RNA–Protein interactions for RNA: ENST00000382020.8

TUSC3-201, Transcript of tumor suppressor candidate 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUSC3, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-201ENST00000382020 RPS29P62273 56 aaKnown RBP7.63□□□□□ -1.19
TUSC3-201ENST00000382020 A0A0A0MQY5 61 aa7.6□□□□□ -1.19
TUSC3-201ENST00000382020 XP32Q5T750 250 aa7.58□□□□□ -1.2
TUSC3-201ENST00000382020 LUZP6Q538Z0 58 aa7.56□□□□□ -1.2
TUSC3-201ENST00000382020 KRTAP12-2P59991 146 aa7.55□□□□□ -1.2
TUSC3-201ENST00000382020 CAMK2N1Q7Z7J9 78 aa7.54□□□□□ -1.2
TUSC3-201ENST00000382020 HYDINQ4G0P3 5121 aa7.53□□□□□ -1.2
TUSC3-201ENST00000382020 J3QL48 77 aa7.53□□□□□ -1.2
TUSC3-201ENST00000382020 KRTAP10-6P60371 365 aaPredicted RBP7.5□□□□□ -1.21
TUSC3-201ENST00000382020 PKHD1P08F94 4074 aa7.5□□□□□ -1.21
TUSC3-201ENST00000382020 DYNC2H1Q8NCM8 4307 aaKnown RBP7.49□□□□□ -1.21
TUSC3-201ENST00000382020 DYNC1H1Q14204 4646 aaKnown RBP7.47□□□□□ -1.21
TUSC3-201ENST00000382020 FAT3Q8TDW7 4589 aa7.47□□□□□ -1.21
TUSC3-201ENST00000382020 LRP1Q07954 4544 aaKnown RBP7.45□□□□□ -1.22
TUSC3-201ENST00000382020 KRTAP15-1Q3LI76 137 aa7.43□□□□□ -1.22
TUSC3-201ENST00000382020 KRTAP3-3Q9BYR6 98 aa7.37□□□□□ -1.23
TUSC3-201ENST00000382020 A0A1B0GVY2 172 aa7.37□□□□□ -1.23
TUSC3-201ENST00000382020 KRTAP12-1P59990 96 aa7.36□□□□□ -1.23
TUSC3-201ENST00000382020 FAT2Q9NYQ8 4349 aa7.35□□□□□ -1.23
TUSC3-201ENST00000382020 PLAC4Q8WY50 150 aa7.34□□□□□ -1.23
TUSC3-201ENST00000382020 KRTAP3-2Q9BYR7 98 aa7.34□□□□□ -1.23
TUSC3-201ENST00000382020 SACSQ9NZJ4 4579 aa7.31□□□□□ -1.24
TUSC3-201ENST00000382020 APOBP04114 4563 aaKnown RBP7.3□□□□□ -1.24
TUSC3-201ENST00000382020 KRTAP10-4P60372 401 aaPredicted RBP7.28□□□□□ -1.24
TUSC3-201ENST00000382020 KIAA1109Q2LD37 5005 aa7.21□□□□□ -1.26
TUSC3-201ENST00000382020 SEC61BP60468 96 aaKnown RBP7.2□□□□□ -1.26
TUSC3-201ENST00000382020 RYR1P21817 5038 aa7.18□□□□□ -1.26
TUSC3-201ENST00000382020 M0R2T5 61 aa7.16□□□□□ -1.26
TUSC3-201ENST00000382020 LRP2P98164 4655 aa7.11□□□□□ -1.27
TUSC3-201ENST00000382020 PKD1P98161 4303 aa7.08□□□□□ -1.28
TUSC3-201ENST00000382020 HSPG2P98160 4391 aa7.06□□□□□ -1.28
TUSC3-201ENST00000382020 KMT2CQ8NEZ4 4911 aaKnown RBP7.05□□□□□ -1.28
TUSC3-201ENST00000382020 MT1HL1P0DM35 61 aa7.04□□□□□ -1.28
TUSC3-201ENST00000382020 LORP23490 312 aaPredicted RBP7.03□□□□□ -1.28
TUSC3-201ENST00000382020 KRTAP4-5Q9BYR2 181 aa7□□□□□ -1.29
TUSC3-201ENST00000382020 RYR3Q15413 4870 aa6.99□□□□□ -1.29
TUSC3-201ENST00000382020 KRTAP17-1Q9BYP8 105 aa6.94□□□□□ -1.3
TUSC3-201ENST00000382020 LPAP08519 4548 aa6.9□□□□□ -1.3
TUSC3-201ENST00000382020 RYR2Q92736 4967 aa6.86□□□□□ -1.31
TUSC3-201ENST00000382020 TNP1P09430 55 aa6.85□□□□□ -1.31
TUSC3-201ENST00000382020 PP632Q6XCG6 107 aa6.8□□□□□ -1.32
TUSC3-201ENST00000382020 PKHD1L1Q86WI1 4243 aa6.77□□□□□ -1.33
TUSC3-201ENST00000382020 KRTAP4-1Q9BYQ7 146 aa6.72□□□□□ -1.33
TUSC3-201ENST00000382020 EPPK1P58107 5090 aaKnown RBP6.72□□□□□ -1.33
TUSC3-201ENST00000382020 MUC2Q02817 5179 aa6.67□□□□□ -1.34
TUSC3-201ENST00000382020 ABCA13Q86UQ4 5058 aa6.6□□□□□ -1.35
TUSC3-201ENST00000382020 KRTAP10-10P60014 251 aa6.6□□□□□ -1.35
TUSC3-201ENST00000382020 TNXBP22105 4242 aa6.58□□□□□ -1.36
TUSC3-201ENST00000382020 HERC2O95714 4834 aa6.47□□□□□ -1.37
TUSC3-201ENST00000382020 FAT4Q6V0I7 4981 aa6.38□□□□□ -1.39
TUSC3-201ENST00000382020 RNF213Q63HN8 5207 aa6.31□□□□□ -1.4
TUSC3-201ENST00000382020 LCE3AQ5TA76 89 aa6.28□□□□□ -1.4
TUSC3-201ENST00000382020 PRO2289Q9P1D8 64 aa6.24□□□□□ -1.41
TUSC3-201ENST00000382020 HERC1Q15751 4861 aa6.22□□□□□ -1.41
TUSC3-201ENST00000382020 PCLOQ9Y6V0 5065 aa6.11□□□□□ -1.43
TUSC3-201ENST00000382020 BIRC6Q9NR09 4857 aa6.09□□□□□ -1.43
TUSC3-201ENST00000382020 INE1O15225 51 aa6.04□□□□□ -1.44
TUSC3-201ENST00000382020 MUC17Q685J3 4493 aa6.04□□□□□ -1.44
TUSC3-201ENST00000382020 UBR4Q5T4S7 5183 aa6.02□□□□□ -1.45
TUSC3-201ENST00000382020 HMCN2Q8NDA2 5059 aa6.01□□□□□ -1.45
TUSC3-201ENST00000382020 KRTAP10-12P60413 245 aa6.01□□□□□ -1.45
TUSC3-201ENST00000382020 KRTAP12-3P60328 96 aa6□□□□□ -1.45
TUSC3-201ENST00000382020 MT1FP04733 61 aa5.98□□□□□ -1.45
TUSC3-201ENST00000382020 SPRR5A0A1B0GTR4 108 aa5.97□□□□□ -1.45
TUSC3-201ENST00000382020 KRTAP19-2Q3LHN2 52 aa5.97□□□□□ -1.45
TUSC3-201ENST00000382020 KRTAP19-1Q8IUB9 90 aa5.97□□□□□ -1.45
TUSC3-201ENST00000382020 KRTAP23-1A1A580 65 aa5.96□□□□□ -1.46
TUSC3-201ENST00000382020 FLGP20930 4061 aaPredicted RBP5.94□□□□□ -1.46
TUSC3-201ENST00000382020 MT2AP02795 61 aa5.94□□□□□ -1.46
TUSC3-201ENST00000382020 MT1HP80294 61 aa5.94□□□□□ -1.46
TUSC3-201ENST00000382020 FSIP2Q5CZC0 6907 aa5.9□□□□□ -1.46
TUSC3-201ENST00000382020 SPRR2GQ9BYE4 73 aa5.88□□□□□ -1.47
TUSC3-201ENST00000382020 LCE2CQ5TA81 110 aa5.81□□□□□ -1.48
TUSC3-201ENST00000382020 KRTAP10-7P60409 375 aaPredicted RBP5.77□□□□□ -1.49
TUSC3-201ENST00000382020 USH2AO75445 5202 aa5.75□□□□□ -1.49
TUSC3-201ENST00000382020 CRCT1Q9UGL9 99 aa5.73□□□□□ -1.49
TUSC3-201ENST00000382020 OBSCNQ5VST9 7968 aa5.73□□□□□ -1.49
TUSC3-201ENST00000382020 KMT2DO14686 5537 aa5.72□□□□□ -1.49
TUSC3-201ENST00000382020 KRTAP8-1Q8IUC2 63 aa5.68□□□□□ -1.5
TUSC3-201ENST00000382020 MT1XP80297 61 aa5.66□□□□□ -1.5
TUSC3-201ENST00000382020 KRTAP10-5P60370 271 aa5.64□□□□□ -1.51
TUSC3-201ENST00000382020 KRTAP9-8Q9BYQ0 159 aa5.64□□□□□ -1.51
TUSC3-201ENST00000382020 MT1BP07438 61 aa5.63□□□□□ -1.51
TUSC3-201ENST00000382020 KRTAP19-5Q3LI72 72 aa5.63□□□□□ -1.51
TUSC3-201ENST00000382020 KRTAP4-8A0A0G2JLE6 195 aa5.59□□□□□ -1.51
TUSC3-201ENST00000382020 KRTAP4-8Q9BYQ9 185 aa5.59□□□□□ -1.51
TUSC3-201ENST00000382020 SYNE1Q8NF91 8797 aaKnown RBP5.54□□□□□ -1.52
TUSC3-201ENST00000382020 DSTQ03001 7570 aaKnown RBP5.49□□□□□ -1.53
TUSC3-201ENST00000382020 KRTAP4-7Q9BYR0 210 aa5.49□□□□□ -1.53
TUSC3-201ENST00000382020 KRTAP19-8Q3LI54 63 aa5.48□□□□□ -1.53
TUSC3-201ENST00000382020 LCE3CQ5T5A8 94 aa5.43□□□□□ -1.54
TUSC3-201ENST00000382020 FCGBPQ9Y6R7 5405 aaPredicted RBP5.37□□□□□ -1.55
TUSC3-201ENST00000382020 KRTAP9-3Q9BYQ3 159 aa5.37□□□□□ -1.55
TUSC3-201ENST00000382020 LCE2BO14633 110 aa5.31□□□□□ -1.56
TUSC3-201ENST00000382020 KRTAP9-6A8MVA2 160 aa5.14□□□□□ -1.59
TUSC3-201ENST00000382020 MT1GP13640 62 aa5.1□□□□□ -1.59
TUSC3-201ENST00000382020 LOC100996750A0A140TA64 210 aa5.09□□□□□ -1.6
TUSC3-201ENST00000382020 KRTAP4-3Q9BYR4 195 aa5.09□□□□□ -1.6
TUSC3-201ENST00000382020 LCE2AQ5TA79 106 aaPredicted RBP5.08□□□□□ -1.6
TUSC3-201ENST00000382020 MUC12Q9UKN1 5478 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms