RNA–Protein interactions for RNA: ENST00000378313.6

C19orf54-201, Transcript of chromosome 19 open reading frame 54, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C19orf54, Length 2,753 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-201ENST00000378313 KRTAP10-4P60372 401 aaPredicted RBP8.24□□□□□ -1.09
C19orf54-201ENST00000378313 APOBP04114 4563 aaKnown RBP8.24□□□□□ -1.09
C19orf54-201ENST00000378313 A0A0D9SG42 100 aa8.22□□□□□ -1.09
C19orf54-201ENST00000378313 NDUFAF8A1L188 74 aa8.22□□□□□ -1.09
C19orf54-201ENST00000378313 KRTAP21-3Q3LHN1 58 aa8.22□□□□□ -1.09
C19orf54-201ENST00000378313 C10orf95Q9H7T3 257 aa8.18□□□□□ -1.1
C19orf54-201ENST00000378313 S4R3F8 94 aa8.17□□□□□ -1.1
C19orf54-201ENST00000378313 DYNC1H1Q14204 4646 aaKnown RBP8.13□□□□□ -1.11
C19orf54-201ENST00000378313 FAT1Q14517 4588 aa8.07□□□□□ -1.12
C19orf54-201ENST00000378313 KRTAP12-2P59991 146 aa8.06□□□□□ -1.12
C19orf54-201ENST00000378313 KRTAP10-8P60410 259 aa8.06□□□□□ -1.12
C19orf54-201ENST00000378313 A0A1B0GVY2 172 aa8.05□□□□□ -1.12
C19orf54-201ENST00000378313 DMBT1Q9UGM3 2413 aaPredicted RBP8.03□□□□□ -1.12
C19orf54-201ENST00000378313 FAT3Q8TDW7 4589 aa8.03□□□□□ -1.12
C19orf54-201ENST00000378313 KRTAP12-1P59990 96 aa8□□□□□ -1.13
C19orf54-201ENST00000378313 LRP1Q07954 4544 aaKnown RBP7.99□□□□□ -1.13
C19orf54-201ENST00000378313 XP32Q5T750 250 aa7.99□□□□□ -1.13
C19orf54-201ENST00000378313 TNXBP22105 4242 aa7.98□□□□□ -1.13
C19orf54-201ENST00000378313 M0QZ58 72 aa7.92□□□□□ -1.14
C19orf54-201ENST00000378313 HSPG2P98160 4391 aa7.91□□□□□ -1.14
C19orf54-201ENST00000378313 KMT2CQ8NEZ4 4911 aaKnown RBP7.89□□□□□ -1.15
C19orf54-201ENST00000378313 A0A0A0MQY5 61 aa7.8□□□□□ -1.16
C19orf54-201ENST00000378313 RYR3Q15413 4870 aa7.71□□□□□ -1.18
C19orf54-201ENST00000378313 Q5VSD8 79 aa7.69□□□□□ -1.18
C19orf54-201ENST00000378313 MYCBP2O75592 4640 aa7.66□□□□□ -1.18
C19orf54-201ENST00000378313 LUZP6Q538Z0 58 aa7.65□□□□□ -1.19
C19orf54-201ENST00000378313 RYR2Q92736 4967 aa7.63□□□□□ -1.19
C19orf54-201ENST00000378313 PLAC4Q8WY50 150 aa7.61□□□□□ -1.19
C19orf54-201ENST00000378313 R4GN34 69 aa7.58□□□□□ -1.2
C19orf54-201ENST00000378313 MT1HL1P0DM35 61 aa7.58□□□□□ -1.2
C19orf54-201ENST00000378313 LPAP08519 4548 aa7.52□□□□□ -1.21
C19orf54-201ENST00000378313 EPPK1P58107 5090 aaKnown RBP7.45□□□□□ -1.22
C19orf54-201ENST00000378313 LRP2P98164 4655 aa7.43□□□□□ -1.22
C19orf54-201ENST00000378313 KRTAP17-1Q9BYP8 105 aa7.43□□□□□ -1.22
C19orf54-201ENST00000378313 RYR1P21817 5038 aa7.43□□□□□ -1.22
C19orf54-201ENST00000378313 PP632Q6XCG6 107 aa7.42□□□□□ -1.22
C19orf54-201ENST00000378313 LORP23490 312 aaPredicted RBP7.38□□□□□ -1.23
C19orf54-201ENST00000378313 KIAA1109Q2LD37 5005 aa7.28□□□□□ -1.24
C19orf54-201ENST00000378313 SEC61BP60468 96 aaKnown RBP7.26□□□□□ -1.25
C19orf54-201ENST00000378313 CAMK2N1Q7Z7J9 78 aa7.23□□□□□ -1.25
C19orf54-201ENST00000378313 MUC17Q685J3 4493 aa7.21□□□□□ -1.26
C19orf54-201ENST00000378313 KRTAP4-1Q9BYQ7 146 aa7.13□□□□□ -1.27
C19orf54-201ENST00000378313 KRTAP23-1A1A580 65 aa7.13□□□□□ -1.27
C19orf54-201ENST00000378313 KRTAP19-2Q3LHN2 52 aa7.11□□□□□ -1.27
C19orf54-201ENST00000378313 ABCA13Q86UQ4 5058 aa7.06□□□□□ -1.28
C19orf54-201ENST00000378313 SPRR5A0A1B0GTR4 108 aa7.06□□□□□ -1.28
C19orf54-201ENST00000378313 TNP1P09430 55 aa7.05□□□□□ -1.28
C19orf54-201ENST00000378313 BIRC6Q9NR09 4857 aa6.94□□□□□ -1.3
C19orf54-201ENST00000378313 KRTAP4-5Q9BYR2 181 aa6.93□□□□□ -1.3
C19orf54-201ENST00000378313 PCLOQ9Y6V0 5065 aa6.91□□□□□ -1.3
C19orf54-201ENST00000378313 HERC2O95714 4834 aa6.89□□□□□ -1.31
C19orf54-201ENST00000378313 FLGP20930 4061 aaPredicted RBP6.87□□□□□ -1.31
C19orf54-201ENST00000378313 HERC1Q15751 4861 aa6.84□□□□□ -1.31
C19orf54-201ENST00000378313 PRO2289Q9P1D8 64 aa6.8□□□□□ -1.32
C19orf54-201ENST00000378313 J3QL48 77 aa6.77□□□□□ -1.33
C19orf54-201ENST00000378313 SPRR2GQ9BYE4 73 aa6.69□□□□□ -1.34
C19orf54-201ENST00000378313 INE1O15225 51 aa6.63□□□□□ -1.35
C19orf54-201ENST00000378313 LCE3AQ5TA76 89 aa6.6□□□□□ -1.35
C19orf54-201ENST00000378313 KRTAP19-1Q8IUB9 90 aa6.59□□□□□ -1.35
C19orf54-201ENST00000378313 MUC2Q02817 5179 aa6.55□□□□□ -1.36
C19orf54-201ENST00000378313 LCE2CQ5TA81 110 aa6.51□□□□□ -1.37
C19orf54-201ENST00000378313 KRTAP8-1Q8IUC2 63 aa6.49□□□□□ -1.37
C19orf54-201ENST00000378313 UBR4Q5T4S7 5183 aa6.45□□□□□ -1.38
C19orf54-201ENST00000378313 RNF213Q63HN8 5207 aa6.43□□□□□ -1.38
C19orf54-201ENST00000378313 HMCN2Q8NDA2 5059 aa6.35□□□□□ -1.39
C19orf54-201ENST00000378313 KRTAP19-8Q3LI54 63 aa6.33□□□□□ -1.4
C19orf54-201ENST00000378313 M0R2T5 61 aa6.33□□□□□ -1.4
C19orf54-201ENST00000378313 MT1FP04733 61 aa6.3□□□□□ -1.4
C19orf54-201ENST00000378313 MT2AP02795 61 aa6.3□□□□□ -1.4
C19orf54-201ENST00000378313 MT1HP80294 61 aa6.29□□□□□ -1.4
C19orf54-201ENST00000378313 KRTAP10-10P60014 251 aa6.29□□□□□ -1.4
C19orf54-201ENST00000378313 KRTAP12-3P60328 96 aa6.29□□□□□ -1.4
C19orf54-201ENST00000378313 KRTAP10-5P60370 271 aa6.26□□□□□ -1.41
C19orf54-201ENST00000378313 MT1XP80297 61 aa6.24□□□□□ -1.41
C19orf54-201ENST00000378313 KRTAP10-12P60413 245 aa6.23□□□□□ -1.41
C19orf54-201ENST00000378313 FAT4Q6V0I7 4981 aa6.23□□□□□ -1.41
C19orf54-201ENST00000378313 KRTAP9-8Q9BYQ0 159 aa6.22□□□□□ -1.41
C19orf54-201ENST00000378313 MT1BP07438 61 aa6.2□□□□□ -1.42
C19orf54-201ENST00000378313 KRTAP10-7P60409 375 aaPredicted RBP6.07□□□□□ -1.44
C19orf54-201ENST00000378313 LCE3CQ5T5A8 94 aa5.95□□□□□ -1.46
C19orf54-201ENST00000378313 KRTAP9-3Q9BYQ3 159 aa5.95□□□□□ -1.46
C19orf54-201ENST00000378313 KRTAP19-5Q3LI72 72 aa5.89□□□□□ -1.47
C19orf54-201ENST00000378313 KRTAP9-6A8MVA2 160 aa5.73□□□□□ -1.49
C19orf54-201ENST00000378313 KRTAP2-3P0C7H8 128 aa5.72□□□□□ -1.49
C19orf54-201ENST00000378313 KRTAP2-4Q9BYR9 128 aa5.72□□□□□ -1.49
C19orf54-201ENST00000378313 KRTAP2-1Q9BYU5 128 aa5.72□□□□□ -1.49
C19orf54-201ENST00000378313 KRTAP19-4Q3LI73 84 aa5.64□□□□□ -1.51
C19orf54-201ENST00000378313 LCE2BO14633 110 aa5.62□□□□□ -1.51
C19orf54-201ENST00000378313 FSIP2Q5CZC0 6907 aa5.62□□□□□ -1.51
C19orf54-201ENST00000378313 KRTAP4-8A0A0G2JLE6 195 aa5.58□□□□□ -1.52
C19orf54-201ENST00000378313 KRTAP4-8Q9BYQ9 185 aa5.58□□□□□ -1.52
C19orf54-201ENST00000378313 KRTAP19-7Q3SYF9 63 aa5.55□□□□□ -1.52
C19orf54-201ENST00000378313 USH2AO75445 5202 aa5.5□□□□□ -1.53
C19orf54-201ENST00000378313 KRTAP4-7Q9BYR0 210 aa5.49□□□□□ -1.53
C19orf54-201ENST00000378313 KMT2DO14686 5537 aa5.48□□□□□ -1.53
C19orf54-201ENST00000378313 MT1LQ93083 61 aa5.43□□□□□ -1.54
C19orf54-201ENST00000378313 MT1EP04732 61 aa5.38□□□□□ -1.55
C19orf54-201ENST00000378313 LCE2AQ5TA79 106 aaPredicted RBP5.35□□□□□ -1.55
C19orf54-201ENST00000378313 SSPOA2VEC9 5147 aa5.11□□□□□ -1.59
C19orf54-201ENST00000378313 LOC100996750A0A140TA64 210 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms