RNA–Protein interactions for RNA: ENST00000377833.8

CUBN-202, Transcript of cubilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUBN, Length 11,949 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-202ENST00000377833 DNAH7Q8WXX0 4024 aa2.41□□□□□ -2.02
CUBN-202ENST00000377833 LYSTQ99698 3801 aa2.4□□□□□ -2.03
CUBN-202ENST00000377833 KRTAP10-7P60409 375 aaPredicted RBP2.39□□□□□ -2.03
CUBN-202ENST00000377833 HECTD4Q9Y4D8 3996 aa2.39□□□□□ -2.03
CUBN-202ENST00000377833 ZNF469Q96JG9 3925 aaPredicted RBP2.38□□□□□ -2.03
CUBN-202ENST00000377833 ANK3Q12955 4377 aaKnown RBP2.38□□□□□ -2.03
CUBN-202ENST00000377833 LORP23490 312 aaPredicted RBP2.37□□□□□ -2.03
CUBN-202ENST00000377833 CSMD2Q7Z408 3487 aa2.36□□□□□ -2.03
CUBN-202ENST00000377833 CSMD3Q7Z407 3707 aa2.34□□□□□ -2.03
CUBN-202ENST00000377833 LCE3CQ5T5A8 94 aa2.34□□□□□ -2.03
CUBN-202ENST00000377833 MT1HP80294 61 aa2.33□□□□□ -2.04
CUBN-202ENST00000377833 DNAH3Q8TD57 4116 aa2.32□□□□□ -2.04
CUBN-202ENST00000377833 CMYA5Q8N3K9 4069 aa2.32□□□□□ -2.04
CUBN-202ENST00000377833 MT2AP02795 61 aa2.3□□□□□ -2.04
CUBN-202ENST00000377833 KRTAP19-8Q3LI54 63 aa2.29□□□□□ -2.04
CUBN-202ENST00000377833 VPS13BQ7Z7G8 4022 aa2.29□□□□□ -2.04
CUBN-202ENST00000377833 KRTAP10-5P60370 271 aa2.27□□□□□ -2.05
CUBN-202ENST00000377833 HUWE1Q7Z6Z7 4374 aaKnown RBP2.27□□□□□ -2.05
CUBN-202ENST00000377833 KRTAP4-5Q9BYR2 181 aa2.26□□□□□ -2.05
CUBN-202ENST00000377833 KMT2AQ03164 3969 aa2.26□□□□□ -2.05
CUBN-202ENST00000377833 DNAH6Q9C0G6 4158 aa2.26□□□□□ -2.05
CUBN-202ENST00000377833 CRCT1Q9UGL9 99 aa2.23□□□□□ -2.05
CUBN-202ENST00000377833 RYR1P21817 5038 aa2.23□□□□□ -2.05
CUBN-202ENST00000377833 SPRR2FQ96RM1 72 aa2.22□□□□□ -2.05
CUBN-202ENST00000377833 SPRR5A0A1B0GTR4 108 aa2.21□□□□□ -2.06
CUBN-202ENST00000377833 KRTAP12-4P60329 112 aa2.2□□□□□ -2.06
CUBN-202ENST00000377833 FLGP20930 4061 aaPredicted RBP2.2□□□□□ -2.06
CUBN-202ENST00000377833 KRTAP19-5Q3LI72 72 aa2.19□□□□□ -2.06
CUBN-202ENST00000377833 MT1GP13640 62 aa2.18□□□□□ -2.06
CUBN-202ENST00000377833 DNAH1Q9P2D7 4330 aa2.18□□□□□ -2.06
CUBN-202ENST00000377833 MT1FP04733 61 aa2.18□□□□□ -2.06
CUBN-202ENST00000377833 DNAH2Q9P225 4427 aa2.17□□□□□ -2.06
CUBN-202ENST00000377833 FRAS1Q86XX4 4008 aa2.16□□□□□ -2.06
CUBN-202ENST00000377833 DNAH9Q9NYC9 4486 aa2.14□□□□□ -2.07
CUBN-202ENST00000377833 MT3P25713 68 aa2.13□□□□□ -2.07
CUBN-202ENST00000377833 PCLOQ9Y6V0 5065 aa2.13□□□□□ -2.07
CUBN-202ENST00000377833 KRTAP4-1Q9BYQ7 146 aa2.12□□□□□ -2.07
CUBN-202ENST00000377833 LCE2BO14633 110 aa2.11□□□□□ -2.07
CUBN-202ENST00000377833 KRTAP19-1Q8IUB9 90 aa2.11□□□□□ -2.07
CUBN-202ENST00000377833 KIAA1109Q2LD37 5005 aa2.11□□□□□ -2.07
CUBN-202ENST00000377833 DYNC2H1Q8NCM8 4307 aaKnown RBP2.11□□□□□ -2.07
CUBN-202ENST00000377833 HYDINQ4G0P3 5121 aa2.1□□□□□ -2.07
CUBN-202ENST00000377833 MT1XP80297 61 aa2.1□□□□□ -2.07
CUBN-202ENST00000377833 RNF213Q63HN8 5207 aa2.1□□□□□ -2.07
CUBN-202ENST00000377833 UBR4Q5T4S7 5183 aa2.08□□□□□ -2.08
CUBN-202ENST00000377833 ABCA13Q86UQ4 5058 aa2.08□□□□□ -2.08
CUBN-202ENST00000377833 PRKDCP78527 4128 aaKnown RBP2.08□□□□□ -2.08
CUBN-202ENST00000377833 RYR2Q92736 4967 aa2.08□□□□□ -2.08
CUBN-202ENST00000377833 MT1LQ93083 61 aa2.07□□□□□ -2.08
CUBN-202ENST00000377833 SPRR2DP22532 72 aa2.06□□□□□ -2.08
CUBN-202ENST00000377833 SPRR2EP22531 72 aa2.05□□□□□ -2.08
CUBN-202ENST00000377833 SPRR2BP35325 72 aa2.05□□□□□ -2.08
CUBN-202ENST00000377833 SPRR2AP35326 72 aa2.05□□□□□ -2.08
CUBN-202ENST00000377833 VPS13DQ5THJ4 4388 aa2.04□□□□□ -2.08
CUBN-202ENST00000377833 FAT2Q9NYQ8 4349 aa2.04□□□□□ -2.08
CUBN-202ENST00000377833 KRTAP19-3Q7Z4W3 81 aa2.03□□□□□ -2.08
CUBN-202ENST00000377833 LCE3DQ9BYE3 92 aa2.03□□□□□ -2.08
CUBN-202ENST00000377833 DNAH10Q8IVF4 4471 aa2.03□□□□□ -2.08
CUBN-202ENST00000377833 LCE3EQ5T5B0 92 aa2.03□□□□□ -2.09
CUBN-202ENST00000377833 MT1EP04732 61 aa2.02□□□□□ -2.09
CUBN-202ENST00000377833 LCE2CQ5TA81 110 aa2.02□□□□□ -2.09
CUBN-202ENST00000377833 PKHD1P08F94 4074 aa2.01□□□□□ -2.09
CUBN-202ENST00000377833 PLECQ15149 4684 aaKnown RBP2.01□□□□□ -2.09
CUBN-202ENST00000377833 KRTAP9-3Q9BYQ3 159 aa2□□□□□ -2.09
CUBN-202ENST00000377833 KRTAP9-8Q9BYQ0 159 aa2□□□□□ -2.09
CUBN-202ENST00000377833 MT1BP07438 61 aa1.99□□□□□ -2.09
CUBN-202ENST00000377833 STARD9Q9P2P6 4700 aa1.99□□□□□ -2.09
CUBN-202ENST00000377833 DNAH8Q96JB1 4490 aa1.99□□□□□ -2.09
CUBN-202ENST00000377833 DNAH17Q9UFH2 4485 aa1.98□□□□□ -2.09
CUBN-202ENST00000377833 EPPK1P58107 5090 aaKnown RBP1.98□□□□□ -2.09
CUBN-202ENST00000377833 KRTAP19-6Q3LI70 58 aa1.97□□□□□ -2.09
CUBN-202ENST00000377833 DNAH11Q96DT5 4516 aa1.97□□□□□ -2.09
CUBN-202ENST00000377833 HSPG2P98160 4391 aa1.96□□□□□ -2.1
CUBN-202ENST00000377833 DNHD1Q96M86 4753 aa1.96□□□□□ -2.1
CUBN-202ENST00000377833 LCE3BQ5TA77 95 aa1.96□□□□□ -2.1
CUBN-202ENST00000377833 DNAH5Q8TE73 4624 aa1.95□□□□□ -2.1
CUBN-202ENST00000377833 PKHD1L1Q86WI1 4243 aa1.94□□□□□ -2.1
CUBN-202ENST00000377833 DYNC1H1Q14204 4646 aaKnown RBP1.94□□□□□ -2.1
CUBN-202ENST00000377833 HERC1Q15751 4861 aa1.93□□□□□ -2.1
CUBN-202ENST00000377833 MT1MQ8N339 61 aa1.93□□□□□ -2.1
CUBN-202ENST00000377833 LRP1Q07954 4544 aaKnown RBP1.92□□□□□ -2.1
CUBN-202ENST00000377833 LCE2DQ5TA82 110 aaPredicted RBP1.91□□□□□ -2.1
CUBN-202ENST00000377833 LCE1AQ5T7P2 110 aa1.9□□□□□ -2.1
CUBN-202ENST00000377833 KMT2CQ8NEZ4 4911 aaKnown RBP1.9□□□□□ -2.11
CUBN-202ENST00000377833 LRP1BQ9NZR2 4599 aa1.89□□□□□ -2.11
CUBN-202ENST00000377833 KRTAP17-1Q9BYP8 105 aa1.89□□□□□ -2.11
CUBN-202ENST00000377833 MT1AP04731 61 aa1.88□□□□□ -2.11
CUBN-202ENST00000377833 MUC2Q02817 5179 aa1.87□□□□□ -2.11
CUBN-202ENST00000377833 RYR3Q15413 4870 aa1.87□□□□□ -2.11
CUBN-202ENST00000377833 BIRC6Q9NR09 4857 aa1.87□□□□□ -2.11
CUBN-202ENST00000377833 HMCN2Q8NDA2 5059 aa1.85□□□□□ -2.11
CUBN-202ENST00000377833 KRTAP19-2Q3LHN2 52 aa1.85□□□□□ -2.11
CUBN-202ENST00000377833 SACSQ9NZJ4 4579 aa1.85□□□□□ -2.11
CUBN-202ENST00000377833 USH2AO75445 5202 aa1.84□□□□□ -2.11
CUBN-202ENST00000377833 TNXBP22105 4242 aa1.83□□□□□ -2.12
CUBN-202ENST00000377833 KRTAP2-3P0C7H8 128 aa1.83□□□□□ -2.12
CUBN-202ENST00000377833 KRTAP2-4Q9BYR9 128 aa1.83□□□□□ -2.12
CUBN-202ENST00000377833 KRTAP2-1Q9BYU5 128 aa1.83□□□□□ -2.12
CUBN-202ENST00000377833 PKD1P98161 4303 aa1.83□□□□□ -2.12
CUBN-202ENST00000377833 APOBP04114 4563 aaKnown RBP1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms