RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 RPS29P62273 56 aaKnown RBP8.32□□□□□ -1.08
FXN-201ENST00000377270 RYR2Q92736 4967 aa8.31□□□□□ -1.08
FXN-201ENST00000377270 KRTAP10-4P60372 401 aaPredicted RBP8.3□□□□□ -1.08
FXN-201ENST00000377270 KMT2CQ8NEZ4 4911 aaKnown RBP8.26□□□□□ -1.09
FXN-201ENST00000377270 COX6B2Q6YFQ2 88 aa8.25□□□□□ -1.09
FXN-201ENST00000377270 PKHD1L1Q86WI1 4243 aa8.23□□□□□ -1.09
FXN-201ENST00000377270 C9orf92A6NGG3 77 aa8.21□□□□□ -1.09
FXN-201ENST00000377270 RPL37P61927 97 aaKnown RBP8.21□□□□□ -1.09
FXN-201ENST00000377270 KRTAP3-1Q9BYR8 98 aa8.12□□□□□ -1.11
FXN-201ENST00000377270 A0A0D9SG42 100 aa8.09□□□□□ -1.11
FXN-201ENST00000377270 DMBT1Q9UGM3 2413 aaPredicted RBP8.07□□□□□ -1.12
FXN-201ENST00000377270 LRP1Q07954 4544 aaKnown RBP8.05□□□□□ -1.12
FXN-201ENST00000377270 Q5VSD8 79 aa8.02□□□□□ -1.12
FXN-201ENST00000377270 J3QL48 77 aa8.02□□□□□ -1.13
FXN-201ENST00000377270 HSPG2P98160 4391 aa8.02□□□□□ -1.13
FXN-201ENST00000377270 RYR3Q15413 4870 aa8.01□□□□□ -1.13
FXN-201ENST00000377270 TNXBP22105 4242 aa8□□□□□ -1.13
FXN-201ENST00000377270 KRTAP10-8P60410 259 aa8□□□□□ -1.13
FXN-201ENST00000377270 FAT3Q8TDW7 4589 aa8□□□□□ -1.13
FXN-201ENST00000377270 KRTAP13-4Q3LI77 160 aa7.99□□□□□ -1.13
FXN-201ENST00000377270 RYR1P21817 5038 aa7.94□□□□□ -1.14
FXN-201ENST00000377270 S4R3F8 94 aa7.9□□□□□ -1.14
FXN-201ENST00000377270 KRTAP17-1Q9BYP8 105 aa7.9□□□□□ -1.15
FXN-201ENST00000377270 PLAC4Q8WY50 150 aa7.88□□□□□ -1.15
FXN-201ENST00000377270 XP32Q5T750 250 aa7.87□□□□□ -1.15
FXN-201ENST00000377270 KRTAP3-2Q9BYR7 98 aa7.87□□□□□ -1.15
FXN-201ENST00000377270 KRTAP10-6P60371 365 aaPredicted RBP7.87□□□□□ -1.15
FXN-201ENST00000377270 KIAA1109Q2LD37 5005 aa7.85□□□□□ -1.15
FXN-201ENST00000377270 CAMK2N1Q7Z7J9 78 aa7.84□□□□□ -1.15
FXN-201ENST00000377270 MYCBP2O75592 4640 aa7.83□□□□□ -1.16
FXN-201ENST00000377270 KRTAP12-2P59991 146 aa7.82□□□□□ -1.16
FXN-201ENST00000377270 MT1HL1P0DM35 61 aa7.77□□□□□ -1.17
FXN-201ENST00000377270 KRTAP3-3Q9BYR6 98 aa7.73□□□□□ -1.17
FXN-201ENST00000377270 EPPK1P58107 5090 aaKnown RBP7.72□□□□□ -1.17
FXN-201ENST00000377270 KRTAP12-1P59990 96 aa7.65□□□□□ -1.18
FXN-201ENST00000377270 LRP2P98164 4655 aa7.56□□□□□ -1.2
FXN-201ENST00000377270 LCE2DQ5TA82 110 aaPredicted RBP7.56□□□□□ -1.2
FXN-201ENST00000377270 PRO2289Q9P1D8 64 aa7.56□□□□□ -1.2
FXN-201ENST00000377270 LPAP08519 4548 aa7.55□□□□□ -1.2
FXN-201ENST00000377270 KRTAP4-5Q9BYR2 181 aa7.55□□□□□ -1.2
FXN-201ENST00000377270 ABCA13Q86UQ4 5058 aa7.52□□□□□ -1.21
FXN-201ENST00000377270 M0QZ58 72 aa7.38□□□□□ -1.23
FXN-201ENST00000377270 R4GN34 69 aa7.35□□□□□ -1.23
FXN-201ENST00000377270 HERC2O95714 4834 aa7.3□□□□□ -1.24
FXN-201ENST00000377270 MUC17Q685J3 4493 aa7.22□□□□□ -1.25
FXN-201ENST00000377270 KRTAP4-1Q9BYQ7 146 aa7.19□□□□□ -1.26
FXN-201ENST00000377270 BIRC6Q9NR09 4857 aa7.14□□□□□ -1.27
FXN-201ENST00000377270 INE1O15225 51 aa7.14□□□□□ -1.27
FXN-201ENST00000377270 PP632Q6XCG6 107 aa7.12□□□□□ -1.27
FXN-201ENST00000377270 SPRR5A0A1B0GTR4 108 aa7.09□□□□□ -1.27
FXN-201ENST00000377270 KRTAP19-2Q3LHN2 52 aa7.02□□□□□ -1.29
FXN-201ENST00000377270 MUC2Q02817 5179 aa7.01□□□□□ -1.29
FXN-201ENST00000377270 LORP23490 312 aaPredicted RBP6.97□□□□□ -1.29
FXN-201ENST00000377270 HERC1Q15751 4861 aa6.96□□□□□ -1.29
FXN-201ENST00000377270 PCLOQ9Y6V0 5065 aa6.94□□□□□ -1.3
FXN-201ENST00000377270 HMCN2Q8NDA2 5059 aa6.88□□□□□ -1.31
FXN-201ENST00000377270 FLGP20930 4061 aaPredicted RBP6.87□□□□□ -1.31
FXN-201ENST00000377270 FAT4Q6V0I7 4981 aa6.69□□□□□ -1.34
FXN-201ENST00000377270 LCE2CQ5TA81 110 aa6.68□□□□□ -1.34
FXN-201ENST00000377270 KRTAP23-1A1A580 65 aa6.64□□□□□ -1.35
FXN-201ENST00000377270 TNP1P09430 55 aa6.61□□□□□ -1.35
FXN-201ENST00000377270 UBR4Q5T4S7 5183 aa6.6□□□□□ -1.35
FXN-201ENST00000377270 RNF213Q63HN8 5207 aa6.59□□□□□ -1.35
FXN-201ENST00000377270 M0R2T5 61 aa6.57□□□□□ -1.36
FXN-201ENST00000377270 MT1HP80294 61 aa6.51□□□□□ -1.37
FXN-201ENST00000377270 LCE2BO14633 110 aa6.49□□□□□ -1.37
FXN-201ENST00000377270 SPRR2GQ9BYE4 73 aa6.45□□□□□ -1.38
FXN-201ENST00000377270 KRTAP19-1Q8IUB9 90 aa6.43□□□□□ -1.38
FXN-201ENST00000377270 KRTAP10-10P60014 251 aa6.39□□□□□ -1.39
FXN-201ENST00000377270 MT2AP02795 61 aa6.37□□□□□ -1.39
FXN-201ENST00000377270 MT1FP04733 61 aa6.37□□□□□ -1.39
FXN-201ENST00000377270 KRTAP9-8Q9BYQ0 159 aa6.34□□□□□ -1.39
FXN-201ENST00000377270 LCE2AQ5TA79 106 aaPredicted RBP6.3□□□□□ -1.4
FXN-201ENST00000377270 KRTAP19-8Q3LI54 63 aa6.18□□□□□ -1.42
FXN-201ENST00000377270 LCE3AQ5TA76 89 aa6.18□□□□□ -1.42
FXN-201ENST00000377270 MT1BP07438 61 aa6.12□□□□□ -1.43
FXN-201ENST00000377270 KRTAP9-3Q9BYQ3 159 aa6.08□□□□□ -1.44
FXN-201ENST00000377270 KRTAP10-5P60370 271 aa6.05□□□□□ -1.44
FXN-201ENST00000377270 MT1XP80297 61 aa6.04□□□□□ -1.44
FXN-201ENST00000377270 KRTAP8-1Q8IUC2 63 aa6.03□□□□□ -1.44
FXN-201ENST00000377270 KRTAP10-12P60413 245 aa5.92□□□□□ -1.46
FXN-201ENST00000377270 KRTAP10-7P60409 375 aaPredicted RBP5.87□□□□□ -1.47
FXN-201ENST00000377270 KRTAP12-3P60328 96 aa5.86□□□□□ -1.47
FXN-201ENST00000377270 USH2AO75445 5202 aa5.79□□□□□ -1.48
FXN-201ENST00000377270 KMT2DO14686 5537 aa5.62□□□□□ -1.51
FXN-201ENST00000377270 KRTAP19-5Q3LI72 72 aa5.6□□□□□ -1.51
FXN-201ENST00000377270 LCE3CQ5T5A8 94 aa5.56□□□□□ -1.52
FXN-201ENST00000377270 KRTAP4-8A0A0G2JLE6 195 aa5.55□□□□□ -1.52
FXN-201ENST00000377270 KRTAP4-8Q9BYQ9 185 aa5.55□□□□□ -1.52
FXN-201ENST00000377270 KRTAP2-3P0C7H8 128 aa5.53□□□□□ -1.52
FXN-201ENST00000377270 KRTAP2-4Q9BYR9 128 aa5.53□□□□□ -1.52
FXN-201ENST00000377270 KRTAP2-1Q9BYU5 128 aa5.53□□□□□ -1.52
FXN-201ENST00000377270 SSPOA2VEC9 5147 aa5.43□□□□□ -1.54
FXN-201ENST00000377270 KRTAP9-6A8MVA2 160 aa5.4□□□□□ -1.54
FXN-201ENST00000377270 KRTAP9-6A0A140TA67 174 aa5.38□□□□□ -1.55
FXN-201ENST00000377270 KRTAP19-7Q3SYF9 63 aa5.38□□□□□ -1.55
FXN-201ENST00000377270 FSIP2Q5CZC0 6907 aa5.35□□□□□ -1.55
FXN-201ENST00000377270 KRTAP19-6Q3LI70 58 aa5.3□□□□□ -1.56
FXN-201ENST00000377270 KRTAP4-7Q9BYR0 210 aa5.24□□□□□ -1.57
FXN-201ENST00000377270 MT1EP04732 61 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms