RNA–Protein interactions for RNA: ENST00000389924.6

DDX42-202, Transcript of DEAD-box helicase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene DDX42, Length 3,939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-202ENST00000389924 M0QZ58 72 aa9.3□□□□□ -0.92
DDX42-202ENST00000389924 R4GN34 69 aa9.3□□□□□ -0.92
DDX42-202ENST00000389924 PKD1P98161 4303 aa9.27□□□□□ -0.93
DDX42-202ENST00000389924 A0A1B0GVY2 172 aa9.26□□□□□ -0.93
DDX42-202ENST00000389924 NDUFAF8A1L188 74 aa9.25□□□□□ -0.93
DDX42-202ENST00000389924 KRTAP10-6P60371 365 aaPredicted RBP9.25□□□□□ -0.93
DDX42-202ENST00000389924 MYCBP2O75592 4640 aa9.23□□□□□ -0.93
DDX42-202ENST00000389924 TPRXLQ17RH7 258 aa9.2□□□□□ -0.94
DDX42-202ENST00000389924 DYNC1H1Q14204 4646 aaKnown RBP9.18□□□□□ -0.94
DDX42-202ENST00000389924 SACSQ9NZJ4 4579 aa9.18□□□□□ -0.94
DDX42-202ENST00000389924 KRTAP12-2P59991 146 aa9.18□□□□□ -0.94
DDX42-202ENST00000389924 KRTAP10-4P60372 401 aaPredicted RBP9.16□□□□□ -0.94
DDX42-202ENST00000389924 KRTAP3-3Q9BYR6 98 aa9.15□□□□□ -0.94
DDX42-202ENST00000389924 J3QL48 77 aa9.13□□□□□ -0.95
DDX42-202ENST00000389924 CAMK2N1Q7Z7J9 78 aa9.11□□□□□ -0.95
DDX42-202ENST00000389924 KMT2CQ8NEZ4 4911 aaKnown RBP9.09□□□□□ -0.95
DDX42-202ENST00000389924 KRTAP3-2Q9BYR7 98 aa9.08□□□□□ -0.96
DDX42-202ENST00000389924 LRP1Q07954 4544 aaKnown RBP9.04□□□□□ -0.96
DDX42-202ENST00000389924 KRTAP12-1P59990 96 aa9□□□□□ -0.97
DDX42-202ENST00000389924 APOBP04114 4563 aaKnown RBP8.96□□□□□ -0.98
DDX42-202ENST00000389924 KRTAP21-3Q3LHN1 58 aa8.94□□□□□ -0.98
DDX42-202ENST00000389924 SEC61BP60468 96 aaKnown RBP8.92□□□□□ -0.98
DDX42-202ENST00000389924 FAT3Q8TDW7 4589 aa8.9□□□□□ -0.98
DDX42-202ENST00000389924 LUZP6Q538Z0 58 aa8.86□□□□□ -0.99
DDX42-202ENST00000389924 RYR2Q92736 4967 aa8.85□□□□□ -0.99
DDX42-202ENST00000389924 MT1HL1P0DM35 61 aa8.77□□□□□ -1.01
DDX42-202ENST00000389924 KIAA1109Q2LD37 5005 aa8.74□□□□□ -1.01
DDX42-202ENST00000389924 PLAC4Q8WY50 150 aa8.71□□□□□ -1.02
DDX42-202ENST00000389924 RYR3Q15413 4870 aa8.7□□□□□ -1.02
DDX42-202ENST00000389924 PKHD1L1Q86WI1 4243 aa8.67□□□□□ -1.02
DDX42-202ENST00000389924 HSPG2P98160 4391 aa8.66□□□□□ -1.02
DDX42-202ENST00000389924 RYR1P21817 5038 aa8.66□□□□□ -1.02
DDX42-202ENST00000389924 KRTAP15-1Q3LI76 137 aa8.64□□□□□ -1.03
DDX42-202ENST00000389924 LRP2P98164 4655 aa8.63□□□□□ -1.03
DDX42-202ENST00000389924 KRTAP17-1Q9BYP8 105 aa8.61□□□□□ -1.03
DDX42-202ENST00000389924 M0R2T5 61 aa8.6□□□□□ -1.03
DDX42-202ENST00000389924 LORP23490 312 aaPredicted RBP8.55□□□□□ -1.04
DDX42-202ENST00000389924 KRTAP4-5Q9BYR2 181 aa8.54□□□□□ -1.04
DDX42-202ENST00000389924 TNXBP22105 4242 aa8.48□□□□□ -1.05
DDX42-202ENST00000389924 EPPK1P58107 5090 aaKnown RBP8.46□□□□□ -1.05
DDX42-202ENST00000389924 A0A0A0MQY5 61 aa8.44□□□□□ -1.06
DDX42-202ENST00000389924 TNP1P09430 55 aa8.41□□□□□ -1.06
DDX42-202ENST00000389924 LPAP08519 4548 aa8.41□□□□□ -1.06
DDX42-202ENST00000389924 PP632Q6XCG6 107 aa8.34□□□□□ -1.08
DDX42-202ENST00000389924 ABCA13Q86UQ4 5058 aa8.3□□□□□ -1.08
DDX42-202ENST00000389924 KRTAP4-1Q9BYQ7 146 aa8.27□□□□□ -1.09
DDX42-202ENST00000389924 MUC2Q02817 5179 aa8.05□□□□□ -1.12
DDX42-202ENST00000389924 HERC2O95714 4834 aa8.04□□□□□ -1.12
DDX42-202ENST00000389924 KRTAP10-10P60014 251 aa8.01□□□□□ -1.13
DDX42-202ENST00000389924 HERC1Q15751 4861 aa7.81□□□□□ -1.16
DDX42-202ENST00000389924 LCE3AQ5TA76 89 aa7.67□□□□□ -1.18
DDX42-202ENST00000389924 MUC17Q685J3 4493 aa7.65□□□□□ -1.18
DDX42-202ENST00000389924 FAT4Q6V0I7 4981 aa7.64□□□□□ -1.19
DDX42-202ENST00000389924 PCLOQ9Y6V0 5065 aa7.63□□□□□ -1.19
DDX42-202ENST00000389924 RNF213Q63HN8 5207 aa7.6□□□□□ -1.19
DDX42-202ENST00000389924 BIRC6Q9NR09 4857 aa7.58□□□□□ -1.2
DDX42-202ENST00000389924 KRTAP19-2Q3LHN2 52 aa7.57□□□□□ -1.2
DDX42-202ENST00000389924 KRTAP23-1A1A580 65 aa7.46□□□□□ -1.21
DDX42-202ENST00000389924 KRTAP19-1Q8IUB9 90 aa7.43□□□□□ -1.22
DDX42-202ENST00000389924 SPRR2GQ9BYE4 73 aa7.42□□□□□ -1.22
DDX42-202ENST00000389924 UBR4Q5T4S7 5183 aa7.42□□□□□ -1.22
DDX42-202ENST00000389924 FLGP20930 4061 aaPredicted RBP7.41□□□□□ -1.22
DDX42-202ENST00000389924 MT1FP04733 61 aa7.38□□□□□ -1.23
DDX42-202ENST00000389924 MT1HP80294 61 aa7.38□□□□□ -1.23
DDX42-202ENST00000389924 KRTAP10-12P60413 245 aa7.38□□□□□ -1.23
DDX42-202ENST00000389924 HMCN2Q8NDA2 5059 aa7.38□□□□□ -1.23
DDX42-202ENST00000389924 KRTAP12-3P60328 96 aa7.36□□□□□ -1.23
DDX42-202ENST00000389924 MT2AP02795 61 aa7.35□□□□□ -1.23
DDX42-202ENST00000389924 PRO2289Q9P1D8 64 aa7.33□□□□□ -1.24
DDX42-202ENST00000389924 LCE2CQ5TA81 110 aa7.29□□□□□ -1.24
DDX42-202ENST00000389924 SPRR5A0A1B0GTR4 108 aa7.19□□□□□ -1.26
DDX42-202ENST00000389924 KRTAP8-1Q8IUC2 63 aa7.12□□□□□ -1.27
DDX42-202ENST00000389924 KRTAP10-7P60409 375 aaPredicted RBP7.07□□□□□ -1.28
DDX42-202ENST00000389924 KRTAP9-8Q9BYQ0 159 aa7.07□□□□□ -1.28
DDX42-202ENST00000389924 MT1XP80297 61 aa7.04□□□□□ -1.28
DDX42-202ENST00000389924 KRTAP10-5P60370 271 aa7.03□□□□□ -1.28
DDX42-202ENST00000389924 INE1O15225 51 aa7.02□□□□□ -1.29
DDX42-202ENST00000389924 MT1BP07438 61 aa7.01□□□□□ -1.29
DDX42-202ENST00000389924 KRTAP19-8Q3LI54 63 aa6.95□□□□□ -1.3
DDX42-202ENST00000389924 KRTAP19-5Q3LI72 72 aa6.9□□□□□ -1.3
DDX42-202ENST00000389924 USH2AO75445 5202 aa6.77□□□□□ -1.33
DDX42-202ENST00000389924 KRTAP4-8A0A0G2JLE6 195 aa6.76□□□□□ -1.33
DDX42-202ENST00000389924 KRTAP4-8Q9BYQ9 185 aa6.76□□□□□ -1.33
DDX42-202ENST00000389924 KRTAP9-3Q9BYQ3 159 aa6.74□□□□□ -1.33
DDX42-202ENST00000389924 LCE3CQ5T5A8 94 aa6.74□□□□□ -1.33
DDX42-202ENST00000389924 FSIP2Q5CZC0 6907 aa6.73□□□□□ -1.33
DDX42-202ENST00000389924 KMT2DO14686 5537 aa6.73□□□□□ -1.33
DDX42-202ENST00000389924 CRCT1Q9UGL9 99 aa6.69□□□□□ -1.34
DDX42-202ENST00000389924 KRTAP4-7Q9BYR0 210 aa6.58□□□□□ -1.36
DDX42-202ENST00000389924 LCE2BO14633 110 aa6.57□□□□□ -1.36
DDX42-202ENST00000389924 KRTAP9-6A8MVA2 160 aa6.3□□□□□ -1.4
DDX42-202ENST00000389924 DSTQ03001 7570 aaKnown RBP6.25□□□□□ -1.41
DDX42-202ENST00000389924 SYNE1Q8NF91 8797 aaKnown RBP6.21□□□□□ -1.41
DDX42-202ENST00000389924 KRTAP19-7Q3SYF9 63 aa6.19□□□□□ -1.42
DDX42-202ENST00000389924 OBSCNQ5VST9 7968 aa6.19□□□□□ -1.42
DDX42-202ENST00000389924 FCGBPQ9Y6R7 5405 aaPredicted RBP6.17□□□□□ -1.42
DDX42-202ENST00000389924 LCE2AQ5TA79 106 aaPredicted RBP6.16□□□□□ -1.42
DDX42-202ENST00000389924 MT1GP13640 62 aa6.16□□□□□ -1.42
DDX42-202ENST00000389924 MT1LQ93083 61 aa6.15□□□□□ -1.43
DDX42-202ENST00000389924 LOC100996750A0A140TA64 210 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms