RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 XP32Q5T750 250 aa6.7□□□□□ -1.34
USP11-204ENST00000377107 RPL37P61927 97 aaKnown RBP6.68□□□□□ -1.34
USP11-204ENST00000377107 S4R3F8 94 aa6.68□□□□□ -1.34
USP11-204ENST00000377107 RYR2Q92736 4967 aa6.67□□□□□ -1.34
USP11-204ENST00000377107 FAT3Q8TDW7 4589 aa6.66□□□□□ -1.34
USP11-204ENST00000377107 KIAA1109Q2LD37 5005 aa6.64□□□□□ -1.35
USP11-204ENST00000377107 PKHD1L1Q86WI1 4243 aa6.62□□□□□ -1.35
USP11-204ENST00000377107 KRTAP17-1Q9BYP8 105 aa6.6□□□□□ -1.35
USP11-204ENST00000377107 HSPG2P98160 4391 aa6.6□□□□□ -1.35
USP11-204ENST00000377107 SPINT4Q6UDR6 99 aa6.59□□□□□ -1.35
USP11-204ENST00000377107 P0C880 135 aa6.59□□□□□ -1.36
USP11-204ENST00000377107 KRTAP13-4Q3LI77 160 aa6.56□□□□□ -1.36
USP11-204ENST00000377107 RYR3Q15413 4870 aa6.56□□□□□ -1.36
USP11-204ENST00000377107 KRTAP3-3Q9BYR6 98 aa6.55□□□□□ -1.36
USP11-204ENST00000377107 KRTAP10-6P60371 365 aaPredicted RBP6.53□□□□□ -1.36
USP11-204ENST00000377107 KRTAP25-1Q3LHN0 102 aa6.53□□□□□ -1.36
USP11-204ENST00000377107 RYR1P21817 5038 aa6.52□□□□□ -1.37
USP11-204ENST00000377107 MT1HL1P0DM35 61 aa6.5□□□□□ -1.37
USP11-204ENST00000377107 ROMO1P60602 79 aa6.48□□□□□ -1.37
USP11-204ENST00000377107 LRP2P98164 4655 aa6.47□□□□□ -1.37
USP11-204ENST00000377107 TNXBP22105 4242 aa6.47□□□□□ -1.37
USP11-204ENST00000377107 KRTAP3-2Q9BYR7 98 aa6.45□□□□□ -1.38
USP11-204ENST00000377107 C10orf95Q9H7T3 257 aa6.45□□□□□ -1.38
USP11-204ENST00000377107 LPAP08519 4548 aa6.43□□□□□ -1.38
USP11-204ENST00000377107 KRTAP4-5Q9BYR2 181 aa6.42□□□□□ -1.38
USP11-204ENST00000377107 J3QL48 77 aa6.41□□□□□ -1.38
USP11-204ENST00000377107 KRTAP12-2P59991 146 aa6.38□□□□□ -1.39
USP11-204ENST00000377107 M0QZ58 72 aa6.35□□□□□ -1.39
USP11-204ENST00000377107 EPPK1P58107 5090 aaKnown RBP6.33□□□□□ -1.4
USP11-204ENST00000377107 TPRXLQ17RH7 258 aa6.33□□□□□ -1.4
USP11-204ENST00000377107 R4GN34 69 aa6.32□□□□□ -1.4
USP11-204ENST00000377107 ABCA13Q86UQ4 5058 aa6.29□□□□□ -1.4
USP11-204ENST00000377107 H3BS24 57 aa6.27□□□□□ -1.41
USP11-204ENST00000377107 KRTAP12-1P59990 96 aa6.26□□□□□ -1.41
USP11-204ENST00000377107 SEC61BP60468 96 aaKnown RBP6.24□□□□□ -1.41
USP11-204ENST00000377107 LORP23490 312 aaPredicted RBP6.14□□□□□ -1.43
USP11-204ENST00000377107 KRTAP4-1Q9BYQ7 146 aa6.12□□□□□ -1.43
USP11-204ENST00000377107 MUC2Q02817 5179 aa6.11□□□□□ -1.43
USP11-204ENST00000377107 CAMK2N1Q7Z7J9 78 aa6.09□□□□□ -1.43
USP11-204ENST00000377107 HERC2O95714 4834 aa6.05□□□□□ -1.44
USP11-204ENST00000377107 NDUFAF8A1L188 74 aa6.02□□□□□ -1.45
USP11-204ENST00000377107 M0R2T5 61 aa5.91□□□□□ -1.46
USP11-204ENST00000377107 MUC17Q685J3 4493 aa5.85□□□□□ -1.47
USP11-204ENST00000377107 KRTAP15-1Q3LI76 137 aa5.85□□□□□ -1.47
USP11-204ENST00000377107 HERC1Q15751 4861 aa5.85□□□□□ -1.47
USP11-204ENST00000377107 FAT4Q6V0I7 4981 aa5.8□□□□□ -1.48
USP11-204ENST00000377107 PLAC4Q8WY50 150 aa5.79□□□□□ -1.48
USP11-204ENST00000377107 KRTAP19-2Q3LHN2 52 aa5.75□□□□□ -1.49
USP11-204ENST00000377107 RNF213Q63HN8 5207 aa5.73□□□□□ -1.49
USP11-204ENST00000377107 TNP1P09430 55 aa5.68□□□□□ -1.5
USP11-204ENST00000377107 PCLOQ9Y6V0 5065 aa5.68□□□□□ -1.5
USP11-204ENST00000377107 LUZP6Q538Z0 58 aa5.65□□□□□ -1.5
USP11-204ENST00000377107 BIRC6Q9NR09 4857 aa5.65□□□□□ -1.51
USP11-204ENST00000377107 FLGP20930 4061 aaPredicted RBP5.63□□□□□ -1.51
USP11-204ENST00000377107 KRTAP10-10P60014 251 aa5.62□□□□□ -1.51
USP11-204ENST00000377107 PP632Q6XCG6 107 aa5.6□□□□□ -1.51
USP11-204ENST00000377107 UBR4Q5T4S7 5183 aa5.58□□□□□ -1.52
USP11-204ENST00000377107 HMCN2Q8NDA2 5059 aa5.54□□□□□ -1.52
USP11-204ENST00000377107 LCE2CQ5TA81 110 aa5.51□□□□□ -1.53
USP11-204ENST00000377107 MT1HP80294 61 aa5.46□□□□□ -1.54
USP11-204ENST00000377107 KRTAP19-1Q8IUB9 90 aa5.44□□□□□ -1.54
USP11-204ENST00000377107 MT1FP04733 61 aa5.41□□□□□ -1.54
USP11-204ENST00000377107 MT2AP02795 61 aa5.39□□□□□ -1.55
USP11-204ENST00000377107 SPRR2GQ9BYE4 73 aa5.38□□□□□ -1.55
USP11-204ENST00000377107 LCE3AQ5TA76 89 aa5.37□□□□□ -1.55
USP11-204ENST00000377107 A0A0A0MQY5 61 aa5.29□□□□□ -1.56
USP11-204ENST00000377107 KRTAP9-8Q9BYQ0 159 aa5.27□□□□□ -1.57
USP11-204ENST00000377107 KRTAP23-1A1A580 65 aa5.18□□□□□ -1.58
USP11-204ENST00000377107 MT1BP07438 61 aa5.15□□□□□ -1.58
USP11-204ENST00000377107 USH2AO75445 5202 aa5.14□□□□□ -1.59
USP11-204ENST00000377107 KRTAP10-12P60413 245 aa5.14□□□□□ -1.59
USP11-204ENST00000377107 KRTAP10-5P60370 271 aa5.13□□□□□ -1.59
USP11-204ENST00000377107 MT1XP80297 61 aa5.13□□□□□ -1.59
USP11-204ENST00000377107 KRTAP10-7P60409 375 aaPredicted RBP5.1□□□□□ -1.59
USP11-204ENST00000377107 KRTAP12-3P60328 96 aa5.1□□□□□ -1.59
USP11-204ENST00000377107 KRTAP19-8Q3LI54 63 aa5.09□□□□□ -1.59
USP11-204ENST00000377107 PRO2289Q9P1D8 64 aa5.05□□□□□ -1.6
USP11-204ENST00000377107 SPRR5A0A1B0GTR4 108 aa5.03□□□□□ -1.6
USP11-204ENST00000377107 KRTAP9-3Q9BYQ3 159 aa5.03□□□□□ -1.6
USP11-204ENST00000377107 KMT2DO14686 5537 aa5.03□□□□□ -1.6
USP11-204ENST00000377107 KRTAP8-1Q8IUC2 63 aa5.02□□□□□ -1.61
USP11-204ENST00000377107 FSIP2Q5CZC0 6907 aa4.98□□□□□ -1.61
USP11-204ENST00000377107 LCE2BO14633 110 aa4.93□□□□□ -1.62
USP11-204ENST00000377107 KRTAP4-8A0A0G2JLE6 195 aa4.89□□□□□ -1.63
USP11-204ENST00000377107 KRTAP19-5Q3LI72 72 aa4.89□□□□□ -1.63
USP11-204ENST00000377107 KRTAP4-8Q9BYQ9 185 aa4.89□□□□□ -1.63
USP11-204ENST00000377107 LCE3CQ5T5A8 94 aa4.72□□□□□ -1.65
USP11-204ENST00000377107 KRTAP4-7Q9BYR0 210 aa4.71□□□□□ -1.65
USP11-204ENST00000377107 LCE2AQ5TA79 106 aaPredicted RBP4.68□□□□□ -1.66
USP11-204ENST00000377107 KRTAP9-6A8MVA2 160 aa4.56□□□□□ -1.68
USP11-204ENST00000377107 DSTQ03001 7570 aaKnown RBP4.55□□□□□ -1.68
USP11-204ENST00000377107 CRCT1Q9UGL9 99 aa4.55□□□□□ -1.68
USP11-204ENST00000377107 INE1O15225 51 aa4.54□□□□□ -1.68
USP11-204ENST00000377107 KRTAP19-7Q3SYF9 63 aa4.54□□□□□ -1.68
USP11-204ENST00000377107 SSPOA2VEC9 5147 aa4.52□□□□□ -1.69
USP11-204ENST00000377107 LCE2DQ5TA82 110 aaPredicted RBP4.48□□□□□ -1.69
USP11-204ENST00000377107 MUC12Q9UKN1 5478 aa4.45□□□□□ -1.7
USP11-204ENST00000377107 MT1LQ93083 61 aa4.44□□□□□ -1.7
USP11-204ENST00000377107 MT1EP04732 61 aa4.43□□□□□ -1.7
USP11-204ENST00000377107 KRTAP4-3Q9BYR4 195 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 217.7 ms