RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 RYR1P21817 5038 aa9.49□□□□□ -0.89
CSPG5-202ENST00000383738 KRTAP12-2P59991 146 aa9.48□□□□□ -0.89
CSPG5-202ENST00000383738 DYNC1H1Q14204 4646 aaKnown RBP9.47□□□□□ -0.89
CSPG5-202ENST00000383738 LRP1BQ9NZR2 4599 aa9.47□□□□□ -0.89
CSPG5-202ENST00000383738 DNAH8Q96JB1 4490 aa9.43□□□□□ -0.9
CSPG5-202ENST00000383738 PLAC4Q8WY50 150 aa9.4□□□□□ -0.9
CSPG5-202ENST00000383738 MYCBP2O75592 4640 aa9.38□□□□□ -0.91
CSPG5-202ENST00000383738 CMYA5Q8N3K9 4069 aa9.34□□□□□ -0.91
CSPG5-202ENST00000383738 DNAH7Q8WXX0 4024 aa9.33□□□□□ -0.92
CSPG5-202ENST00000383738 RYR3Q15413 4870 aa9.32□□□□□ -0.92
CSPG5-202ENST00000383738 KRTAP10-6P60371 365 aaPredicted RBP9.31□□□□□ -0.92
CSPG5-202ENST00000383738 HYDINQ4G0P3 5121 aa9.29□□□□□ -0.92
CSPG5-202ENST00000383738 DNAH2Q9P225 4427 aa9.29□□□□□ -0.92
CSPG5-202ENST00000383738 FAT3Q8TDW7 4589 aa9.27□□□□□ -0.93
CSPG5-202ENST00000383738 DNAH17Q9UFH2 4485 aa9.25□□□□□ -0.93
CSPG5-202ENST00000383738 KRTAP10-10P60014 251 aa9.24□□□□□ -0.93
CSPG5-202ENST00000383738 KRTAP12-1P59990 96 aa9.23□□□□□ -0.93
CSPG5-202ENST00000383738 VPS13BQ7Z7G8 4022 aa9.23□□□□□ -0.93
CSPG5-202ENST00000383738 DNAH6Q9C0G6 4158 aa9.19□□□□□ -0.94
CSPG5-202ENST00000383738 DNAH3Q8TD57 4116 aa9.18□□□□□ -0.94
CSPG5-202ENST00000383738 LRP1Q07954 4544 aaKnown RBP9.17□□□□□ -0.94
CSPG5-202ENST00000383738 SACSQ9NZJ4 4579 aa9.17□□□□□ -0.94
CSPG5-202ENST00000383738 ALMS1Q8TCU4 4167 aa9.17□□□□□ -0.94
CSPG5-202ENST00000383738 KMT2CQ8NEZ4 4911 aaKnown RBP9.15□□□□□ -0.94
CSPG5-202ENST00000383738 FRAS1Q86XX4 4008 aa9.15□□□□□ -0.94
CSPG5-202ENST00000383738 DYNC2H1Q8NCM8 4307 aaKnown RBP9.1□□□□□ -0.95
CSPG5-202ENST00000383738 APOBP04114 4563 aaKnown RBP9.1□□□□□ -0.95
CSPG5-202ENST00000383738 PKHD1P08F94 4074 aa9.09□□□□□ -0.95
CSPG5-202ENST00000383738 KRTAP3-2Q9BYR7 98 aa9.06□□□□□ -0.96
CSPG5-202ENST00000383738 KRTAP3-3Q9BYR6 98 aa9.06□□□□□ -0.96
CSPG5-202ENST00000383738 KRTAP15-1Q3LI76 137 aa9.05□□□□□ -0.96
CSPG5-202ENST00000383738 KRTAP17-1Q9BYP8 105 aa9.03□□□□□ -0.96
CSPG5-202ENST00000383738 TNP1P09430 55 aa8.97□□□□□ -0.97
CSPG5-202ENST00000383738 FAT2Q9NYQ8 4349 aa8.96□□□□□ -0.97
CSPG5-202ENST00000383738 RYR2Q92736 4967 aa8.91□□□□□ -0.98
CSPG5-202ENST00000383738 HECTD4Q9Y4D8 3996 aa8.85□□□□□ -0.99
CSPG5-202ENST00000383738 HERC2O95714 4834 aa8.84□□□□□ -0.99
CSPG5-202ENST00000383738 PP632Q6XCG6 107 aa8.8□□□□□ -1
CSPG5-202ENST00000383738 LRP2P98164 4655 aa8.77□□□□□ -1.01
CSPG5-202ENST00000383738 KRTAP4-1Q9BYQ7 146 aa8.69□□□□□ -1.02
CSPG5-202ENST00000383738 EPPK1P58107 5090 aaKnown RBP8.64□□□□□ -1.03
CSPG5-202ENST00000383738 LORP23490 312 aaPredicted RBP8.58□□□□□ -1.04
CSPG5-202ENST00000383738 HSPG2P98160 4391 aa8.52□□□□□ -1.05
CSPG5-202ENST00000383738 PCLOQ9Y6V0 5065 aa8.5□□□□□ -1.05
CSPG5-202ENST00000383738 PKD1P98161 4303 aa8.46□□□□□ -1.05
CSPG5-202ENST00000383738 PRO2289Q9P1D8 64 aa8.39□□□□□ -1.07
CSPG5-202ENST00000383738 LPAP08519 4548 aa8.39□□□□□ -1.07
CSPG5-202ENST00000383738 BIRC6Q9NR09 4857 aa8.38□□□□□ -1.07
CSPG5-202ENST00000383738 ABCA13Q86UQ4 5058 aa8.36□□□□□ -1.07
CSPG5-202ENST00000383738 HERC1Q15751 4861 aa8.19□□□□□ -1.1
CSPG5-202ENST00000383738 RNF213Q63HN8 5207 aa8.15□□□□□ -1.1
CSPG5-202ENST00000383738 MT1HP80294 61 aa8.12□□□□□ -1.11
CSPG5-202ENST00000383738 FSIP2Q5CZC0 6907 aa8.09□□□□□ -1.11
CSPG5-202ENST00000383738 MUC2Q02817 5179 aa8.08□□□□□ -1.12
CSPG5-202ENST00000383738 UBR4Q5T4S7 5183 aa7.96□□□□□ -1.13
CSPG5-202ENST00000383738 MT2AP02795 61 aa7.96□□□□□ -1.14
CSPG5-202ENST00000383738 PKHD1L1Q86WI1 4243 aa7.93□□□□□ -1.14
CSPG5-202ENST00000383738 MT1FP04733 61 aa7.92□□□□□ -1.14
CSPG5-202ENST00000383738 LCE3AQ5TA76 89 aa7.9□□□□□ -1.15
CSPG5-202ENST00000383738 FAT4Q6V0I7 4981 aa7.85□□□□□ -1.15
CSPG5-202ENST00000383738 TNXBP22105 4242 aa7.83□□□□□ -1.16
CSPG5-202ENST00000383738 KRTAP10-12P60413 245 aa7.82□□□□□ -1.16
CSPG5-202ENST00000383738 CRCT1Q9UGL9 99 aa7.66□□□□□ -1.18
CSPG5-202ENST00000383738 KRTAP12-3P60328 96 aa7.65□□□□□ -1.18
CSPG5-202ENST00000383738 LCE2CQ5TA81 110 aa7.64□□□□□ -1.19
CSPG5-202ENST00000383738 INE1O15225 51 aa7.63□□□□□ -1.19
CSPG5-202ENST00000383738 SPRR2GQ9BYE4 73 aa7.61□□□□□ -1.19
CSPG5-202ENST00000383738 KRTAP19-1Q8IUB9 90 aa7.58□□□□□ -1.2
CSPG5-202ENST00000383738 HMCN2Q8NDA2 5059 aa7.49□□□□□ -1.21
CSPG5-202ENST00000383738 KRTAP9-8Q9BYQ0 159 aa7.48□□□□□ -1.21
CSPG5-202ENST00000383738 KRTAP23-1A1A580 65 aa7.47□□□□□ -1.21
CSPG5-202ENST00000383738 KRTAP19-2Q3LHN2 52 aa7.46□□□□□ -1.21
CSPG5-202ENST00000383738 MUC17Q685J3 4493 aa7.45□□□□□ -1.22
CSPG5-202ENST00000383738 KRTAP8-1Q8IUC2 63 aa7.38□□□□□ -1.23
CSPG5-202ENST00000383738 FLGP20930 4061 aaPredicted RBP7.31□□□□□ -1.24
CSPG5-202ENST00000383738 KRTAP10-7P60409 375 aaPredicted RBP7.27□□□□□ -1.25
CSPG5-202ENST00000383738 MT1BP07438 61 aa7.25□□□□□ -1.25
CSPG5-202ENST00000383738 KRTAP9-3Q9BYQ3 159 aa7.2□□□□□ -1.26
CSPG5-202ENST00000383738 KRTAP19-8Q3LI54 63 aa7.18□□□□□ -1.26
CSPG5-202ENST00000383738 MT1XP80297 61 aa7.16□□□□□ -1.26
CSPG5-202ENST00000383738 KRTAP4-8A0A0G2JLE6 195 aa7.16□□□□□ -1.26
CSPG5-202ENST00000383738 KRTAP4-8Q9BYQ9 185 aa7.16□□□□□ -1.26
CSPG5-202ENST00000383738 KRTAP19-5Q3LI72 72 aa7.15□□□□□ -1.26
CSPG5-202ENST00000383738 SPRR5A0A1B0GTR4 108 aa7.14□□□□□ -1.27
CSPG5-202ENST00000383738 LCE2BO14633 110 aa7.13□□□□□ -1.27
CSPG5-202ENST00000383738 SPRR2FQ96RM1 72 aa7.12□□□□□ -1.27
CSPG5-202ENST00000383738 OBSCNQ5VST9 7968 aa7.11□□□□□ -1.27
CSPG5-202ENST00000383738 KRTAP10-5P60370 271 aa7.1□□□□□ -1.27
CSPG5-202ENST00000383738 USH2AO75445 5202 aa7.09□□□□□ -1.27
CSPG5-202ENST00000383738 SYNE1Q8NF91 8797 aaKnown RBP6.99□□□□□ -1.29
CSPG5-202ENST00000383738 LCE3CQ5T5A8 94 aa6.86□□□□□ -1.31
CSPG5-202ENST00000383738 LCE2AQ5TA79 106 aaPredicted RBP6.86□□□□□ -1.31
CSPG5-202ENST00000383738 DSTQ03001 7570 aaKnown RBP6.8□□□□□ -1.32
CSPG5-202ENST00000383738 KMT2DO14686 5537 aa6.69□□□□□ -1.34
CSPG5-202ENST00000383738 KRTAP4-7Q9BYR0 210 aa6.68□□□□□ -1.34
CSPG5-202ENST00000383738 KRTAP9-2Q9BYQ4 174 aa6.63□□□□□ -1.35
CSPG5-202ENST00000383738 FCGBPQ9Y6R7 5405 aaPredicted RBP6.62□□□□□ -1.35
CSPG5-202ENST00000383738 SPRR2EP22531 72 aa6.56□□□□□ -1.36
CSPG5-202ENST00000383738 SPRR2BP35325 72 aa6.56□□□□□ -1.36
CSPG5-202ENST00000383738 SPRR2AP35326 72 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms