RNA–Protein interactions for RNA: ENST00000378302.6

RCBTB1-202, Transcript of RCC1 and BTB domain containing protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RCBTB1, Length 4,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCBTB1-202ENST00000378302 KRTAP12-1P59990 96 aa4.91□□□□□ -1.62
RCBTB1-202ENST00000378302 KRTAP3-3Q9BYR6 98 aa4.91□□□□□ -1.62
RCBTB1-202ENST00000378302 FAT3Q8TDW7 4589 aa4.89□□□□□ -1.63
RCBTB1-202ENST00000378302 Q5VSD8 79 aa4.89□□□□□ -1.63
RCBTB1-202ENST00000378302 PLAC4Q8WY50 150 aa4.89□□□□□ -1.63
RCBTB1-202ENST00000378302 J3QL48 77 aa4.88□□□□□ -1.63
RCBTB1-202ENST00000378302 M0QZ58 72 aa4.88□□□□□ -1.63
RCBTB1-202ENST00000378302 KRTAP10-8P60410 259 aa4.87□□□□□ -1.63
RCBTB1-202ENST00000378302 HYDINQ4G0P3 5121 aa4.87□□□□□ -1.63
RCBTB1-202ENST00000378302 DNAH5Q8TE73 4624 aa4.85□□□□□ -1.63
RCBTB1-202ENST00000378302 VPS13BQ7Z7G8 4022 aa4.85□□□□□ -1.63
RCBTB1-202ENST00000378302 R4GN34 69 aa4.84□□□□□ -1.63
RCBTB1-202ENST00000378302 KRTAP21-3Q3LHN1 58 aa4.84□□□□□ -1.64
RCBTB1-202ENST00000378302 XP32Q5T750 250 aa4.84□□□□□ -1.64
RCBTB1-202ENST00000378302 PKHD1P08F94 4074 aa4.82□□□□□ -1.64
RCBTB1-202ENST00000378302 DYNC2H1Q8NCM8 4307 aaKnown RBP4.82□□□□□ -1.64
RCBTB1-202ENST00000378302 KIAA1109Q2LD37 5005 aa4.81□□□□□ -1.64
RCBTB1-202ENST00000378302 KMT2CQ8NEZ4 4911 aaKnown RBP4.81□□□□□ -1.64
RCBTB1-202ENST00000378302 LRP1Q07954 4544 aaKnown RBP4.76□□□□□ -1.65
RCBTB1-202ENST00000378302 CAMK2N1Q7Z7J9 78 aa4.75□□□□□ -1.65
RCBTB1-202ENST00000378302 RYR1P21817 5038 aa4.74□□□□□ -1.65
RCBTB1-202ENST00000378302 DYNC1H1Q14204 4646 aaKnown RBP4.69□□□□□ -1.66
RCBTB1-202ENST00000378302 RYR3Q15413 4870 aa4.68□□□□□ -1.66
RCBTB1-202ENST00000378302 FAT2Q9NYQ8 4349 aa4.67□□□□□ -1.66
RCBTB1-202ENST00000378302 SACSQ9NZJ4 4579 aa4.62□□□□□ -1.67
RCBTB1-202ENST00000378302 APOBP04114 4563 aaKnown RBP4.62□□□□□ -1.67
RCBTB1-202ENST00000378302 KRTAP4-5Q9BYR2 181 aa4.61□□□□□ -1.67
RCBTB1-202ENST00000378302 EPPK1P58107 5090 aaKnown RBP4.57□□□□□ -1.68
RCBTB1-202ENST00000378302 PKD1P98161 4303 aa4.56□□□□□ -1.68
RCBTB1-202ENST00000378302 KRTAP10-4P60372 401 aaPredicted RBP4.56□□□□□ -1.68
RCBTB1-202ENST00000378302 PP632Q6XCG6 107 aa4.55□□□□□ -1.68
RCBTB1-202ENST00000378302 A0A1B0GVY2 172 aa4.54□□□□□ -1.68
RCBTB1-202ENST00000378302 LRP2P98164 4655 aa4.54□□□□□ -1.68
RCBTB1-202ENST00000378302 M0R2T5 61 aa4.54□□□□□ -1.68
RCBTB1-202ENST00000378302 HSPG2P98160 4391 aa4.53□□□□□ -1.69
RCBTB1-202ENST00000378302 LORP23490 312 aaPredicted RBP4.51□□□□□ -1.69
RCBTB1-202ENST00000378302 SEC61BP60468 96 aaKnown RBP4.5□□□□□ -1.69
RCBTB1-202ENST00000378302 MUC2Q02817 5179 aa4.46□□□□□ -1.7
RCBTB1-202ENST00000378302 KRTAP17-1Q9BYP8 105 aa4.45□□□□□ -1.7
RCBTB1-202ENST00000378302 TNP1P09430 55 aa4.44□□□□□ -1.7
RCBTB1-202ENST00000378302 PCLOQ9Y6V0 5065 aa4.44□□□□□ -1.7
RCBTB1-202ENST00000378302 RYR2Q92736 4967 aa4.43□□□□□ -1.7
RCBTB1-202ENST00000378302 LPAP08519 4548 aa4.42□□□□□ -1.7
RCBTB1-202ENST00000378302 PKHD1L1Q86WI1 4243 aa4.39□□□□□ -1.71
RCBTB1-202ENST00000378302 HERC2O95714 4834 aa4.39□□□□□ -1.71
RCBTB1-202ENST00000378302 RNF213Q63HN8 5207 aa4.39□□□□□ -1.71
RCBTB1-202ENST00000378302 HERC1Q15751 4861 aa4.33□□□□□ -1.72
RCBTB1-202ENST00000378302 FSIP2Q5CZC0 6907 aa4.33□□□□□ -1.72
RCBTB1-202ENST00000378302 ABCA13Q86UQ4 5058 aa4.32□□□□□ -1.72
RCBTB1-202ENST00000378302 MT1HL1P0DM35 61 aa4.3□□□□□ -1.72
RCBTB1-202ENST00000378302 PRO2289Q9P1D8 64 aa4.26□□□□□ -1.73
RCBTB1-202ENST00000378302 FAT4Q6V0I7 4981 aa4.26□□□□□ -1.73
RCBTB1-202ENST00000378302 TNXBP22105 4242 aa4.23□□□□□ -1.73
RCBTB1-202ENST00000378302 UBR4Q5T4S7 5183 aa4.22□□□□□ -1.73
RCBTB1-202ENST00000378302 KRTAP4-1Q9BYQ7 146 aa4.13□□□□□ -1.75
RCBTB1-202ENST00000378302 SPRR5A0A1B0GTR4 108 aa4.13□□□□□ -1.75
RCBTB1-202ENST00000378302 INE1O15225 51 aa4.12□□□□□ -1.75
RCBTB1-202ENST00000378302 LCE3AQ5TA76 89 aa4.09□□□□□ -1.75
RCBTB1-202ENST00000378302 KRTAP10-10P60014 251 aa4.07□□□□□ -1.76
RCBTB1-202ENST00000378302 KRTAP23-1A1A580 65 aa4.07□□□□□ -1.76
RCBTB1-202ENST00000378302 HMCN2Q8NDA2 5059 aa4□□□□□ -1.77
RCBTB1-202ENST00000378302 OBSCNQ5VST9 7968 aa3.98□□□□□ -1.77
RCBTB1-202ENST00000378302 BIRC6Q9NR09 4857 aa3.97□□□□□ -1.77
RCBTB1-202ENST00000378302 USH2AO75445 5202 aa3.92□□□□□ -1.78
RCBTB1-202ENST00000378302 MUC17Q685J3 4493 aa3.9□□□□□ -1.78
RCBTB1-202ENST00000378302 KRTAP12-3P60328 96 aa3.88□□□□□ -1.79
RCBTB1-202ENST00000378302 KRTAP19-2Q3LHN2 52 aa3.85□□□□□ -1.79
RCBTB1-202ENST00000378302 KRTAP10-12P60413 245 aa3.82□□□□□ -1.8
RCBTB1-202ENST00000378302 LCE2DQ5TA82 110 aaPredicted RBP3.81□□□□□ -1.8
RCBTB1-202ENST00000378302 KRTAP8-1Q8IUC2 63 aa3.8□□□□□ -1.8
RCBTB1-202ENST00000378302 KRTAP19-1Q8IUB9 90 aa3.79□□□□□ -1.8
RCBTB1-202ENST00000378302 SPRR2GQ9BYE4 73 aa3.79□□□□□ -1.8
RCBTB1-202ENST00000378302 FLGP20930 4061 aaPredicted RBP3.76□□□□□ -1.81
RCBTB1-202ENST00000378302 KMT2DO14686 5537 aa3.73□□□□□ -1.81
RCBTB1-202ENST00000378302 DSTQ03001 7570 aaKnown RBP3.71□□□□□ -1.82
RCBTB1-202ENST00000378302 MT1HP80294 61 aa3.67□□□□□ -1.82
RCBTB1-202ENST00000378302 MT1FP04733 61 aa3.67□□□□□ -1.82
RCBTB1-202ENST00000378302 SYNE1Q8NF91 8797 aaKnown RBP3.67□□□□□ -1.82
RCBTB1-202ENST00000378302 KRTAP10-7P60409 375 aaPredicted RBP3.65□□□□□ -1.83
RCBTB1-202ENST00000378302 MT2AP02795 61 aa3.63□□□□□ -1.83
RCBTB1-202ENST00000378302 KRTAP10-5P60370 271 aa3.62□□□□□ -1.83
RCBTB1-202ENST00000378302 MT1XP80297 61 aa3.62□□□□□ -1.83
RCBTB1-202ENST00000378302 LCE3CQ5T5A8 94 aa3.59□□□□□ -1.83
RCBTB1-202ENST00000378302 KRTAP19-5Q3LI72 72 aa3.59□□□□□ -1.84
RCBTB1-202ENST00000378302 LCE2CQ5TA81 110 aa3.58□□□□□ -1.84
RCBTB1-202ENST00000378302 CRCT1Q9UGL9 99 aa3.57□□□□□ -1.84
RCBTB1-202ENST00000378302 FCGBPQ9Y6R7 5405 aaPredicted RBP3.56□□□□□ -1.84
RCBTB1-202ENST00000378302 MT1BP07438 61 aa3.54□□□□□ -1.84
RCBTB1-202ENST00000378302 KRTAP19-8Q3LI54 63 aa3.51□□□□□ -1.85
RCBTB1-202ENST00000378302 KRTAP9-8Q9BYQ0 159 aa3.47□□□□□ -1.85
RCBTB1-202ENST00000378302 KRTAP4-7Q9BYR0 210 aa3.46□□□□□ -1.86
RCBTB1-202ENST00000378302 KRTAP9-6A8MVA2 160 aa3.44□□□□□ -1.86
RCBTB1-202ENST00000378302 KRTAP4-8A0A0G2JLE6 195 aa3.43□□□□□ -1.86
RCBTB1-202ENST00000378302 KRTAP4-8Q9BYQ9 185 aa3.43□□□□□ -1.86
RCBTB1-202ENST00000378302 SSPOA2VEC9 5147 aa3.41□□□□□ -1.86
RCBTB1-202ENST00000378302 SYNE2Q8WXH0 6885 aaKnown RBP3.4□□□□□ -1.87
RCBTB1-202ENST00000378302 MUC12Q9UKN1 5478 aa3.39□□□□□ -1.87
RCBTB1-202ENST00000378302 LOC100996750A0A140TA64 210 aa3.39□□□□□ -1.87
RCBTB1-202ENST00000378302 KRTAP4-6Q9BYQ5 205 aa3.39□□□□□ -1.87
RCBTB1-202ENST00000378302 KRTAP2-3P0C7H8 128 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms