RNA–Protein interactions for RNA: ENST00000378755.9

ATAD3A-202, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 2 BASIC

Gene ATAD3A, Length 2,612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-202ENST00000378755 SMR3BP02814 79 aaPredicted RBP10.89□□□□□ -0.67
ATAD3A-202ENST00000378755 DYNC1H1Q14204 4646 aaKnown RBP10.85□□□□□ -0.67
ATAD3A-202ENST00000378755 A0A1B0GVY2 172 aa10.82□□□□□ -0.68
ATAD3A-202ENST00000378755 KRTAP10-6P60371 365 aaPredicted RBP10.81□□□□□ -0.68
ATAD3A-202ENST00000378755 KRTAP10-4P60372 401 aaPredicted RBP10.78□□□□□ -0.68
ATAD3A-202ENST00000378755 PKHD1L1Q86WI1 4243 aa10.78□□□□□ -0.68
ATAD3A-202ENST00000378755 APOBP04114 4563 aaKnown RBP10.75□□□□□ -0.69
ATAD3A-202ENST00000378755 FAT1Q14517 4588 aa10.7□□□□□ -0.7
ATAD3A-202ENST00000378755 KRTAP3-2Q9BYR7 98 aa10.67□□□□□ -0.7
ATAD3A-202ENST00000378755 KRTAP3-3Q9BYR6 98 aa10.65□□□□□ -0.71
ATAD3A-202ENST00000378755 S4R3F8 94 aa10.62□□□□□ -0.71
ATAD3A-202ENST00000378755 KRTAP12-2P59991 146 aa10.62□□□□□ -0.71
ATAD3A-202ENST00000378755 A0A0A0MQY5 61 aa10.6□□□□□ -0.71
ATAD3A-202ENST00000378755 RYR2Q92736 4967 aa10.54□□□□□ -0.72
ATAD3A-202ENST00000378755 KMT2CQ8NEZ4 4911 aaKnown RBP10.46□□□□□ -0.73
ATAD3A-202ENST00000378755 KRTAP12-1P59990 96 aa10.41□□□□□ -0.74
ATAD3A-202ENST00000378755 FAT3Q8TDW7 4589 aa10.39□□□□□ -0.75
ATAD3A-202ENST00000378755 KRTAP10-8P60410 259 aa10.38□□□□□ -0.75
ATAD3A-202ENST00000378755 XP32Q5T750 250 aa10.37□□□□□ -0.75
ATAD3A-202ENST00000378755 TNXBP22105 4242 aa10.37□□□□□ -0.75
ATAD3A-202ENST00000378755 Q5VSD8 79 aa10.33□□□□□ -0.76
ATAD3A-202ENST00000378755 HSPG2P98160 4391 aa10.3□□□□□ -0.76
ATAD3A-202ENST00000378755 LRP1Q07954 4544 aaKnown RBP10.28□□□□□ -0.76
ATAD3A-202ENST00000378755 LUZP6Q538Z0 58 aa10.24□□□□□ -0.77
ATAD3A-202ENST00000378755 RYR3Q15413 4870 aa10.23□□□□□ -0.77
ATAD3A-202ENST00000378755 MYCBP2O75592 4640 aa10.13□□□□□ -0.79
ATAD3A-202ENST00000378755 RYR1P21817 5038 aa10.11□□□□□ -0.79
ATAD3A-202ENST00000378755 PLAC4Q8WY50 150 aa10.08□□□□□ -0.8
ATAD3A-202ENST00000378755 KRTAP17-1Q9BYP8 105 aa10.08□□□□□ -0.8
ATAD3A-202ENST00000378755 MT1HL1P0DM35 61 aa10.04□□□□□ -0.8
ATAD3A-202ENST00000378755 M0QZ58 72 aa9.96□□□□□ -0.81
ATAD3A-202ENST00000378755 LPAP08519 4548 aa9.92□□□□□ -0.82
ATAD3A-202ENST00000378755 EPPK1P58107 5090 aaKnown RBP9.88□□□□□ -0.83
ATAD3A-202ENST00000378755 KIAA1109Q2LD37 5005 aa9.88□□□□□ -0.83
ATAD3A-202ENST00000378755 R4GN34 69 aa9.72□□□□□ -0.85
ATAD3A-202ENST00000378755 LRP2P98164 4655 aa9.69□□□□□ -0.86
ATAD3A-202ENST00000378755 LORP23490 312 aaPredicted RBP9.63□□□□□ -0.87
ATAD3A-202ENST00000378755 KRTAP4-5Q9BYR2 181 aa9.57□□□□□ -0.88
ATAD3A-202ENST00000378755 ABCA13Q86UQ4 5058 aa9.51□□□□□ -0.89
ATAD3A-202ENST00000378755 SEC61BP60468 96 aaKnown RBP9.49□□□□□ -0.89
ATAD3A-202ENST00000378755 PP632Q6XCG6 107 aa9.4□□□□□ -0.9
ATAD3A-202ENST00000378755 BIRC6Q9NR09 4857 aa9.39□□□□□ -0.91
ATAD3A-202ENST00000378755 MUC17Q685J3 4493 aa9.37□□□□□ -0.91
ATAD3A-202ENST00000378755 CAMK2N1Q7Z7J9 78 aa9.35□□□□□ -0.91
ATAD3A-202ENST00000378755 J3QL48 77 aa9.34□□□□□ -0.91
ATAD3A-202ENST00000378755 KRTAP4-1Q9BYQ7 146 aa9.31□□□□□ -0.92
ATAD3A-202ENST00000378755 HERC2O95714 4834 aa9.27□□□□□ -0.93
ATAD3A-202ENST00000378755 KRTAP19-2Q3LHN2 52 aa9.16□□□□□ -0.94
ATAD3A-202ENST00000378755 SPRR5A0A1B0GTR4 108 aa9.14□□□□□ -0.95
ATAD3A-202ENST00000378755 PCLOQ9Y6V0 5065 aa9.09□□□□□ -0.95
ATAD3A-202ENST00000378755 TNP1P09430 55 aa9□□□□□ -0.97
ATAD3A-202ENST00000378755 PRO2289Q9P1D8 64 aa8.91□□□□□ -0.98
ATAD3A-202ENST00000378755 FLGP20930 4061 aaPredicted RBP8.9□□□□□ -0.99
ATAD3A-202ENST00000378755 HERC1Q15751 4861 aa8.87□□□□□ -0.99
ATAD3A-202ENST00000378755 MUC2Q02817 5179 aa8.81□□□□□ -1
ATAD3A-202ENST00000378755 KRTAP23-1A1A580 65 aa8.79□□□□□ -1
ATAD3A-202ENST00000378755 HMCN2Q8NDA2 5059 aa8.69□□□□□ -1.02
ATAD3A-202ENST00000378755 LCE2CQ5TA81 110 aa8.62□□□□□ -1.03
ATAD3A-202ENST00000378755 INE1O15225 51 aa8.58□□□□□ -1.04
ATAD3A-202ENST00000378755 LCE3AQ5TA76 89 aa8.58□□□□□ -1.04
ATAD3A-202ENST00000378755 SPRR2GQ9BYE4 73 aa8.47□□□□□ -1.05
ATAD3A-202ENST00000378755 M0R2T5 61 aa8.42□□□□□ -1.06
ATAD3A-202ENST00000378755 FAT4Q6V0I7 4981 aa8.4□□□□□ -1.06
ATAD3A-202ENST00000378755 UBR4Q5T4S7 5183 aa8.4□□□□□ -1.06
ATAD3A-202ENST00000378755 KRTAP19-1Q8IUB9 90 aa8.4□□□□□ -1.07
ATAD3A-202ENST00000378755 MT1HP80294 61 aa8.39□□□□□ -1.07
ATAD3A-202ENST00000378755 RNF213Q63HN8 5207 aa8.32□□□□□ -1.08
ATAD3A-202ENST00000378755 MT2AP02795 61 aa8.26□□□□□ -1.09
ATAD3A-202ENST00000378755 MT1FP04733 61 aa8.25□□□□□ -1.09
ATAD3A-202ENST00000378755 KRTAP10-10P60014 251 aa8.25□□□□□ -1.09
ATAD3A-202ENST00000378755 KRTAP9-8Q9BYQ0 159 aa8.2□□□□□ -1.1
ATAD3A-202ENST00000378755 KRTAP8-1Q8IUC2 63 aa8.17□□□□□ -1.1
ATAD3A-202ENST00000378755 KRTAP19-8Q3LI54 63 aa8.11□□□□□ -1.11
ATAD3A-202ENST00000378755 KRTAP10-12P60413 245 aa8.06□□□□□ -1.12
ATAD3A-202ENST00000378755 KRTAP12-3P60328 96 aa8.04□□□□□ -1.12
ATAD3A-202ENST00000378755 MT1BP07438 61 aa7.98□□□□□ -1.13
ATAD3A-202ENST00000378755 KRTAP10-5P60370 271 aa7.92□□□□□ -1.14
ATAD3A-202ENST00000378755 MT1XP80297 61 aa7.91□□□□□ -1.14
ATAD3A-202ENST00000378755 KRTAP9-3Q9BYQ3 159 aa7.86□□□□□ -1.15
ATAD3A-202ENST00000378755 KRTAP10-7P60409 375 aaPredicted RBP7.77□□□□□ -1.17
ATAD3A-202ENST00000378755 LCE3CQ5T5A8 94 aa7.6□□□□□ -1.19
ATAD3A-202ENST00000378755 KRTAP9-6A8MVA2 160 aa7.55□□□□□ -1.2
ATAD3A-202ENST00000378755 LCE2BO14633 110 aa7.54□□□□□ -1.2
ATAD3A-202ENST00000378755 KRTAP19-5Q3LI72 72 aa7.53□□□□□ -1.2
ATAD3A-202ENST00000378755 KMT2DO14686 5537 aa7.5□□□□□ -1.21
ATAD3A-202ENST00000378755 LCE2AQ5TA79 106 aaPredicted RBP7.48□□□□□ -1.21
ATAD3A-202ENST00000378755 KRTAP2-3P0C7H8 128 aa7.36□□□□□ -1.23
ATAD3A-202ENST00000378755 KRTAP2-4Q9BYR9 128 aa7.36□□□□□ -1.23
ATAD3A-202ENST00000378755 KRTAP2-1Q9BYU5 128 aa7.36□□□□□ -1.23
ATAD3A-202ENST00000378755 KRTAP4-7Q9BYR0 210 aa7.3□□□□□ -1.24
ATAD3A-202ENST00000378755 USH2AO75445 5202 aa7.24□□□□□ -1.25
ATAD3A-202ENST00000378755 KRTAP4-8A0A0G2JLE6 195 aa7.2□□□□□ -1.26
ATAD3A-202ENST00000378755 KRTAP4-8Q9BYQ9 185 aa7.2□□□□□ -1.26
ATAD3A-202ENST00000378755 KRTAP19-7Q3SYF9 63 aa7.04□□□□□ -1.28
ATAD3A-202ENST00000378755 FSIP2Q5CZC0 6907 aa6.97□□□□□ -1.29
ATAD3A-202ENST00000378755 KRTAP19-4Q3LI73 84 aa6.92□□□□□ -1.3
ATAD3A-202ENST00000378755 SSPOA2VEC9 5147 aa6.88□□□□□ -1.31
ATAD3A-202ENST00000378755 MT1EP04732 61 aa6.86□□□□□ -1.31
ATAD3A-202ENST00000378755 MT1LQ93083 61 aa6.85□□□□□ -1.31
ATAD3A-202ENST00000378755 KRTAP19-6Q3LI70 58 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms