RNA–Protein interactions for RNA: ENST00000384566.1

RNU6-140P-201, Transcript of RNA, U6 small nuclear 140, pseudogene, humanhuman

BASIC

Gene RNU6-140P, Length 108 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-140P-201ENST00000384566 SPTBN5Q9NRC6 3674 aaKnown RBP-0.56□□□□□ -2.5
RNU6-140P-201ENST00000384566 USH2AO75445 5202 aa-0.56□□□□□ -2.5
RNU6-140P-201ENST00000384566 CCDC168Q8NDH2 2452 aa-0.56□□□□□ -2.5
RNU6-140P-201ENST00000384566 RELNP78509 3460 aa-0.57□□□□□ -2.5
RNU6-140P-201ENST00000384566 PLNP26678 52 aa-0.57□□□□□ -2.5
RNU6-140P-201ENST00000384566 MT4P47944 62 aa-0.57□□□□□ -2.5
RNU6-140P-201ENST00000384566 DEFB1P60022 68 aa-0.57□□□□□ -2.5
RNU6-140P-201ENST00000384566 MT1HP80294 61 aa-0.57□□□□□ -2.5
RNU6-140P-201ENST00000384566 PLECQ15149 4684 aaKnown RBP-0.57□□□□□ -2.5
RNU6-140P-201ENST00000384566 WFDC10BQ8IUB3 73 aa-0.57□□□□□ -2.5
RNU6-140P-201ENST00000384566 KRTAP8-1Q8IUC2 63 aa-0.57□□□□□ -2.5
RNU6-140P-201ENST00000384566 NRXN3Q9Y4C0 1643 aa-0.58□□□□□ -2.5
RNU6-140P-201ENST00000384566 HERC2O95714 4834 aa-0.59□□□□□ -2.5
RNU6-140P-201ENST00000384566 ABCC8Q09428 1581 aa-0.6□□□□□ -2.51
RNU6-140P-201ENST00000384566 SMR3BP02814 79 aaPredicted RBP-0.6□□□□□ -2.51
RNU6-140P-201ENST00000384566 FSIP2Q5CZC0 6907 aa-0.6□□□□□ -2.51
RNU6-140P-201ENST00000384566 DNAH7Q8WXX0 4024 aa-0.61□□□□□ -2.51
RNU6-140P-201ENST00000384566 A0A0C4DFX4 3053 aa-0.61□□□□□ -2.51
RNU6-140P-201ENST00000384566 RIF1Q5UIP0 2472 aaKnown RBP-0.62□□□□□ -2.51
RNU6-140P-201ENST00000384566 RYR1P21817 5038 aa-0.64□□□□□ -2.51
RNU6-140P-201ENST00000384566 WDR87Q6ZQQ6 2873 aa-0.64□□□□□ -2.51
RNU6-140P-201ENST00000384566 CMC2Q9NRP2 79 aa-0.64□□□□□ -2.51
RNU6-140P-201ENST00000384566 TLN2Q9Y4G6 2542 aa-0.64□□□□□ -2.51
RNU6-140P-201ENST00000384566 IQGAP1P46940 1657 aa-0.65□□□□□ -2.51
RNU6-140P-201ENST00000384566 FANCD2Q9BXW9 1451 aa-0.65□□□□□ -2.51
RNU6-140P-201ENST00000384566 DDX60Q8IY21 1712 aaKnown RBP-0.66□□□□□ -2.51
RNU6-140P-201ENST00000384566 COL12A1Q99715 3063 aa-0.66□□□□□ -2.51
RNU6-140P-201ENST00000384566 DEFB131AP59861 70 aa-0.66□□□□□ -2.52
RNU6-140P-201ENST00000384566 CMYA5Q8N3K9 4069 aa-0.66□□□□□ -2.52
RNU6-140P-201ENST00000384566 CELSR3Q9NYQ7 3312 aa-0.66□□□□□ -2.52
RNU6-140P-201ENST00000384566 TFF3Q07654 80 aa-0.67□□□□□ -2.52
RNU6-140P-201ENST00000384566 ITPR3Q14573 2671 aa-0.67□□□□□ -2.52
RNU6-140P-201ENST00000384566 EPPK1P58107 5090 aaKnown RBP-0.68□□□□□ -2.52
RNU6-140P-201ENST00000384566 DNHD1Q96M86 4753 aa-0.68□□□□□ -2.52
RNU6-140P-201ENST00000384566 DYNC1H1Q14204 4646 aaKnown RBP-0.68□□□□□ -2.52
RNU6-140P-201ENST00000384566 DNAH10Q8IVF4 4471 aa-0.68□□□□□ -2.52
RNU6-140P-201ENST00000384566 COL6A5A8TX70 2615 aa-0.68□□□□□ -2.52
RNU6-140P-201ENST00000384566 SMIM2Q9BVW6 85 aa-0.69□□□□□ -2.52
RNU6-140P-201ENST00000384566 LAMA3Q16787 3333 aa-0.69□□□□□ -2.52
RNU6-140P-201ENST00000384566 GPR98Q8WXG9 6306 aa-0.7□□□□□ -2.52
RNU6-140P-201ENST00000384566 LINC01546A6NGU7 62 aa-0.7□□□□□ -2.52
RNU6-140P-201ENST00000384566 USP9YO00507 2555 aaPredicted RBP-0.71□□□□□ -2.52
RNU6-140P-201ENST00000384566 SPART-AS1P0CW21 52 aa-0.71□□□□□ -2.52
RNU6-140P-201ENST00000384566 USP9XQ93008 2570 aaPredicted RBP-0.72□□□□□ -2.53
RNU6-140P-201ENST00000384566 DNAH17Q9UFH2 4485 aa-0.72□□□□□ -2.53
RNU6-140P-201ENST00000384566 MACF1Q9UPN3 7388 aaKnown RBP-0.74□□□□□ -2.53
RNU6-140P-201ENST00000384566 SYNE2Q8WXH0 6885 aaKnown RBP-0.74□□□□□ -2.53
RNU6-140P-201ENST00000384566 TRPM2O94759 1503 aa-0.74□□□□□ -2.53
RNU6-140P-201ENST00000384566 NFAT5O94916 1531 aa-0.74□□□□□ -2.53
RNU6-140P-201ENST00000384566 CLTCL1P53675 1640 aa-0.75□□□□□ -2.53
RNU6-140P-201ENST00000384566 FRYQ5TBA9 3013 aa-0.75□□□□□ -2.53
RNU6-140P-201ENST00000384566 MT1EP04732 61 aa-0.76□□□□□ -2.53
RNU6-140P-201ENST00000384566 POLR2KP53803 58 aaKnown RBP-0.76□□□□□ -2.53
RNU6-140P-201ENST00000384566 BIRC6Q9NR09 4857 aa-0.76□□□□□ -2.53
RNU6-140P-201ENST00000384566 MT1XP80297 61 aa-0.77□□□□□ -2.53
RNU6-140P-201ENST00000384566 C5orf42Q9H799 3197 aa-0.78□□□□□ -2.53
RNU6-140P-201ENST00000384566 SNRPGP15A8MWD9 76 aa-0.79□□□□□ -2.54
RNU6-140P-201ENST00000384566 ITPR1Q14643 2758 aa-0.79□□□□□ -2.54
RNU6-140P-201ENST00000384566 SRCAPQ6ZRS2 3230 aa-0.8□□□□□ -2.54
RNU6-140P-201ENST00000384566 RNF213Q63HN8 5207 aa-0.81□□□□□ -2.54
RNU6-140P-201ENST00000384566 CSMD1Q96PZ7 3565 aa-0.81□□□□□ -2.54
RNU6-140P-201ENST00000384566 MT1LQ93083 61 aa-0.81□□□□□ -2.54
RNU6-140P-201ENST00000384566 NDUFA1O15239 70 aa-0.84□□□□□ -2.54
RNU6-140P-201ENST00000384566 CHD7Q9P2D1 2997 aa-0.84□□□□□ -2.54
RNU6-140P-201ENST00000384566 HYDINQ4G0P3 5121 aa-0.84□□□□□ -2.54
RNU6-140P-201ENST00000384566 SPTAN1Q13813 2472 aaKnown RBP-0.84□□□□□ -2.54
RNU6-140P-201ENST00000384566 MGAQ8IWI9 3026 aa-0.85□□□□□ -2.55
RNU6-140P-201ENST00000384566 TEX15Q9BXT5 2789 aa-0.85□□□□□ -2.55
RNU6-140P-201ENST00000384566 ZFHX4Q86UP3 3567 aa-0.85□□□□□ -2.55
RNU6-140P-201ENST00000384566 LAMA2P24043 3122 aaKnown RBP-0.86□□□□□ -2.55
RNU6-140P-201ENST00000384566 ADGRG4Q8IZF6 3080 aa-0.86□□□□□ -2.55
RNU6-140P-201ENST00000384566 DNAH5Q8TE73 4624 aa-0.88□□□□□ -2.55
RNU6-140P-201ENST00000384566 IQGAP2Q13576 1575 aa-0.89□□□□□ -2.55
RNU6-140P-201ENST00000384566 TRRAPQ9Y4A5 3859 aa-0.9□□□□□ -2.55
RNU6-140P-201ENST00000384566 LEAP2Q969E1 77 aa-0.9□□□□□ -2.55
RNU6-140P-201ENST00000384566 NIPBLQ6KC79 2804 aaeCLIP-0.92□□□□□ -2.56
RNU6-140P-201ENST00000384566 LRBAP50851 2863 aa-0.93□□□□□ -2.56
RNU6-140P-201ENST00000384566 MYO9AB2RTY4 2548 aa-0.95□□□□□ -2.56
RNU6-140P-201ENST00000384566 EYSQ5T1H1 3165 aa-0.96□□□□□ -2.56
RNU6-140P-201ENST00000384566 MT1HL1P0DM35 61 aa-0.96□□□□□ -2.56
RNU6-140P-201ENST00000384566 RYR2Q92736 4967 aa-0.96□□□□□ -2.56
RNU6-140P-201ENST00000384566 DOPEY1Q5JWR5 2465 aa-0.98□□□□□ -2.57
RNU6-140P-201ENST00000384566 DEFB136Q30KP8 78 aa-0.98□□□□□ -2.57
RNU6-140P-201ENST00000384566 CSMD2Q7Z408 3487 aa-0.99□□□□□ -2.57
RNU6-140P-201ENST00000384566 KIAA1109Q2LD37 5005 aa-1□□□□□ -2.57
RNU6-140P-201ENST00000384566 RYR3Q15413 4870 aa-1□□□□□ -2.57
RNU6-140P-201ENST00000384566 MT1GP13640 62 aa-1□□□□□ -2.57
RNU6-140P-201ENST00000384566 TOMM5Q8N4H5 51 aa-1□□□□□ -2.57
RNU6-140P-201ENST00000384566 SMG1Q96Q15 3661 aaKnown RBP-1.01□□□□□ -2.57
RNU6-140P-201ENST00000384566 ATP7AQ04656 1500 aa-1.02□□□□□ -2.57
RNU6-140P-201ENST00000384566 DEFB4AO15263 64 aa-1.03□□□□□ -2.57
RNU6-140P-201ENST00000384566 CFAP46Q8IYW2 2715 aa-1.04□□□□□ -2.58
RNU6-140P-201ENST00000384566 CRYBG3Q68DQ2 2970 aa-1.04□□□□□ -2.58
RNU6-140P-201ENST00000384566 MT1MQ8N339 61 aa-1.05□□□□□ -2.58
RNU6-140P-201ENST00000384566 MT2AP02795 61 aa-1.06□□□□□ -2.58
RNU6-140P-201ENST00000384566 DMXL2Q8TDJ6 3036 aa-1.06□□□□□ -2.58
RNU6-140P-201ENST00000384566 SAMD9LQ8IVG5 1584 aa-1.07□□□□□ -2.58
RNU6-140P-201ENST00000384566 NEBP20929 6669 aa-1.08□□□□□ -2.58
RNU6-140P-201ENST00000384566 VPS13CQ709C8 3753 aa-1.09□□□□□ -2.58
RNU6-140P-201ENST00000384566 TOMM7Q9P0U1 55 aa-1.09□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms