RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 HYDINQ4G0P3 5121 aa5.53□□□□□ -1.52
USP6NL-202ENST00000379237 FAT2Q9NYQ8 4349 aa5.52□□□□□ -1.53
USP6NL-202ENST00000379237 DNAH6Q9C0G6 4158 aa5.52□□□□□ -1.53
USP6NL-202ENST00000379237 VPS13DQ5THJ4 4388 aa5.52□□□□□ -1.53
USP6NL-202ENST00000379237 DYNC2H1Q8NCM8 4307 aaKnown RBP5.52□□□□□ -1.53
USP6NL-202ENST00000379237 HECTD4Q9Y4D8 3996 aa5.52□□□□□ -1.53
USP6NL-202ENST00000379237 XP32Q5T750 250 aa5.5□□□□□ -1.53
USP6NL-202ENST00000379237 KRTAP3-2Q9BYR7 98 aa5.47□□□□□ -1.53
USP6NL-202ENST00000379237 KRTAP21-3Q3LHN1 58 aa5.44□□□□□ -1.54
USP6NL-202ENST00000379237 KRTAP3-3Q9BYR6 98 aa5.42□□□□□ -1.54
USP6NL-202ENST00000379237 DNAH8Q96JB1 4490 aa5.41□□□□□ -1.54
USP6NL-202ENST00000379237 PKHD1P08F94 4074 aa5.4□□□□□ -1.55
USP6NL-202ENST00000379237 DNAH17Q9UFH2 4485 aa5.38□□□□□ -1.55
USP6NL-202ENST00000379237 PP632Q6XCG6 107 aa5.37□□□□□ -1.55
USP6NL-202ENST00000379237 PKD1P98161 4303 aa5.35□□□□□ -1.55
USP6NL-202ENST00000379237 TNP1P09430 55 aa5.31□□□□□ -1.56
USP6NL-202ENST00000379237 DNAH11Q96DT5 4516 aa5.31□□□□□ -1.56
USP6NL-202ENST00000379237 KMT2CQ8NEZ4 4911 aaKnown RBP5.31□□□□□ -1.56
USP6NL-202ENST00000379237 DNAH5Q8TE73 4624 aa5.28□□□□□ -1.56
USP6NL-202ENST00000379237 SACSQ9NZJ4 4579 aa5.2□□□□□ -1.58
USP6NL-202ENST00000379237 VPS13BQ7Z7G8 4022 aa5.19□□□□□ -1.58
USP6NL-202ENST00000379237 LRP1BQ9NZR2 4599 aa5.17□□□□□ -1.58
USP6NL-202ENST00000379237 RYR3Q15413 4870 aa5.16□□□□□ -1.58
USP6NL-202ENST00000379237 PRO2289Q9P1D8 64 aa5.09□□□□□ -1.59
USP6NL-202ENST00000379237 A0A1B0GVY2 172 aa5.07□□□□□ -1.6
USP6NL-202ENST00000379237 KRTAP10-10P60014 251 aa5.05□□□□□ -1.6
USP6NL-202ENST00000379237 FAT1Q14517 4588 aa4.99□□□□□ -1.61
USP6NL-202ENST00000379237 RYR2Q92736 4967 aa4.97□□□□□ -1.61
USP6NL-202ENST00000379237 PKHD1L1Q86WI1 4243 aa4.97□□□□□ -1.61
USP6NL-202ENST00000379237 INE1O15225 51 aa4.94□□□□□ -1.62
USP6NL-202ENST00000379237 LORP23490 312 aaPredicted RBP4.94□□□□□ -1.62
USP6NL-202ENST00000379237 EPPK1P58107 5090 aaKnown RBP4.92□□□□□ -1.62
USP6NL-202ENST00000379237 APOBP04114 4563 aaKnown RBP4.92□□□□□ -1.62
USP6NL-202ENST00000379237 HSPG2P98160 4391 aa4.9□□□□□ -1.63
USP6NL-202ENST00000379237 LRP1Q07954 4544 aaKnown RBP4.89□□□□□ -1.63
USP6NL-202ENST00000379237 DYNC1H1Q14204 4646 aaKnown RBP4.89□□□□□ -1.63
USP6NL-202ENST00000379237 MYCBP2O75592 4640 aa4.88□□□□□ -1.63
USP6NL-202ENST00000379237 KRTAP10-4P60372 401 aaPredicted RBP4.86□□□□□ -1.63
USP6NL-202ENST00000379237 LPAP08519 4548 aa4.85□□□□□ -1.63
USP6NL-202ENST00000379237 RYR1P21817 5038 aa4.81□□□□□ -1.64
USP6NL-202ENST00000379237 ABCA13Q86UQ4 5058 aa4.81□□□□□ -1.64
USP6NL-202ENST00000379237 TNXBP22105 4242 aa4.76□□□□□ -1.65
USP6NL-202ENST00000379237 KIAA1109Q2LD37 5005 aa4.72□□□□□ -1.65
USP6NL-202ENST00000379237 FAT3Q8TDW7 4589 aa4.72□□□□□ -1.65
USP6NL-202ENST00000379237 KRTAP23-1A1A580 65 aa4.7□□□□□ -1.66
USP6NL-202ENST00000379237 KRTAP17-1Q9BYP8 105 aa4.67□□□□□ -1.66
USP6NL-202ENST00000379237 MT1HL1P0DM35 61 aa4.66□□□□□ -1.66
USP6NL-202ENST00000379237 SPRR5A0A1B0GTR4 108 aa4.65□□□□□ -1.67
USP6NL-202ENST00000379237 MUC2Q02817 5179 aa4.63□□□□□ -1.67
USP6NL-202ENST00000379237 KRTAP4-5Q9BYR2 181 aa4.62□□□□□ -1.67
USP6NL-202ENST00000379237 LCE3AQ5TA76 89 aa4.61□□□□□ -1.67
USP6NL-202ENST00000379237 PCLOQ9Y6V0 5065 aa4.56□□□□□ -1.68
USP6NL-202ENST00000379237 LRP2P98164 4655 aa4.54□□□□□ -1.68
USP6NL-202ENST00000379237 HERC1Q15751 4861 aa4.51□□□□□ -1.69
USP6NL-202ENST00000379237 KRTAP12-3P60328 96 aa4.44□□□□□ -1.7
USP6NL-202ENST00000379237 KRTAP4-1Q9BYQ7 146 aa4.42□□□□□ -1.7
USP6NL-202ENST00000379237 CRCT1Q9UGL9 99 aa4.38□□□□□ -1.71
USP6NL-202ENST00000379237 KRTAP10-12P60413 245 aa4.36□□□□□ -1.71
USP6NL-202ENST00000379237 HERC2O95714 4834 aa4.34□□□□□ -1.71
USP6NL-202ENST00000379237 FAT4Q6V0I7 4981 aa4.33□□□□□ -1.72
USP6NL-202ENST00000379237 RNF213Q63HN8 5207 aa4.33□□□□□ -1.72
USP6NL-202ENST00000379237 MUC17Q685J3 4493 aa4.3□□□□□ -1.72
USP6NL-202ENST00000379237 KRTAP8-1Q8IUC2 63 aa4.29□□□□□ -1.72
USP6NL-202ENST00000379237 UBR4Q5T4S7 5183 aa4.23□□□□□ -1.73
USP6NL-202ENST00000379237 SPRR2GQ9BYE4 73 aa4.19□□□□□ -1.74
USP6NL-202ENST00000379237 HMCN2Q8NDA2 5059 aa4.17□□□□□ -1.74
USP6NL-202ENST00000379237 FLGP20930 4061 aaPredicted RBP4.17□□□□□ -1.74
USP6NL-202ENST00000379237 BIRC6Q9NR09 4857 aa4.14□□□□□ -1.75
USP6NL-202ENST00000379237 KRTAP19-1Q8IUB9 90 aa4.12□□□□□ -1.75
USP6NL-202ENST00000379237 LCE3CQ5T5A8 94 aa4.07□□□□□ -1.76
USP6NL-202ENST00000379237 KRTAP10-5P60370 271 aa4.03□□□□□ -1.76
USP6NL-202ENST00000379237 KRTAP19-2Q3LHN2 52 aa4.03□□□□□ -1.76
USP6NL-202ENST00000379237 MT1HP80294 61 aa4□□□□□ -1.77
USP6NL-202ENST00000379237 KRTAP19-5Q3LI72 72 aa4□□□□□ -1.77
USP6NL-202ENST00000379237 KRTAP10-7P60409 375 aaPredicted RBP4□□□□□ -1.77
USP6NL-202ENST00000379237 MT1FP04733 61 aa3.97□□□□□ -1.77
USP6NL-202ENST00000379237 MT2AP02795 61 aa3.97□□□□□ -1.77
USP6NL-202ENST00000379237 MT1XP80297 61 aa3.94□□□□□ -1.78
USP6NL-202ENST00000379237 KRTAP19-8Q3LI54 63 aa3.85□□□□□ -1.79
USP6NL-202ENST00000379237 USH2AO75445 5202 aa3.85□□□□□ -1.79
USP6NL-202ENST00000379237 MT1BP07438 61 aa3.84□□□□□ -1.8
USP6NL-202ENST00000379237 KRTAP12-4P60329 112 aa3.83□□□□□ -1.8
USP6NL-202ENST00000379237 KRTAP4-7Q9BYR0 210 aa3.77□□□□□ -1.81
USP6NL-202ENST00000379237 LCE2CQ5TA81 110 aa3.77□□□□□ -1.81
USP6NL-202ENST00000379237 SYNE1Q8NF91 8797 aaKnown RBP3.75□□□□□ -1.81
USP6NL-202ENST00000379237 SPRR2FQ96RM1 72 aa3.74□□□□□ -1.81
USP6NL-202ENST00000379237 KRTAP9-6A8MVA2 160 aa3.72□□□□□ -1.81
USP6NL-202ENST00000379237 KRTAP2-3P0C7H8 128 aa3.72□□□□□ -1.81
USP6NL-202ENST00000379237 KRTAP2-4Q9BYR9 128 aa3.72□□□□□ -1.81
USP6NL-202ENST00000379237 KRTAP2-1Q9BYU5 128 aa3.72□□□□□ -1.81
USP6NL-202ENST00000379237 KRTAP4-8A0A0G2JLE6 195 aa3.71□□□□□ -1.81
USP6NL-202ENST00000379237 KRTAP9-8Q9BYQ0 159 aa3.71□□□□□ -1.81
USP6NL-202ENST00000379237 KRTAP4-8Q9BYQ9 185 aa3.71□□□□□ -1.81
USP6NL-202ENST00000379237 KMT2DO14686 5537 aa3.65□□□□□ -1.82
USP6NL-202ENST00000379237 FSIP2Q5CZC0 6907 aa3.61□□□□□ -1.83
USP6NL-202ENST00000379237 MT1GP13640 62 aa3.54□□□□□ -1.84
USP6NL-202ENST00000379237 KRTAP9-3Q9BYQ3 159 aa3.54□□□□□ -1.84
USP6NL-202ENST00000379237 KRTAP19-4Q3LI73 84 aa3.54□□□□□ -1.84
USP6NL-202ENST00000379237 LCE3BQ5TA77 95 aa3.52□□□□□ -1.85
USP6NL-202ENST00000379237 MT1LQ93083 61 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 208.9 ms