RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 IGKV2-30P06310 120 aa9.46□□□□□ -0.89
PDX1-201ENST00000381033 A0A1B0GU69 56 aa9.45□□□□□ -0.9
PDX1-201ENST00000381033 EPPK1P58107 5090 aaKnown RBP9.45□□□□□ -0.9
PDX1-201ENST00000381033 RPS29P62273 56 aaKnown RBP9.44□□□□□ -0.9
PDX1-201ENST00000381033 DMBT1Q9UGM3 2413 aaPredicted RBP9.44□□□□□ -0.9
PDX1-201ENST00000381033 Q5VSD8 79 aa9.42□□□□□ -0.9
PDX1-201ENST00000381033 Q8N1X5 172 aa9.42□□□□□ -0.9
PDX1-201ENST00000381033 FAT3Q8TDW7 4589 aa9.4□□□□□ -0.9
PDX1-201ENST00000381033 K7ERS5 55 aa9.32□□□□□ -0.92
PDX1-201ENST00000381033 DMAC1Q96GE9 116 aa9.31□□□□□ -0.92
PDX1-201ENST00000381033 KRTAP10-8P60410 259 aa9.29□□□□□ -0.92
PDX1-201ENST00000381033 ACYP2P14621 99 aa9.28□□□□□ -0.92
PDX1-201ENST00000381033 SPINT4Q6UDR6 99 aa9.26□□□□□ -0.93
PDX1-201ENST00000381033 KRTAP15-1Q3LI76 137 aa9.19□□□□□ -0.94
PDX1-201ENST00000381033 MT1HL1P0DM35 61 aa9.14□□□□□ -0.95
PDX1-201ENST00000381033 ABCA13Q86UQ4 5058 aa9.1□□□□□ -0.95
PDX1-201ENST00000381033 KRTAP4-5Q9BYR2 181 aa9.1□□□□□ -0.95
PDX1-201ENST00000381033 LCE2DQ5TA82 110 aaPredicted RBP9.09□□□□□ -0.95
PDX1-201ENST00000381033 KRTAP3-1Q9BYR8 98 aa9.09□□□□□ -0.95
PDX1-201ENST00000381033 LPAP08519 4548 aa9.09□□□□□ -0.95
PDX1-201ENST00000381033 CRIPTQ9P021 101 aa9.08□□□□□ -0.96
PDX1-201ENST00000381033 LRP2P98164 4655 aa9.04□□□□□ -0.96
PDX1-201ENST00000381033 XP32Q5T750 250 aa9.02□□□□□ -0.97
PDX1-201ENST00000381033 RPL37P61927 97 aaKnown RBP8.95□□□□□ -0.98
PDX1-201ENST00000381033 KRTAP3-3Q9BYR6 98 aa8.9□□□□□ -0.98
PDX1-201ENST00000381033 KRTAP3-2Q9BYR7 98 aa8.9□□□□□ -0.98
PDX1-201ENST00000381033 COX6B2Q6YFQ2 88 aa8.87□□□□□ -0.99
PDX1-201ENST00000381033 HERC2O95714 4834 aa8.84□□□□□ -0.99
PDX1-201ENST00000381033 H0YAA0 97 aa8.84□□□□□ -0.99
PDX1-201ENST00000381033 TPRXLQ17RH7 258 aa8.75□□□□□ -1.01
PDX1-201ENST00000381033 BIRC6Q9NR09 4857 aa8.64□□□□□ -1.03
PDX1-201ENST00000381033 CAMK2N1Q7Z7J9 78 aa8.64□□□□□ -1.03
PDX1-201ENST00000381033 S4R3F8 94 aa8.58□□□□□ -1.04
PDX1-201ENST00000381033 MUC2Q02817 5179 aa8.58□□□□□ -1.04
PDX1-201ENST00000381033 A0A1B0GU33 70 aa8.57□□□□□ -1.04
PDX1-201ENST00000381033 PCLOQ9Y6V0 5065 aa8.55□□□□□ -1.04
PDX1-201ENST00000381033 HERC1Q15751 4861 aa8.55□□□□□ -1.04
PDX1-201ENST00000381033 H1FX-AS1Q4G0G2 97 aa8.54□□□□□ -1.04
PDX1-201ENST00000381033 MUC17Q685J3 4493 aa8.54□□□□□ -1.04
PDX1-201ENST00000381033 KRTAP10-6P60371 365 aaPredicted RBP8.52□□□□□ -1.05
PDX1-201ENST00000381033 C10orf95Q9H7T3 257 aa8.51□□□□□ -1.05
PDX1-201ENST00000381033 KRTAP4-1Q9BYQ7 146 aa8.49□□□□□ -1.05
PDX1-201ENST00000381033 KRTAP13-4Q3LI77 160 aa8.44□□□□□ -1.06
PDX1-201ENST00000381033 A0A0D9SG42 100 aa8.34□□□□□ -1.07
PDX1-201ENST00000381033 HMCN2Q8NDA2 5059 aa8.29□□□□□ -1.08
PDX1-201ENST00000381033 KRTAP19-2Q3LHN2 52 aa8.23□□□□□ -1.09
PDX1-201ENST00000381033 FAT4Q6V0I7 4981 aa8.16□□□□□ -1.1
PDX1-201ENST00000381033 PRO2289Q9P1D8 64 aa8.12□□□□□ -1.11
PDX1-201ENST00000381033 RNF213Q63HN8 5207 aa8.12□□□□□ -1.11
PDX1-201ENST00000381033 LORP23490 312 aaPredicted RBP8.11□□□□□ -1.11
PDX1-201ENST00000381033 KRTAP12-2P59991 146 aa8.11□□□□□ -1.11
PDX1-201ENST00000381033 PLAC4Q8WY50 150 aa8.08□□□□□ -1.12
PDX1-201ENST00000381033 UBR4Q5T4S7 5183 aa8.08□□□□□ -1.12
PDX1-201ENST00000381033 FLGP20930 4061 aaPredicted RBP8.07□□□□□ -1.12
PDX1-201ENST00000381033 KRTAP12-1P59990 96 aa8.03□□□□□ -1.12
PDX1-201ENST00000381033 M0QZ58 72 aa8.02□□□□□ -1.13
PDX1-201ENST00000381033 R4GN34 69 aa7.97□□□□□ -1.13
PDX1-201ENST00000381033 LCE2CQ5TA81 110 aa7.88□□□□□ -1.15
PDX1-201ENST00000381033 KRTAP23-1A1A580 65 aa7.77□□□□□ -1.17
PDX1-201ENST00000381033 LCE2BO14633 110 aa7.69□□□□□ -1.18
PDX1-201ENST00000381033 MT1HP80294 61 aa7.67□□□□□ -1.18
PDX1-201ENST00000381033 M0R2T5 61 aa7.67□□□□□ -1.18
PDX1-201ENST00000381033 INE1O15225 51 aa7.61□□□□□ -1.19
PDX1-201ENST00000381033 MT1FP04733 61 aa7.48□□□□□ -1.21
PDX1-201ENST00000381033 KRTAP19-1Q8IUB9 90 aa7.48□□□□□ -1.21
PDX1-201ENST00000381033 MT2AP02795 61 aa7.46□□□□□ -1.21
PDX1-201ENST00000381033 KRTAP9-8Q9BYQ0 159 aa7.46□□□□□ -1.22
PDX1-201ENST00000381033 KRTAP10-10P60014 251 aa7.43□□□□□ -1.22
PDX1-201ENST00000381033 SPRR2GQ9BYE4 73 aa7.41□□□□□ -1.22
PDX1-201ENST00000381033 SPRR5A0A1B0GTR4 108 aa7.27□□□□□ -1.25
PDX1-201ENST00000381033 LCE2AQ5TA79 106 aaPredicted RBP7.26□□□□□ -1.25
PDX1-201ENST00000381033 PP632Q6XCG6 107 aa7.22□□□□□ -1.25
PDX1-201ENST00000381033 TNP1P09430 55 aa7.15□□□□□ -1.26
PDX1-201ENST00000381033 KRTAP9-3Q9BYQ3 159 aa7.15□□□□□ -1.27
PDX1-201ENST00000381033 MT1BP07438 61 aa7.14□□□□□ -1.27
PDX1-201ENST00000381033 USH2AO75445 5202 aa7.13□□□□□ -1.27
PDX1-201ENST00000381033 KRTAP19-8Q3LI54 63 aa7.12□□□□□ -1.27
PDX1-201ENST00000381033 KRTAP10-5P60370 271 aa7.01□□□□□ -1.29
PDX1-201ENST00000381033 MT1XP80297 61 aa7.01□□□□□ -1.29
PDX1-201ENST00000381033 LCE3AQ5TA76 89 aa6.93□□□□□ -1.3
PDX1-201ENST00000381033 KRTAP10-7P60409 375 aaPredicted RBP6.84□□□□□ -1.31
PDX1-201ENST00000381033 KMT2DO14686 5537 aa6.82□□□□□ -1.32
PDX1-201ENST00000381033 FSIP2Q5CZC0 6907 aa6.73□□□□□ -1.33
PDX1-201ENST00000381033 KRTAP10-12P60413 245 aa6.72□□□□□ -1.33
PDX1-201ENST00000381033 KRTAP8-1Q8IUC2 63 aa6.66□□□□□ -1.34
PDX1-201ENST00000381033 SSPOA2VEC9 5147 aa6.58□□□□□ -1.36
PDX1-201ENST00000381033 KRTAP4-8A0A0G2JLE6 195 aa6.56□□□□□ -1.36
PDX1-201ENST00000381033 KRTAP12-3P60328 96 aa6.56□□□□□ -1.36
PDX1-201ENST00000381033 KRTAP4-8Q9BYQ9 185 aa6.56□□□□□ -1.36
PDX1-201ENST00000381033 KRTAP19-5Q3LI72 72 aa6.46□□□□□ -1.38
PDX1-201ENST00000381033 KRTAP19-7Q3SYF9 63 aa6.26□□□□□ -1.41
PDX1-201ENST00000381033 KRTAP19-6Q3LI70 58 aa6.25□□□□□ -1.41
PDX1-201ENST00000381033 FCGBPQ9Y6R7 5405 aaPredicted RBP6.19□□□□□ -1.42
PDX1-201ENST00000381033 KRTAP4-7Q9BYR0 210 aa6.16□□□□□ -1.42
PDX1-201ENST00000381033 LCE3CQ5T5A8 94 aa6.15□□□□□ -1.42
PDX1-201ENST00000381033 MUC12Q9UKN1 5478 aa6.09□□□□□ -1.43
PDX1-201ENST00000381033 MT1EP04732 61 aa6.06□□□□□ -1.44
PDX1-201ENST00000381033 KRTAP9-6A8MVA2 160 aa6.03□□□□□ -1.44
PDX1-201ENST00000381033 MT1LQ93083 61 aa6.02□□□□□ -1.45
PDX1-201ENST00000381033 MACF1Q9UPN3 7388 aaKnown RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms