RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 LINC00643Q86TS7 51 aa11.05□□□□□ -0.64
TNFRSF4-201ENST00000379236 A6NN06 94 aa11.04□□□□□ -0.64
TNFRSF4-201ENST00000379236 MT1BP07438 61 aa11.02□□□□□ -0.65
TNFRSF4-201ENST00000379236 KRTAP19-8Q3LI54 63 aa11.02□□□□□ -0.65
TNFRSF4-201ENST00000379236 NDUFC1O43677 76 aa11□□□□□ -0.65
TNFRSF4-201ENST00000379236 IMUPQ9GZP8 106 aa10.99□□□□□ -0.65
TNFRSF4-201ENST00000379236 CRIPTQ9P021 101 aa10.98□□□□□ -0.65
TNFRSF4-201ENST00000379236 KRTAP6-3Q3LI67 103 aa10.97□□□□□ -0.65
TNFRSF4-201ENST00000379236 LINC00208Q96KT6 92 aa10.94□□□□□ -0.66
TNFRSF4-201ENST00000379236 A8MUN3 132 aa10.93□□□□□ -0.66
TNFRSF4-201ENST00000379236 MP68P56378 58 aa10.92□□□□□ -0.66
TNFRSF4-201ENST00000379236 A0A1B0GV90 55 aa10.87□□□□□ -0.67
TNFRSF4-201ENST00000379236 H0YAA0 97 aa10.84□□□□□ -0.67
TNFRSF4-201ENST00000379236 KRTAP10-5P60370 271 aa10.82□□□□□ -0.68
TNFRSF4-201ENST00000379236 OCR1Q9BZK8 76 aa10.82□□□□□ -0.68
TNFRSF4-201ENST00000379236 J3QR89 54 aa10.79□□□□□ -0.68
TNFRSF4-201ENST00000379236 ADM2Q7Z4H4 148 aa10.77□□□□□ -0.69
TNFRSF4-201ENST00000379236 H3BPC8 53 aa10.71□□□□□ -0.69
TNFRSF4-201ENST00000379236 SCGB1A1P11684 91 aa10.71□□□□□ -0.69
TNFRSF4-201ENST00000379236 C20orf197Q8N268 126 aa10.58□□□□□ -0.72
TNFRSF4-201ENST00000379236 DMAC1Q96GE9 116 aa10.56□□□□□ -0.72
TNFRSF4-201ENST00000379236 R4GN34 69 aa10.55□□□□□ -0.72
TNFRSF4-201ENST00000379236 NEBP20929 6669 aa10.54□□□□□ -0.72
TNFRSF4-201ENST00000379236 PLAC4Q8WY50 150 aa10.52□□□□□ -0.73
TNFRSF4-201ENST00000379236 MUC12Q9UKN1 5478 aa10.52□□□□□ -0.73
TNFRSF4-201ENST00000379236 PRO2289Q9P1D8 64 aa10.51□□□□□ -0.73
TNFRSF4-201ENST00000379236 P0C880 135 aa10.46□□□□□ -0.73
TNFRSF4-201ENST00000379236 M0QZ58 72 aa10.45□□□□□ -0.74
TNFRSF4-201ENST00000379236 KRTAP5-9P26371 169 aa10.41□□□□□ -0.74
TNFRSF4-201ENST00000379236 TRAV7A0A075B6U4 112 aa10.38□□□□□ -0.75
TNFRSF4-201ENST00000379236 ACYP2P14621 99 aa10.36□□□□□ -0.75
TNFRSF4-201ENST00000379236 SMIM20Q8N5G0 67 aa10.36□□□□□ -0.75
TNFRSF4-201ENST00000379236 MT1XP80297 61 aa10.33□□□□□ -0.76
TNFRSF4-201ENST00000379236 MT-ATP8P03928 68 aa10.32□□□□□ -0.76
TNFRSF4-201ENST00000379236 LINC01554Q52M75 96 aa10.32□□□□□ -0.76
TNFRSF4-201ENST00000379236 K7ERU9 68 aa10.31□□□□□ -0.76
TNFRSF4-201ENST00000379236 SPTSSBQ8NFR3 76 aa10.31□□□□□ -0.76
TNFRSF4-201ENST00000379236 KRTAP3-2Q9BYR7 98 aa10.3□□□□□ -0.76
TNFRSF4-201ENST00000379236 KMT2DO14686 5537 aa10.27□□□□□ -0.77
TNFRSF4-201ENST00000379236 CHKB-CPT1BH3BT56 60 aa10.23□□□□□ -0.77
TNFRSF4-201ENST00000379236 KRTAP20-1Q3LI63 56 aa10.23□□□□□ -0.77
TNFRSF4-201ENST00000379236 MDN1Q9NU22 5596 aa10.23□□□□□ -0.77
TNFRSF4-201ENST00000379236 SPRR2FQ96RM1 72 aa10.18□□□□□ -0.78
TNFRSF4-201ENST00000379236 KRTAP8-1Q8IUC2 63 aa10.14□□□□□ -0.79
TNFRSF4-201ENST00000379236 KRTAP12-2P59991 146 aa10.12□□□□□ -0.79
TNFRSF4-201ENST00000379236 SNURFQ9Y675 71 aa10.12□□□□□ -0.79
TNFRSF4-201ENST00000379236 SPRR2EP22531 72 aa10.05□□□□□ -0.8
TNFRSF4-201ENST00000379236 SPRR2BP35325 72 aa10.05□□□□□ -0.8
TNFRSF4-201ENST00000379236 SPRR2AP35326 72 aa10.05□□□□□ -0.8
TNFRSF4-201ENST00000379236 SPANXA2-OT1Q8N9U9 137 aa9.99□□□□□ -0.81
TNFRSF4-201ENST00000379236 SERP2Q8N6R1 65 aa9.94□□□□□ -0.82
TNFRSF4-201ENST00000379236 KRTAP2-3P0C7H8 128 aa9.93□□□□□ -0.82
TNFRSF4-201ENST00000379236 KRTAP2-4Q9BYR9 128 aa9.93□□□□□ -0.82
TNFRSF4-201ENST00000379236 KRTAP4-8A0A0G2JLE6 195 aa9.9□□□□□ -0.82
TNFRSF4-201ENST00000379236 KRTAP4-8Q9BYQ9 185 aa9.9□□□□□ -0.82
TNFRSF4-201ENST00000379236 KRTAP10-7P60409 375 aaPredicted RBP9.88□□□□□ -0.83
TNFRSF4-201ENST00000379236 KRTAP10-12P60413 245 aa9.82□□□□□ -0.84
TNFRSF4-201ENST00000379236 LCE1AQ5T7P2 110 aa9.82□□□□□ -0.84
TNFRSF4-201ENST00000379236 COA5Q86WW8 74 aa9.74□□□□□ -0.85
TNFRSF4-201ENST00000379236 SPRR2DP22532 72 aa9.73□□□□□ -0.85
TNFRSF4-201ENST00000379236 KRTAP13-4Q3LI77 160 aa9.72□□□□□ -0.85
TNFRSF4-201ENST00000379236 CAMK2N1Q7Z7J9 78 aa9.72□□□□□ -0.85
TNFRSF4-201ENST00000379236 SEC61GP60059 68 aa9.69□□□□□ -0.86
TNFRSF4-201ENST00000379236 SERP1Q9Y6X1 66 aa9.66□□□□□ -0.86
TNFRSF4-201ENST00000379236 COX7CP15954 63 aa9.61□□□□□ -0.87
TNFRSF4-201ENST00000379236 KRTAP2-2Q9BYT5 123 aa9.61□□□□□ -0.87
TNFRSF4-201ENST00000379236 KRTAP2-1Q9BYU5 128 aa9.61□□□□□ -0.87
TNFRSF4-201ENST00000379236 A0A0D9SG42 100 aa9.53□□□□□ -0.88
TNFRSF4-201ENST00000379236 A0A1B0GU33 70 aa9.45□□□□□ -0.9
TNFRSF4-201ENST00000379236 SPATA8Q6RVD6 105 aa9.45□□□□□ -0.9
TNFRSF4-201ENST00000379236 H7BZZ5 65 aa9.44□□□□□ -0.9
TNFRSF4-201ENST00000379236 LCE3BQ5TA77 95 aa9.44□□□□□ -0.9
TNFRSF4-201ENST00000379236 SPINT4Q6UDR6 99 aa9.43□□□□□ -0.9
TNFRSF4-201ENST00000379236 CYSTM1Q9H1C7 97 aa9.39□□□□□ -0.91
TNFRSF4-201ENST00000379236 A0A1B0GU69 56 aa9.3□□□□□ -0.92
TNFRSF4-201ENST00000379236 ANAPC13Q9BS18 74 aa9.27□□□□□ -0.93
TNFRSF4-201ENST00000379236 KRTAP12-1P59990 96 aa9.25□□□□□ -0.93
TNFRSF4-201ENST00000379236 SMIM26A0A096LP01 95 aa9.22□□□□□ -0.93
TNFRSF4-201ENST00000379236 PCP4P48539 62 aa9.22□□□□□ -0.93
TNFRSF4-201ENST00000379236 KRTAP19-7Q3SYF9 63 aa9.22□□□□□ -0.93
TNFRSF4-201ENST00000379236 MT1EP04732 61 aa9.17□□□□□ -0.94
TNFRSF4-201ENST00000379236 LCE5AQ5TCM9 118 aa9.13□□□□□ -0.95
TNFRSF4-201ENST00000379236 KRTAP19-3Q7Z4W3 81 aa9.13□□□□□ -0.95
TNFRSF4-201ENST00000379236 A8MU10 97 aa9.07□□□□□ -0.96
TNFRSF4-201ENST00000379236 PRR15LQ9BU68 103 aa9.05□□□□□ -0.96
TNFRSF4-201ENST00000379236 KRTAP19-5Q3LI72 72 aa9.03□□□□□ -0.96
TNFRSF4-201ENST00000379236 CCDC179H3BU77 68 aa9.02□□□□□ -0.97
TNFRSF4-201ENST00000379236 ATP5EP56381 51 aaPredicted RBP9.02□□□□□ -0.97
TNFRSF4-201ENST00000379236 DSTQ03001 7570 aaKnown RBP9.01□□□□□ -0.97
TNFRSF4-201ENST00000379236 TNP1P09430 55 aa8.92□□□□□ -0.98
TNFRSF4-201ENST00000379236 MT1GP13640 62 aa8.92□□□□□ -0.98
TNFRSF4-201ENST00000379236 PP632Q6XCG6 107 aa8.92□□□□□ -0.98
TNFRSF4-201ENST00000379236 C10orf95Q9H7T3 257 aa8.84□□□□□ -0.99
TNFRSF4-201ENST00000379236 LINC01558Q9Y6Z2 57 aa8.83□□□□□ -1
TNFRSF4-201ENST00000379236 LCE3AQ5TA76 89 aa8.82□□□□□ -1
TNFRSF4-201ENST00000379236 KRTAP4-9Q9BYQ8 210 aa8.77□□□□□ -1.01
TNFRSF4-201ENST00000379236 MT1LQ93083 61 aa8.76□□□□□ -1.01
TNFRSF4-201ENST00000379236 MT1MQ8N339 61 aa8.75□□□□□ -1.01
TNFRSF4-201ENST00000379236 TMEM258P61165 79 aa8.72□□□□□ -1.01
TNFRSF4-201ENST00000379236 UQCR11O14957 56 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms