RNA–Protein interactions for RNA: ENST00000389759.7

PKP4-202, Transcript of plakophilin 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PKP4, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-202ENST00000389759 DNAH7Q8WXX0 4024 aa4.02□□□□□ -1.77
PKP4-202ENST00000389759 DNAH11Q96DT5 4516 aa4.01□□□□□ -1.77
PKP4-202ENST00000389759 STARD9Q9P2P6 4700 aa4□□□□□ -1.77
PKP4-202ENST00000389759 DNAH9Q9NYC9 4486 aa4□□□□□ -1.77
PKP4-202ENST00000389759 DNAH8Q96JB1 4490 aa3.95□□□□□ -1.78
PKP4-202ENST00000389759 FRAS1Q86XX4 4008 aa3.94□□□□□ -1.78
PKP4-202ENST00000389759 DNAH1Q9P2D7 4330 aa3.93□□□□□ -1.78
PKP4-202ENST00000389759 FAT1Q14517 4588 aa3.93□□□□□ -1.78
PKP4-202ENST00000389759 CMYA5Q8N3K9 4069 aa3.9□□□□□ -1.78
PKP4-202ENST00000389759 MYCBP2O75592 4640 aa3.9□□□□□ -1.79
PKP4-202ENST00000389759 MT1HL1P0DM35 61 aa3.9□□□□□ -1.79
PKP4-202ENST00000389759 KRTAP10-4P60372 401 aaPredicted RBP3.89□□□□□ -1.79
PKP4-202ENST00000389759 INE1O15225 51 aa3.88□□□□□ -1.79
PKP4-202ENST00000389759 DNAH6Q9C0G6 4158 aa3.87□□□□□ -1.79
PKP4-202ENST00000389759 LRP1BQ9NZR2 4599 aa3.87□□□□□ -1.79
PKP4-202ENST00000389759 DNAH5Q8TE73 4624 aa3.84□□□□□ -1.79
PKP4-202ENST00000389759 LCE2DQ5TA82 110 aaPredicted RBP3.84□□□□□ -1.79
PKP4-202ENST00000389759 VPS13DQ5THJ4 4388 aa3.83□□□□□ -1.8
PKP4-202ENST00000389759 FAT3Q8TDW7 4589 aa3.81□□□□□ -1.8
PKP4-202ENST00000389759 DNAH17Q9UFH2 4485 aa3.81□□□□□ -1.8
PKP4-202ENST00000389759 HYDINQ4G0P3 5121 aa3.81□□□□□ -1.8
PKP4-202ENST00000389759 KRTAP23-1A1A580 65 aa3.79□□□□□ -1.8
PKP4-202ENST00000389759 DNAH2Q9P225 4427 aa3.79□□□□□ -1.8
PKP4-202ENST00000389759 KRTAP4-5Q9BYR2 181 aa3.78□□□□□ -1.8
PKP4-202ENST00000389759 PKHD1P08F94 4074 aa3.77□□□□□ -1.81
PKP4-202ENST00000389759 ALMS1Q8TCU4 4167 aa3.77□□□□□ -1.81
PKP4-202ENST00000389759 LORP23490 312 aaPredicted RBP3.77□□□□□ -1.81
PKP4-202ENST00000389759 VPS13BQ7Z7G8 4022 aa3.76□□□□□ -1.81
PKP4-202ENST00000389759 LRP1Q07954 4544 aaKnown RBP3.75□□□□□ -1.81
PKP4-202ENST00000389759 DNAH3Q8TD57 4116 aa3.74□□□□□ -1.81
PKP4-202ENST00000389759 KIAA1109Q2LD37 5005 aa3.74□□□□□ -1.81
PKP4-202ENST00000389759 HECTD4Q9Y4D8 3996 aa3.73□□□□□ -1.81
PKP4-202ENST00000389759 KRTAP10-12P60413 245 aa3.73□□□□□ -1.81
PKP4-202ENST00000389759 DYNC1H1Q14204 4646 aaKnown RBP3.71□□□□□ -1.82
PKP4-202ENST00000389759 KRTAP12-3P60328 96 aa3.7□□□□□ -1.82
PKP4-202ENST00000389759 RYR1P21817 5038 aa3.69□□□□□ -1.82
PKP4-202ENST00000389759 KMT2CQ8NEZ4 4911 aaKnown RBP3.69□□□□□ -1.82
PKP4-202ENST00000389759 LCE3AQ5TA76 89 aa3.68□□□□□ -1.82
PKP4-202ENST00000389759 FAT2Q9NYQ8 4349 aa3.64□□□□□ -1.83
PKP4-202ENST00000389759 APOBP04114 4563 aaKnown RBP3.64□□□□□ -1.83
PKP4-202ENST00000389759 DYNC2H1Q8NCM8 4307 aaKnown RBP3.64□□□□□ -1.83
PKP4-202ENST00000389759 SACSQ9NZJ4 4579 aa3.63□□□□□ -1.83
PKP4-202ENST00000389759 RYR3Q15413 4870 aa3.62□□□□□ -1.83
PKP4-202ENST00000389759 RYR2Q92736 4967 aa3.61□□□□□ -1.83
PKP4-202ENST00000389759 LRP2P98164 4655 aa3.57□□□□□ -1.84
PKP4-202ENST00000389759 BIRC6Q9NR09 4857 aa3.57□□□□□ -1.84
PKP4-202ENST00000389759 EPPK1P58107 5090 aaKnown RBP3.53□□□□□ -1.84
PKP4-202ENST00000389759 KRTAP17-1Q9BYP8 105 aa3.53□□□□□ -1.84
PKP4-202ENST00000389759 KRTAP4-1Q9BYQ7 146 aa3.51□□□□□ -1.85
PKP4-202ENST00000389759 CRCT1Q9UGL9 99 aa3.49□□□□□ -1.85
PKP4-202ENST00000389759 LCE2CQ5TA81 110 aa3.49□□□□□ -1.85
PKP4-202ENST00000389759 HERC2O95714 4834 aa3.48□□□□□ -1.85
PKP4-202ENST00000389759 MUC2Q02817 5179 aa3.47□□□□□ -1.85
PKP4-202ENST00000389759 LPAP08519 4548 aa3.46□□□□□ -1.86
PKP4-202ENST00000389759 PKD1P98161 4303 aa3.46□□□□□ -1.86
PKP4-202ENST00000389759 LCE2BO14633 110 aa3.45□□□□□ -1.86
PKP4-202ENST00000389759 HSPG2P98160 4391 aa3.45□□□□□ -1.86
PKP4-202ENST00000389759 SPRR2GQ9BYE4 73 aa3.43□□□□□ -1.86
PKP4-202ENST00000389759 LCE2AQ5TA79 106 aaPredicted RBP3.43□□□□□ -1.86
PKP4-202ENST00000389759 ABCA13Q86UQ4 5058 aa3.38□□□□□ -1.87
PKP4-202ENST00000389759 KRTAP8-1Q8IUC2 63 aa3.38□□□□□ -1.87
PKP4-202ENST00000389759 RNF213Q63HN8 5207 aa3.37□□□□□ -1.87
PKP4-202ENST00000389759 KRTAP10-5P60370 271 aa3.37□□□□□ -1.87
PKP4-202ENST00000389759 PCLOQ9Y6V0 5065 aa3.35□□□□□ -1.87
PKP4-202ENST00000389759 MT2AP02795 61 aa3.35□□□□□ -1.87
PKP4-202ENST00000389759 MT1HP80294 61 aa3.33□□□□□ -1.88
PKP4-202ENST00000389759 HERC1Q15751 4861 aa3.3□□□□□ -1.88
PKP4-202ENST00000389759 FAT4Q6V0I7 4981 aa3.3□□□□□ -1.88
PKP4-202ENST00000389759 PKHD1L1Q86WI1 4243 aa3.3□□□□□ -1.88
PKP4-202ENST00000389759 MT1FP04733 61 aa3.29□□□□□ -1.88
PKP4-202ENST00000389759 FSIP2Q5CZC0 6907 aa3.27□□□□□ -1.89
PKP4-202ENST00000389759 SPRR5A0A1B0GTR4 108 aa3.27□□□□□ -1.89
PKP4-202ENST00000389759 LCE3CQ5T5A8 94 aa3.26□□□□□ -1.89
PKP4-202ENST00000389759 KRTAP19-5Q3LI72 72 aa3.26□□□□□ -1.89
PKP4-202ENST00000389759 KRTAP19-1Q8IUB9 90 aa3.24□□□□□ -1.89
PKP4-202ENST00000389759 UBR4Q5T4S7 5183 aa3.21□□□□□ -1.9
PKP4-202ENST00000389759 TNXBP22105 4242 aa3.2□□□□□ -1.9
PKP4-202ENST00000389759 KRTAP19-8Q3LI54 63 aa3.18□□□□□ -1.9
PKP4-202ENST00000389759 KRTAP19-4Q3LI73 84 aa3.16□□□□□ -1.9
PKP4-202ENST00000389759 KRTAP10-7P60409 375 aaPredicted RBP3.16□□□□□ -1.9
PKP4-202ENST00000389759 MT1XP80297 61 aa3.12□□□□□ -1.91
PKP4-202ENST00000389759 HMCN2Q8NDA2 5059 aa3.1□□□□□ -1.91
PKP4-202ENST00000389759 OBSCNQ5VST9 7968 aa3.08□□□□□ -1.92
PKP4-202ENST00000389759 MT1BP07438 61 aa3.07□□□□□ -1.92
PKP4-202ENST00000389759 KRTAP12-4P60329 112 aa3.02□□□□□ -1.93
PKP4-202ENST00000389759 KRTAP9-8Q9BYQ0 159 aa3.02□□□□□ -1.93
PKP4-202ENST00000389759 USH2AO75445 5202 aa3.02□□□□□ -1.93
PKP4-202ENST00000389759 SPRR2FQ96RM1 72 aa3.01□□□□□ -1.93
PKP4-202ENST00000389759 KRTAP4-8A0A0G2JLE6 195 aa2.96□□□□□ -1.93
PKP4-202ENST00000389759 KRTAP4-8Q9BYQ9 185 aa2.96□□□□□ -1.93
PKP4-202ENST00000389759 KRTAP19-2Q3LHN2 52 aa2.95□□□□□ -1.94
PKP4-202ENST00000389759 MUC17Q685J3 4493 aa2.95□□□□□ -1.94
PKP4-202ENST00000389759 LCE3BQ5TA77 95 aa2.94□□□□□ -1.94
PKP4-202ENST00000389759 SYNE1Q8NF91 8797 aaKnown RBP2.93□□□□□ -1.94
PKP4-202ENST00000389759 MT1GP13640 62 aa2.93□□□□□ -1.94
PKP4-202ENST00000389759 KRTAP9-3Q9BYQ3 159 aa2.93□□□□□ -1.94
PKP4-202ENST00000389759 KMT2DO14686 5537 aa2.92□□□□□ -1.94
PKP4-202ENST00000389759 DSTQ03001 7570 aaKnown RBP2.9□□□□□ -1.94
PKP4-202ENST00000389759 FLGP20930 4061 aaPredicted RBP2.9□□□□□ -1.95
PKP4-202ENST00000389759 KRTAP9-2Q9BYQ4 174 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms