RNA–Protein interactions for RNA: ENST00000381578.6

SHOX-203, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHOX, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-203ENST00000381578 DNAH5Q8TE73 4624 aa6.29□□□□□ -1.4
SHOX-203ENST00000381578 LRP1BQ9NZR2 4599 aa6.26□□□□□ -1.41
SHOX-203ENST00000381578 SACSQ9NZJ4 4579 aa6.25□□□□□ -1.41
SHOX-203ENST00000381578 KRTAP12-2P59991 146 aa6.24□□□□□ -1.41
SHOX-203ENST00000381578 RPS29P62273 56 aaKnown RBP6.23□□□□□ -1.41
SHOX-203ENST00000381578 M0QZ58 72 aa6.23□□□□□ -1.41
SHOX-203ENST00000381578 LUZP6Q538Z0 58 aa6.22□□□□□ -1.41
SHOX-203ENST00000381578 KRTAP10-6P60371 365 aaPredicted RBP6.21□□□□□ -1.41
SHOX-203ENST00000381578 R4GN34 69 aa6.21□□□□□ -1.42
SHOX-203ENST00000381578 DYNC1H1Q14204 4646 aaKnown RBP6.21□□□□□ -1.42
SHOX-203ENST00000381578 FAT2Q9NYQ8 4349 aa6.19□□□□□ -1.42
SHOX-203ENST00000381578 PKHD1P08F94 4074 aa6.16□□□□□ -1.42
SHOX-203ENST00000381578 KRTAP10-4P60372 401 aaPredicted RBP6.15□□□□□ -1.42
SHOX-203ENST00000381578 FAT1Q14517 4588 aa6.15□□□□□ -1.42
SHOX-203ENST00000381578 KRTAP10-8P60410 259 aa6.15□□□□□ -1.42
SHOX-203ENST00000381578 PKD1P98161 4303 aa6.14□□□□□ -1.43
SHOX-203ENST00000381578 VPS13BQ7Z7G8 4022 aa6.14□□□□□ -1.43
SHOX-203ENST00000381578 CAMK2N1Q7Z7J9 78 aa6.13□□□□□ -1.43
SHOX-203ENST00000381578 LCE2BO14633 110 aa6.12□□□□□ -1.43
SHOX-203ENST00000381578 RYR2Q92736 4967 aa6.12□□□□□ -1.43
SHOX-203ENST00000381578 KMT2CQ8NEZ4 4911 aaKnown RBP6.12□□□□□ -1.43
SHOX-203ENST00000381578 KRTAP15-1Q3LI76 137 aa6.11□□□□□ -1.43
SHOX-203ENST00000381578 KRTAP12-1P59990 96 aa6.09□□□□□ -1.43
SHOX-203ENST00000381578 XP32Q5T750 250 aa6.06□□□□□ -1.44
SHOX-203ENST00000381578 PLAC4Q8WY50 150 aa6.06□□□□□ -1.44
SHOX-203ENST00000381578 M0R2T5 61 aa6.05□□□□□ -1.44
SHOX-203ENST00000381578 LCE2CQ5TA81 110 aa6.05□□□□□ -1.44
SHOX-203ENST00000381578 APOBP04114 4563 aaKnown RBP6.01□□□□□ -1.45
SHOX-203ENST00000381578 SEC61BP60468 96 aaKnown RBP6□□□□□ -1.45
SHOX-203ENST00000381578 MYCBP2O75592 4640 aa5.97□□□□□ -1.45
SHOX-203ENST00000381578 KIAA1109Q2LD37 5005 aa5.96□□□□□ -1.46
SHOX-203ENST00000381578 RYR3Q15413 4870 aa5.94□□□□□ -1.46
SHOX-203ENST00000381578 KRTAP17-1Q9BYP8 105 aa5.9□□□□□ -1.46
SHOX-203ENST00000381578 MT1HL1P0DM35 61 aa5.9□□□□□ -1.47
SHOX-203ENST00000381578 LRP1Q07954 4544 aaKnown RBP5.88□□□□□ -1.47
SHOX-203ENST00000381578 KRTAP4-5Q9BYR2 181 aa5.88□□□□□ -1.47
SHOX-203ENST00000381578 RYR1P21817 5038 aa5.88□□□□□ -1.47
SHOX-203ENST00000381578 HSPG2P98160 4391 aa5.84□□□□□ -1.47
SHOX-203ENST00000381578 LCE2AQ5TA79 106 aaPredicted RBP5.84□□□□□ -1.48
SHOX-203ENST00000381578 EPPK1P58107 5090 aaKnown RBP5.75□□□□□ -1.49
SHOX-203ENST00000381578 KRTAP23-1A1A580 65 aa5.72□□□□□ -1.49
SHOX-203ENST00000381578 PKHD1L1Q86WI1 4243 aa5.69□□□□□ -1.5
SHOX-203ENST00000381578 FAT3Q8TDW7 4589 aa5.67□□□□□ -1.5
SHOX-203ENST00000381578 LORP23490 312 aaPredicted RBP5.67□□□□□ -1.5
SHOX-203ENST00000381578 PP632Q6XCG6 107 aa5.65□□□□□ -1.5
SHOX-203ENST00000381578 TNP1P09430 55 aa5.65□□□□□ -1.51
SHOX-203ENST00000381578 TNXBP22105 4242 aa5.63□□□□□ -1.51
SHOX-203ENST00000381578 BIRC6Q9NR09 4857 aa5.59□□□□□ -1.52
SHOX-203ENST00000381578 HERC2O95714 4834 aa5.56□□□□□ -1.52
SHOX-203ENST00000381578 LRP2P98164 4655 aa5.51□□□□□ -1.53
SHOX-203ENST00000381578 ABCA13Q86UQ4 5058 aa5.5□□□□□ -1.53
SHOX-203ENST00000381578 LPAP08519 4548 aa5.46□□□□□ -1.54
SHOX-203ENST00000381578 KRTAP10-10P60014 251 aa5.42□□□□□ -1.54
SHOX-203ENST00000381578 KRTAP4-1Q9BYQ7 146 aa5.38□□□□□ -1.55
SHOX-203ENST00000381578 MUC2Q02817 5179 aa5.29□□□□□ -1.56
SHOX-203ENST00000381578 HERC1Q15751 4861 aa5.22□□□□□ -1.57
SHOX-203ENST00000381578 PCLOQ9Y6V0 5065 aa5.2□□□□□ -1.58
SHOX-203ENST00000381578 LCE3AQ5TA76 89 aa5.14□□□□□ -1.59
SHOX-203ENST00000381578 PRO2289Q9P1D8 64 aa5.13□□□□□ -1.59
SHOX-203ENST00000381578 HMCN2Q8NDA2 5059 aa5.08□□□□□ -1.6
SHOX-203ENST00000381578 KRTAP19-2Q3LHN2 52 aa5.07□□□□□ -1.6
SHOX-203ENST00000381578 MUC17Q685J3 4493 aa5.05□□□□□ -1.6
SHOX-203ENST00000381578 RNF213Q63HN8 5207 aa5□□□□□ -1.61
SHOX-203ENST00000381578 INE1O15225 51 aa4.98□□□□□ -1.61
SHOX-203ENST00000381578 FAT4Q6V0I7 4981 aa4.98□□□□□ -1.61
SHOX-203ENST00000381578 MT1HP80294 61 aa4.97□□□□□ -1.61
SHOX-203ENST00000381578 UBR4Q5T4S7 5183 aa4.95□□□□□ -1.62
SHOX-203ENST00000381578 FLGP20930 4061 aaPredicted RBP4.95□□□□□ -1.62
SHOX-203ENST00000381578 SPRR5A0A1B0GTR4 108 aa4.93□□□□□ -1.62
SHOX-203ENST00000381578 KRTAP12-3P60328 96 aa4.91□□□□□ -1.62
SHOX-203ENST00000381578 KRTAP10-12P60413 245 aa4.86□□□□□ -1.63
SHOX-203ENST00000381578 MT2AP02795 61 aa4.84□□□□□ -1.64
SHOX-203ENST00000381578 FSIP2Q5CZC0 6907 aa4.83□□□□□ -1.64
SHOX-203ENST00000381578 MT1FP04733 61 aa4.81□□□□□ -1.64
SHOX-203ENST00000381578 KRTAP19-1Q8IUB9 90 aa4.78□□□□□ -1.64
SHOX-203ENST00000381578 SPRR2GQ9BYE4 73 aa4.76□□□□□ -1.65
SHOX-203ENST00000381578 KRTAP9-8Q9BYQ0 159 aa4.75□□□□□ -1.65
SHOX-203ENST00000381578 KRTAP9-2Q9BYQ4 174 aa4.73□□□□□ -1.65
SHOX-203ENST00000381578 KRTAP8-1Q8IUC2 63 aa4.72□□□□□ -1.65
SHOX-203ENST00000381578 KRTAP19-4Q3LI73 84 aa4.69□□□□□ -1.66
SHOX-203ENST00000381578 KRTAP9-6A0A140TA67 174 aa4.65□□□□□ -1.66
SHOX-203ENST00000381578 KRTAP10-7P60409 375 aaPredicted RBP4.62□□□□□ -1.67
SHOX-203ENST00000381578 CRCT1Q9UGL9 99 aa4.61□□□□□ -1.67
SHOX-203ENST00000381578 KRTAP19-8Q3LI54 63 aa4.58□□□□□ -1.68
SHOX-203ENST00000381578 KRTAP9-3Q9BYQ3 159 aa4.57□□□□□ -1.68
SHOX-203ENST00000381578 MT1XP80297 61 aa4.55□□□□□ -1.68
SHOX-203ENST00000381578 KRTAP10-5P60370 271 aa4.55□□□□□ -1.68
SHOX-203ENST00000381578 KRTAP19-5Q3LI72 72 aa4.55□□□□□ -1.68
SHOX-203ENST00000381578 MT1BP07438 61 aa4.54□□□□□ -1.68
SHOX-203ENST00000381578 USH2AO75445 5202 aa4.51□□□□□ -1.69
SHOX-203ENST00000381578 LCE3CQ5T5A8 94 aa4.49□□□□□ -1.69
SHOX-203ENST00000381578 OBSCNQ5VST9 7968 aa4.47□□□□□ -1.69
SHOX-203ENST00000381578 KMT2DO14686 5537 aa4.4□□□□□ -1.71
SHOX-203ENST00000381578 KRTAP4-8A0A0G2JLE6 195 aa4.39□□□□□ -1.71
SHOX-203ENST00000381578 KRTAP4-8Q9BYQ9 185 aa4.39□□□□□ -1.71
SHOX-203ENST00000381578 KRTAP4-7Q9BYR0 210 aa4.39□□□□□ -1.71
SHOX-203ENST00000381578 SYNE1Q8NF91 8797 aaKnown RBP4.31□□□□□ -1.72
SHOX-203ENST00000381578 LCE4AQ5TA78 99 aa4.3□□□□□ -1.72
SHOX-203ENST00000381578 KRTAP9-7A8MTY7 169 aa4.25□□□□□ -1.73
SHOX-203ENST00000381578 KRTAP9-6A8MVA2 160 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms