RNA–Protein interactions for RNA: ENST00000389609.8

CCDC149-202, Transcript of coiled-coil domain containing 149, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CCDC149, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-202ENST00000389609 J3QL48 77 aa5.92□□□□□ -1.46
CCDC149-202ENST00000389609 SPINT4Q6UDR6 99 aa5.92□□□□□ -1.46
CCDC149-202ENST00000389609 RPL37P61927 97 aaKnown RBP5.91□□□□□ -1.46
CCDC149-202ENST00000389609 TPRXLQ17RH7 258 aa5.9□□□□□ -1.46
CCDC149-202ENST00000389609 LRP1Q07954 4544 aaKnown RBP5.9□□□□□ -1.46
CCDC149-202ENST00000389609 KRTAP10-8P60410 259 aa5.9□□□□□ -1.47
CCDC149-202ENST00000389609 KRTAP15-1Q3LI76 137 aa5.89□□□□□ -1.47
CCDC149-202ENST00000389609 FAT3Q8TDW7 4589 aa5.88□□□□□ -1.47
CCDC149-202ENST00000389609 TNXBP22105 4242 aa5.88□□□□□ -1.47
CCDC149-202ENST00000389609 NDUFAF8A1L188 74 aa5.87□□□□□ -1.47
CCDC149-202ENST00000389609 KRTAP10-6P60371 365 aaPredicted RBP5.84□□□□□ -1.47
CCDC149-202ENST00000389609 KRTAP3-3Q9BYR6 98 aa5.84□□□□□ -1.47
CCDC149-202ENST00000389609 HSPG2P98160 4391 aa5.84□□□□□ -1.48
CCDC149-202ENST00000389609 KRTAP17-1Q9BYP8 105 aa5.83□□□□□ -1.48
CCDC149-202ENST00000389609 LCE2DQ5TA82 110 aaPredicted RBP5.82□□□□□ -1.48
CCDC149-202ENST00000389609 S4R3F8 94 aa5.81□□□□□ -1.48
CCDC149-202ENST00000389609 XP32Q5T750 250 aa5.8□□□□□ -1.48
CCDC149-202ENST00000389609 RYR3Q15413 4870 aa5.79□□□□□ -1.48
CCDC149-202ENST00000389609 KRTAP3-2Q9BYR7 98 aa5.79□□□□□ -1.48
CCDC149-202ENST00000389609 C10orf95Q9H7T3 257 aa5.78□□□□□ -1.48
CCDC149-202ENST00000389609 KRTAP13-4Q3LI77 160 aa5.77□□□□□ -1.49
CCDC149-202ENST00000389609 Q5VSD8 79 aa5.77□□□□□ -1.49
CCDC149-202ENST00000389609 DMBT1Q9UGM3 2413 aaPredicted RBP5.76□□□□□ -1.49
CCDC149-202ENST00000389609 RYR1P21817 5038 aa5.76□□□□□ -1.49
CCDC149-202ENST00000389609 MYCBP2O75592 4640 aa5.73□□□□□ -1.49
CCDC149-202ENST00000389609 A0A0D9SG42 100 aa5.72□□□□□ -1.49
CCDC149-202ENST00000389609 KIAA1109Q2LD37 5005 aa5.68□□□□□ -1.5
CCDC149-202ENST00000389609 A0A0A0MQY5 61 aa5.67□□□□□ -1.5
CCDC149-202ENST00000389609 MT1HL1P0DM35 61 aa5.67□□□□□ -1.5
CCDC149-202ENST00000389609 M0QZ58 72 aa5.66□□□□□ -1.5
CCDC149-202ENST00000389609 KRTAP12-2P59991 146 aa5.62□□□□□ -1.51
CCDC149-202ENST00000389609 LPAP08519 4548 aa5.61□□□□□ -1.51
CCDC149-202ENST00000389609 KRTAP12-1P59990 96 aa5.58□□□□□ -1.52
CCDC149-202ENST00000389609 EPPK1P58107 5090 aaKnown RBP5.57□□□□□ -1.52
CCDC149-202ENST00000389609 LRP2P98164 4655 aa5.55□□□□□ -1.52
CCDC149-202ENST00000389609 ABCA13Q86UQ4 5058 aa5.49□□□□□ -1.53
CCDC149-202ENST00000389609 KRTAP4-5Q9BYR2 181 aa5.48□□□□□ -1.53
CCDC149-202ENST00000389609 LUZP6Q538Z0 58 aa5.47□□□□□ -1.53
CCDC149-202ENST00000389609 SEC61BP60468 96 aaKnown RBP5.42□□□□□ -1.54
CCDC149-202ENST00000389609 PLAC4Q8WY50 150 aa5.38□□□□□ -1.55
CCDC149-202ENST00000389609 BIRC6Q9NR09 4857 aa5.38□□□□□ -1.55
CCDC149-202ENST00000389609 R4GN34 69 aa5.38□□□□□ -1.55
CCDC149-202ENST00000389609 MUC17Q685J3 4493 aa5.32□□□□□ -1.56
CCDC149-202ENST00000389609 KRTAP4-1Q9BYQ7 146 aa5.3□□□□□ -1.56
CCDC149-202ENST00000389609 HERC2O95714 4834 aa5.29□□□□□ -1.56
CCDC149-202ENST00000389609 PP632Q6XCG6 107 aa5.26□□□□□ -1.57
CCDC149-202ENST00000389609 LORP23490 312 aaPredicted RBP5.23□□□□□ -1.57
CCDC149-202ENST00000389609 KRTAP19-2Q3LHN2 52 aa5.22□□□□□ -1.57
CCDC149-202ENST00000389609 KRTAP23-1A1A580 65 aa5.15□□□□□ -1.59
CCDC149-202ENST00000389609 MUC2Q02817 5179 aa5.12□□□□□ -1.59
CCDC149-202ENST00000389609 PCLOQ9Y6V0 5065 aa5.11□□□□□ -1.59
CCDC149-202ENST00000389609 CAMK2N1Q7Z7J9 78 aa5.09□□□□□ -1.59
CCDC149-202ENST00000389609 FLGP20930 4061 aaPredicted RBP5□□□□□ -1.61
CCDC149-202ENST00000389609 HERC1Q15751 4861 aa5□□□□□ -1.61
CCDC149-202ENST00000389609 SPRR5A0A1B0GTR4 108 aa5□□□□□ -1.61
CCDC149-202ENST00000389609 TNP1P09430 55 aa5□□□□□ -1.61
CCDC149-202ENST00000389609 HMCN2Q8NDA2 5059 aa4.97□□□□□ -1.61
CCDC149-202ENST00000389609 LCE2BO14633 110 aa4.91□□□□□ -1.62
CCDC149-202ENST00000389609 LCE2CQ5TA81 110 aa4.91□□□□□ -1.62
CCDC149-202ENST00000389609 SPRR2GQ9BYE4 73 aa4.9□□□□□ -1.62
CCDC149-202ENST00000389609 FAT4Q6V0I7 4981 aa4.88□□□□□ -1.63
CCDC149-202ENST00000389609 PRO2289Q9P1D8 64 aa4.85□□□□□ -1.63
CCDC149-202ENST00000389609 LCE2AQ5TA79 106 aaPredicted RBP4.82□□□□□ -1.64
CCDC149-202ENST00000389609 KRTAP19-1Q8IUB9 90 aa4.78□□□□□ -1.64
CCDC149-202ENST00000389609 MT1HP80294 61 aa4.74□□□□□ -1.65
CCDC149-202ENST00000389609 UBR4Q5T4S7 5183 aa4.74□□□□□ -1.65
CCDC149-202ENST00000389609 RNF213Q63HN8 5207 aa4.73□□□□□ -1.65
CCDC149-202ENST00000389609 INE1O15225 51 aa4.72□□□□□ -1.65
CCDC149-202ENST00000389609 M0R2T5 61 aa4.71□□□□□ -1.66
CCDC149-202ENST00000389609 KRTAP19-8Q3LI54 63 aa4.69□□□□□ -1.66
CCDC149-202ENST00000389609 MT1FP04733 61 aa4.67□□□□□ -1.66
CCDC149-202ENST00000389609 MT2AP02795 61 aa4.66□□□□□ -1.66
CCDC149-202ENST00000389609 KRTAP9-8Q9BYQ0 159 aa4.65□□□□□ -1.67
CCDC149-202ENST00000389609 KRTAP8-1Q8IUC2 63 aa4.64□□□□□ -1.67
CCDC149-202ENST00000389609 LCE3AQ5TA76 89 aa4.62□□□□□ -1.67
CCDC149-202ENST00000389609 KRTAP10-10P60014 251 aa4.61□□□□□ -1.67
CCDC149-202ENST00000389609 MT1BP07438 61 aa4.52□□□□□ -1.69
CCDC149-202ENST00000389609 KRTAP10-5P60370 271 aa4.51□□□□□ -1.69
CCDC149-202ENST00000389609 MT1XP80297 61 aa4.5□□□□□ -1.69
CCDC149-202ENST00000389609 KRTAP10-12P60413 245 aa4.48□□□□□ -1.69
CCDC149-202ENST00000389609 KRTAP12-3P60328 96 aa4.45□□□□□ -1.7
CCDC149-202ENST00000389609 KRTAP9-3Q9BYQ3 159 aa4.45□□□□□ -1.7
CCDC149-202ENST00000389609 KRTAP10-7P60409 375 aaPredicted RBP4.35□□□□□ -1.71
CCDC149-202ENST00000389609 KRTAP19-4Q3LI73 84 aa4.28□□□□□ -1.72
CCDC149-202ENST00000389609 USH2AO75445 5202 aa4.21□□□□□ -1.73
CCDC149-202ENST00000389609 LCE3CQ5T5A8 94 aa4.21□□□□□ -1.74
CCDC149-202ENST00000389609 KRTAP19-5Q3LI72 72 aa4.18□□□□□ -1.74
CCDC149-202ENST00000389609 KMT2DO14686 5537 aa4.12□□□□□ -1.75
CCDC149-202ENST00000389609 KRTAP4-8A0A0G2JLE6 195 aa4.1□□□□□ -1.75
CCDC149-202ENST00000389609 KRTAP4-8Q9BYQ9 185 aa4.1□□□□□ -1.75
CCDC149-202ENST00000389609 LOC100996750A0A140TA64 210 aa4.09□□□□□ -1.76
CCDC149-202ENST00000389609 KRTAP4-6Q9BYQ5 205 aa4.09□□□□□ -1.76
CCDC149-202ENST00000389609 KRTAP19-7Q3SYF9 63 aa4.01□□□□□ -1.77
CCDC149-202ENST00000389609 KRTAP2-3P0C7H8 128 aa4□□□□□ -1.77
CCDC149-202ENST00000389609 KRTAP2-4Q9BYR9 128 aa4□□□□□ -1.77
CCDC149-202ENST00000389609 KRTAP2-1Q9BYU5 128 aa4□□□□□ -1.77
CCDC149-202ENST00000389609 KRTAP9-6A8MVA2 160 aa3.98□□□□□ -1.77
CCDC149-202ENST00000389609 SSPOA2VEC9 5147 aa3.93□□□□□ -1.78
CCDC149-202ENST00000389609 MT1LQ93083 61 aa3.92□□□□□ -1.78
CCDC149-202ENST00000389609 MT1EP04732 61 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms