RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 LRP1Q07954 4544 aaKnown RBP7.83□□□□□ -1.16
SCFD2-201ENST00000388940 RPL37P61927 97 aaKnown RBP7.83□□□□□ -1.16
SCFD2-201ENST00000388940 RYR1P21817 5038 aa7.81□□□□□ -1.16
SCFD2-201ENST00000388940 XP32Q5T750 250 aa7.78□□□□□ -1.16
SCFD2-201ENST00000388940 KRTAP17-1Q9BYP8 105 aa7.76□□□□□ -1.17
SCFD2-201ENST00000388940 A0A1B0GU33 70 aa7.75□□□□□ -1.17
SCFD2-201ENST00000388940 H0YAA0 97 aa7.73□□□□□ -1.17
SCFD2-201ENST00000388940 MT1HL1P0DM35 61 aa7.73□□□□□ -1.17
SCFD2-201ENST00000388940 H1FX-AS1Q4G0G2 97 aa7.73□□□□□ -1.17
SCFD2-201ENST00000388940 DMBT1Q9UGM3 2413 aaPredicted RBP7.71□□□□□ -1.18
SCFD2-201ENST00000388940 KRTAP3-3Q9BYR6 98 aa7.66□□□□□ -1.18
SCFD2-201ENST00000388940 P0C880 135 aa7.64□□□□□ -1.19
SCFD2-201ENST00000388940 KIAA1109Q2LD37 5005 aa7.61□□□□□ -1.19
SCFD2-201ENST00000388940 S4R3F8 94 aa7.59□□□□□ -1.19
SCFD2-201ENST00000388940 EPPK1P58107 5090 aaKnown RBP7.59□□□□□ -1.19
SCFD2-201ENST00000388940 TPRXLQ17RH7 258 aa7.57□□□□□ -1.2
SCFD2-201ENST00000388940 KRTAP10-6P60371 365 aaPredicted RBP7.56□□□□□ -1.2
SCFD2-201ENST00000388940 MYCBP2O75592 4640 aa7.54□□□□□ -1.2
SCFD2-201ENST00000388940 KRTAP3-2Q9BYR7 98 aa7.52□□□□□ -1.21
SCFD2-201ENST00000388940 K7ERS5 55 aa7.48□□□□□ -1.21
SCFD2-201ENST00000388940 KRTAP13-4Q3LI77 160 aa7.42□□□□□ -1.22
SCFD2-201ENST00000388940 A0A0A0MQY5 61 aa7.37□□□□□ -1.23
SCFD2-201ENST00000388940 SPINT4Q6UDR6 99 aa7.37□□□□□ -1.23
SCFD2-201ENST00000388940 KRTAP4-5Q9BYR2 181 aa7.37□□□□□ -1.23
SCFD2-201ENST00000388940 LRP2P98164 4655 aa7.37□□□□□ -1.23
SCFD2-201ENST00000388940 CRIPTQ9P021 101 aa7.36□□□□□ -1.23
SCFD2-201ENST00000388940 NDUFAF8A1L188 74 aa7.32□□□□□ -1.24
SCFD2-201ENST00000388940 LPAP08519 4548 aa7.31□□□□□ -1.24
SCFD2-201ENST00000388940 KRTAP15-1Q3LI76 137 aa7.31□□□□□ -1.24
SCFD2-201ENST00000388940 A0A0D9SG42 100 aa7.31□□□□□ -1.24
SCFD2-201ENST00000388940 ABCA13Q86UQ4 5058 aa7.28□□□□□ -1.24
SCFD2-201ENST00000388940 SEC61BP60468 96 aaKnown RBP7.28□□□□□ -1.24
SCFD2-201ENST00000388940 M0QZ58 72 aa7.23□□□□□ -1.25
SCFD2-201ENST00000388940 BIRC6Q9NR09 4857 aa7.2□□□□□ -1.26
SCFD2-201ENST00000388940 HERC2O95714 4834 aa7.18□□□□□ -1.26
SCFD2-201ENST00000388940 J3QL48 77 aa7.17□□□□□ -1.26
SCFD2-201ENST00000388940 KRTAP12-2P59991 146 aa7.17□□□□□ -1.26
SCFD2-201ENST00000388940 KRTAP12-1P59990 96 aa7.16□□□□□ -1.26
SCFD2-201ENST00000388940 MUC17Q685J3 4493 aa7.14□□□□□ -1.27
SCFD2-201ENST00000388940 KRTAP4-1Q9BYQ7 146 aa7.13□□□□□ -1.27
SCFD2-201ENST00000388940 KRTAP19-2Q3LHN2 52 aa7.05□□□□□ -1.28
SCFD2-201ENST00000388940 C10orf95Q9H7T3 257 aa7.03□□□□□ -1.28
SCFD2-201ENST00000388940 R4GN34 69 aa7.02□□□□□ -1.29
SCFD2-201ENST00000388940 LUZP6Q538Z0 58 aa6.99□□□□□ -1.29
SCFD2-201ENST00000388940 LORP23490 312 aaPredicted RBP6.93□□□□□ -1.3
SCFD2-201ENST00000388940 PCLOQ9Y6V0 5065 aa6.88□□□□□ -1.31
SCFD2-201ENST00000388940 HERC1Q15751 4861 aa6.84□□□□□ -1.32
SCFD2-201ENST00000388940 FLGP20930 4061 aaPredicted RBP6.81□□□□□ -1.32
SCFD2-201ENST00000388940 LCE2DQ5TA82 110 aaPredicted RBP6.77□□□□□ -1.33
SCFD2-201ENST00000388940 HMCN2Q8NDA2 5059 aa6.74□□□□□ -1.33
SCFD2-201ENST00000388940 MUC2Q02817 5179 aa6.68□□□□□ -1.34
SCFD2-201ENST00000388940 PLAC4Q8WY50 150 aa6.66□□□□□ -1.34
SCFD2-201ENST00000388940 LCE2CQ5TA81 110 aa6.65□□□□□ -1.35
SCFD2-201ENST00000388940 CAMK2N1Q7Z7J9 78 aa6.64□□□□□ -1.35
SCFD2-201ENST00000388940 PP632Q6XCG6 107 aa6.54□□□□□ -1.36
SCFD2-201ENST00000388940 SPRR2GQ9BYE4 73 aa6.49□□□□□ -1.37
SCFD2-201ENST00000388940 MT1HP80294 61 aa6.46□□□□□ -1.38
SCFD2-201ENST00000388940 KRTAP19-1Q8IUB9 90 aa6.43□□□□□ -1.38
SCFD2-201ENST00000388940 UBR4Q5T4S7 5183 aa6.42□□□□□ -1.38
SCFD2-201ENST00000388940 KRTAP23-1A1A580 65 aa6.42□□□□□ -1.38
SCFD2-201ENST00000388940 M0R2T5 61 aa6.42□□□□□ -1.38
SCFD2-201ENST00000388940 TNP1P09430 55 aa6.42□□□□□ -1.38
SCFD2-201ENST00000388940 RNF213Q63HN8 5207 aa6.4□□□□□ -1.38
SCFD2-201ENST00000388940 FAT4Q6V0I7 4981 aa6.37□□□□□ -1.39
SCFD2-201ENST00000388940 MT2AP02795 61 aa6.34□□□□□ -1.39
SCFD2-201ENST00000388940 MT1FP04733 61 aa6.32□□□□□ -1.4
SCFD2-201ENST00000388940 KRTAP9-8Q9BYQ0 159 aa6.31□□□□□ -1.4
SCFD2-201ENST00000388940 KRTAP10-10P60014 251 aa6.3□□□□□ -1.4
SCFD2-201ENST00000388940 KRTAP19-8Q3LI54 63 aa6.24□□□□□ -1.41
SCFD2-201ENST00000388940 PRO2289Q9P1D8 64 aa6.19□□□□□ -1.42
SCFD2-201ENST00000388940 SPRR5A0A1B0GTR4 108 aa6.16□□□□□ -1.42
SCFD2-201ENST00000388940 MT1BP07438 61 aa6.11□□□□□ -1.43
SCFD2-201ENST00000388940 KRTAP9-3Q9BYQ3 159 aa6.06□□□□□ -1.44
SCFD2-201ENST00000388940 LCE3AQ5TA76 89 aa6.06□□□□□ -1.44
SCFD2-201ENST00000388940 KRTAP10-5P60370 271 aa6.05□□□□□ -1.44
SCFD2-201ENST00000388940 MT1XP80297 61 aa6.03□□□□□ -1.44
SCFD2-201ENST00000388940 INE1O15225 51 aa6.01□□□□□ -1.45
SCFD2-201ENST00000388940 KRTAP8-1Q8IUC2 63 aa5.98□□□□□ -1.45
SCFD2-201ENST00000388940 KRTAP10-12P60413 245 aa5.88□□□□□ -1.47
SCFD2-201ENST00000388940 KRTAP10-7P60409 375 aaPredicted RBP5.83□□□□□ -1.48
SCFD2-201ENST00000388940 LCE2AQ5TA79 106 aaPredicted RBP5.82□□□□□ -1.48
SCFD2-201ENST00000388940 LCE2BO14633 110 aa5.8□□□□□ -1.48
SCFD2-201ENST00000388940 KRTAP12-3P60328 96 aa5.8□□□□□ -1.48
SCFD2-201ENST00000388940 KRTAP19-5Q3LI72 72 aa5.58□□□□□ -1.52
SCFD2-201ENST00000388940 USH2AO75445 5202 aa5.51□□□□□ -1.53
SCFD2-201ENST00000388940 LCE3CQ5T5A8 94 aa5.47□□□□□ -1.53
SCFD2-201ENST00000388940 KRTAP4-8A0A0G2JLE6 195 aa5.46□□□□□ -1.54
SCFD2-201ENST00000388940 KRTAP4-8Q9BYQ9 185 aa5.46□□□□□ -1.54
SCFD2-201ENST00000388940 KRTAP19-7Q3SYF9 63 aa5.39□□□□□ -1.55
SCFD2-201ENST00000388940 KRTAP19-4Q3LI73 84 aa5.36□□□□□ -1.55
SCFD2-201ENST00000388940 KMT2DO14686 5537 aa5.36□□□□□ -1.55
SCFD2-201ENST00000388940 SSPOA2VEC9 5147 aa5.31□□□□□ -1.56
SCFD2-201ENST00000388940 KRTAP19-6Q3LI70 58 aa5.3□□□□□ -1.56
SCFD2-201ENST00000388940 MT1EP04732 61 aa5.24□□□□□ -1.57
SCFD2-201ENST00000388940 FSIP2Q5CZC0 6907 aa5.23□□□□□ -1.57
SCFD2-201ENST00000388940 MT1LQ93083 61 aa5.23□□□□□ -1.57
SCFD2-201ENST00000388940 KRTAP9-6A8MVA2 160 aa5.22□□□□□ -1.57
SCFD2-201ENST00000388940 KRTAP4-7Q9BYR0 210 aa5.16□□□□□ -1.58
SCFD2-201ENST00000388940 KRTAP2-3P0C7H8 128 aa5.06□□□□□ -1.6
SCFD2-201ENST00000388940 KRTAP2-4Q9BYR9 128 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms