KRTAP13-4Q3LI77 160 aa2.43□□□□□ -2.02
MS4A1-202ENST00000389939 DNHD1Q96M86 4753 aa2.43□□□□□ -2.02
MS4A1-202ENST00000389939 VPS13DQ5THJ4 4388 aa2.43□□□□□ -2.02
MS4A1-202ENST00000389939 KRTAP3-1Q9BYR8 98 aa2.41□□□□□ -2.02
MS4A1-202ENST00000389939 CMYA5Q8N3K9 4069 aa2.41□□□□□ -2.02
MS4A1-202ENST00000389939 KRTAP10-8P60410 259 aa2.4□□□□□ -2.02
MS4A1-202ENST00000389939 S4R3F8 94 aa2.4□□□□□ -2.03
MS4A1-202ENST00000389939 Q6ZRN7 208 aaPredicted RBP2.39□□□□□ -2.03
MS4A1-202ENST00000389939 KRTAP12-2P59991 146 aa2.38□□□□□ -2.03
MS4A1-202ENST00000389939 KRTAP10-1P60331 282 aa2.38□□□□□ -2.03
MS4A1-202ENST00000389939 FRAS1Q86XX4 4008 aa2.37□□□□□ -2.03
MS4A1-202ENST00000389939 PRKDCP78527 4128 aaKnown RBP2.37□□□□□ -2.03
MS4A1-202ENST00000389939 DNAH3Q8TD57 4116 aa2.37□□□□□ -2.03
MS4A1-202ENST00000389939 DNAH8Q96JB1 4490 aa2.37□□□□□ -2.03
MS4A1-202ENST00000389939 KRTAP9-3Q9BYQ3 159 aa2.35□□□□□ -2.03
MS4A1-202ENST00000389939 KRTAP9-7A8MTY7 169 aa2.35□□□□□ -2.03
MS4A1-202ENST00000389939 CAMK2N1Q7Z7J9 78 aa2.35□□□□□ -2.03
MS4A1-202ENST00000389939 PLAC4Q8WY50 150 aa2.35□□□□□ -2.03
MS4A1-202ENST00000389939 DNAH7Q8WXX0 4024 aa2.35□□□□□ -2.03
MS4A1-202ENST00000389939 DNAH17Q9UFH2 4485 aa2.34□□□□□ -2.03
MS4A1-202ENST00000389939 LCE4AQ5TA78 99 aa2.34□□□□□ -2.04
MS4A1-202ENST00000389939 DNAH9Q9NYC9 4486 aa2.33□□□□□ -2.04
MS4A1-202ENST00000389939 DNAH6Q9C0G6 4158 aa2.32□□□□□ -2.04
MS4A1-202ENST00000389939 HMCN1Q96RW7 5635 aa2.32□□□□□ -2.04
MS4A1-202ENST00000389939 M0QZ58 72 aa2.32□□□□□ -2.04
MS4A1-202ENST00000389939 HUWE1Q7Z6Z7 4374 aaKnown RBP2.32□□□□□ -2.04
MS4A1-202ENST00000389939 KRTAP10-6P60371 365 aaPredicted RBP2.32□□□□□ -2.04
MS4A1-202ENST00000389939 DYNC2H1Q8NCM8 4307 aaKnown RBP2.31□□□□□ -2.04
MS4A1-202ENST00000389939 KRTAP1-4P0C5Y4 121 aa2.31□□□□□ -2.04
MS4A1-202ENST00000389939 MYCBP2O75592 4640 aa2.3□□□□□ -2.04
MS4A1-202ENST00000389939 DNAH11Q96DT5 4516 aa2.29□□□□□ -2.04
MS4A1-202ENST00000389939 KRTAP12-1P59990 96 aa2.29□□□□□ -2.04
MS4A1-202ENST00000389939 R4GN34 69 aa2.29□□□□□ -2.04
MS4A1-202ENST00000389939 PLECQ15149 4684 aaKnown RBP2.26□□□□□ -2.05
MS4A1-202ENST00000389939 PRO2289Q9P1D8 64 aa2.26□□□□□ -2.05
MS4A1-202ENST00000389939 LRP1BQ9NZR2 4599 aa2.24□□□□□ -2.05
MS4A1-202ENST00000389939 HECTD4Q9Y4D8 3996 aa2.24□□□□□ -2.05
MS4A1-202ENST00000389939 KMT2AQ03164 3969 aa2.23□□□□□ -2.05
MS4A1-202ENST00000389939 SPRR5A0A1B0GTR4 108 aa2.22□□□□□ -2.05
MS4A1-202ENST00000389939 FAT1Q14517 4588 aa2.2□□□□□ -2.06
MS4A1-202ENST00000389939 DNAH2Q9P225 4427 aa2.2□□□□□ -2.06
MS4A1-202ENST00000389939 STARD9Q9P2P6 4700 aa2.17□□□□□ -2.06
MS4A1-202ENST00000389939 SACSQ9NZJ4 4579 aa2.17□□□□□ -2.06
MS4A1-202ENST00000389939 FAT3Q8TDW7 4589 aa2.17□□□□□ -2.06
MS4A1-202ENST00000389939 APOBP04114 4563 aaKnown RBP2.17□□□□□ -2.06
MS4A1-202ENST00000389939 INE1O15225 51 aa2.16□□□□□ -2.06
MS4A1-202ENST00000389939 RYR3Q15413 4870 aa2.16□□□□□ -2.06
MS4A1-202ENST00000389939 RYR2Q92736 4967 aa2.16□□□□□ -2.06
MS4A1-202ENST00000389939 LRP1Q07954 4544 aaKnown RBP2.14□□□□□ -2.07
MS4A1-202ENST00000389939 A0A1B0GVY2 172 aa2.13□□□□□ -2.07
MS4A1-202ENST00000389939 VPS13BQ7Z7G8 4022 aa2.13□□□□□ -2.07
MS4A1-202ENST00000389939 KMT2CQ8NEZ4 4911 aaKnown RBP2.13□□□□□ -2.07
MS4A1-202ENST00000389939 KRTAP23-1A1A580 65 aa2.11□□□□□ -2.07
MS4A1-202ENST00000389939 FAT2Q9NYQ8 4349 aa2.11□□□□□ -2.07
MS4A1-202ENST00000389939 BIRC6Q9NR09 4857 aa2.11□□□□□ -2.07
MS4A1-202ENST00000389939 HSPG2P98160 4391 aa2.1□□□□□ -2.07
MS4A1-202ENST00000389939 DNAH5Q8TE73 4624 aa2.1□□□□□ -2.07
MS4A1-202ENST00000389939 DYNC1H1Q14204 4646 aaKnown RBP2.09□□□□□ -2.08
MS4A1-202ENST00000389939 RPS29P62273 56 aaKnown RBP2.08□□□□□ -2.08
MS4A1-202ENST00000389939 PKHD1L1Q86WI1 4243 aa2.08□□□□□ -2.08
MS4A1-202ENST00000389939 TNP1P09430 55 aa2.06□□□□□ -2.08
MS4A1-202ENST00000389939 Q5VSD8 79 aa2.06□□□□□ -2.08
MS4A1-202ENST00000389939 PP632Q6XCG6 107 aa2.06□□□□□ -2.08
MS4A1-202ENST00000389939 HERC2O95714 4834 aa2.06□□□□□ -2.08
MS4A1-202ENST00000389939 HYDINQ4G0P3 5121 aa2.06□□□□□ -2.08
MS4A1-202ENST00000389939 LRP2P98164 4655 aa2.05□□□□□ -2.08
MS4A1-202ENST00000389939 FLGP20930 4061 aaPredicted RBP2.05□□□□□ -2.08
MS4A1-202ENST00000389939 EPPK1P58107 5090 aaKnown RBP2.04□□□□□ -2.08
MS4A1-202ENST00000389939 PKHD1P08F94 4074 aa2.04□□□□□ -2.08
MS4A1-202ENST00000389939 TNXBP22105 4242 aa2.03□□□□□ -2.08
MS4A1-202ENST00000389939 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.03□□□□□ -2.08
MS4A1-202ENST00000389939 LPAP08519 4548 aa2.03□□□□□ -2.08
MS4A1-202ENST00000389939 PKD1P98161 4303 aa2.03□□□□□ -2.09
MS4A1-202ENST00000389939 KRTAP5-9P26371 169 aa1.99□□□□□ -2.09
MS4A1-202ENST00000389939 M0R2T5 61 aa1.98□□□□□ -2.09
MS4A1-202ENST00000389939 RYR1P21817 5038 aa1.96□□□□□ -2.1
MS4A1-202ENST00000389939 PCLOQ9Y6V0 5065 aa1.95□□□□□ -2.1
MS4A1-202ENST00000389939 KRTAP10-4P60372 401 aaPredicted RBP1.95□□□□□ -2.1
MS4A1-202ENST00000389939 OBSCNQ5VST9 7968 aa1.93□□□□□ -2.1
MS4A1-202ENST00000389939 LCE3AQ5TA76 89 aa1.93□□□□□ -2.1
MS4A1-202ENST00000389939 MUC2Q02817 5179 aa1.92□□□□□ -2.1
MS4A1-202ENST00000389939 KIAA1109Q2LD37 5005 aa1.92□□□□□ -2.1
MS4A1-202ENST00000389939 ABCA13Q86UQ4 5058 aa1.91□□□□□ -2.1
MS4A1-202ENST00000389939 KRTAP4-1Q9BYQ7 146 aa1.9□□□□□ -2.11
MS4A1-202ENST00000389939 MT1HL1P0DM35 61 aa1.87□□□□□ -2.11
MS4A1-202ENST00000389939 SYNE1Q8NF91 8797 aaKnown RBP1.85□□□□□ -2.11
MS4A1-202ENST00000389939 KRTAP10-10P60014 251 aa1.84□□□□□ -2.11
MS4A1-202ENST00000389939 FAT4Q6V0I7 4981 aa1.83□□□□□ -2.12
MS4A1-202ENST00000389939 HMCN2Q8NDA2 5059 aa1.81□□□□□ -2.12
MS4A1-202ENST00000389939 KRTAP12-3P60328 96 aa1.8□□□□□ -2.12
MS4A1-202ENST00000389939 CRCT1Q9UGL9 99 aa1.79□□□□□ -2.12
MS4A1-202ENST00000389939 MUC17Q685J3 4493 aa1.78□□□□□ -2.12
MS4A1-202ENST00000389939 HERC1Q15751 4861 aa1.77□□□□□ -2.13
MS4A1-202ENST00000389939 KRTAP10-12P60413 245 aa1.75□□□□□ -2.13
MS4A1-202ENST00000389939 KMT2DO14686 5537 aa1.75□□□□□ -2.13
MS4A1-202ENST00000389939 RNF213Q63HN8 5207 aa1.74□□□□□ -2.13
MS4A1-202ENST00000389939 KRTAP5-11Q6L8G4 156 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms