RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 KRTAP3-3Q9BYR6 98 aa6.82□□□□□ -1.32
ACTN1-202ENST00000376839 KRTAP25-1Q3LHN0 102 aa6.81□□□□□ -1.32
ACTN1-202ENST00000376839 KRTAP10-8P60410 259 aa6.8□□□□□ -1.32
ACTN1-202ENST00000376839 KRTAP10-6P60371 365 aaPredicted RBP6.79□□□□□ -1.32
ACTN1-202ENST00000376839 RPL37P61927 97 aaKnown RBP6.78□□□□□ -1.32
ACTN1-202ENST00000376839 H3BS24 57 aa6.77□□□□□ -1.33
ACTN1-202ENST00000376839 KRTAP13-4Q3LI77 160 aa6.76□□□□□ -1.33
ACTN1-202ENST00000376839 CRIPTQ9P021 101 aa6.76□□□□□ -1.33
ACTN1-202ENST00000376839 K7ERS5 55 aa6.75□□□□□ -1.33
ACTN1-202ENST00000376839 XP32Q5T750 250 aa6.75□□□□□ -1.33
ACTN1-202ENST00000376839 KRTAP3-2Q9BYR7 98 aa6.74□□□□□ -1.33
ACTN1-202ENST00000376839 Q5VSD8 79 aa6.73□□□□□ -1.33
ACTN1-202ENST00000376839 A0A0D9SG42 100 aa6.71□□□□□ -1.34
ACTN1-202ENST00000376839 S4R3F8 94 aa6.71□□□□□ -1.34
ACTN1-202ENST00000376839 RYR1P21817 5038 aa6.69□□□□□ -1.34
ACTN1-202ENST00000376839 KRTAP17-1Q9BYP8 105 aa6.68□□□□□ -1.34
ACTN1-202ENST00000376839 P0C880 135 aa6.67□□□□□ -1.34
ACTN1-202ENST00000376839 LPAP08519 4548 aa6.66□□□□□ -1.34
ACTN1-202ENST00000376839 ROMO1P60602 79 aa6.65□□□□□ -1.34
ACTN1-202ENST00000376839 RYR3Q15413 4870 aa6.64□□□□□ -1.35
ACTN1-202ENST00000376839 A0A0A0MQY5 61 aa6.62□□□□□ -1.35
ACTN1-202ENST00000376839 KIAA1109Q2LD37 5005 aa6.61□□□□□ -1.35
ACTN1-202ENST00000376839 LRP2P98164 4655 aa6.59□□□□□ -1.36
ACTN1-202ENST00000376839 MT1HL1P0DM35 61 aa6.58□□□□□ -1.36
ACTN1-202ENST00000376839 J3QL48 77 aa6.56□□□□□ -1.36
ACTN1-202ENST00000376839 TPRXLQ17RH7 258 aa6.54□□□□□ -1.36
ACTN1-202ENST00000376839 KRTAP12-2P59991 146 aa6.53□□□□□ -1.36
ACTN1-202ENST00000376839 C10orf95Q9H7T3 257 aa6.5□□□□□ -1.37
ACTN1-202ENST00000376839 KRTAP12-1P59990 96 aa6.47□□□□□ -1.37
ACTN1-202ENST00000376839 SPINT4Q6UDR6 99 aa6.45□□□□□ -1.38
ACTN1-202ENST00000376839 ABCA13Q86UQ4 5058 aa6.43□□□□□ -1.38
ACTN1-202ENST00000376839 EPPK1P58107 5090 aaKnown RBP6.4□□□□□ -1.38
ACTN1-202ENST00000376839 M0QZ58 72 aa6.37□□□□□ -1.39
ACTN1-202ENST00000376839 MUC17Q685J3 4493 aa6.29□□□□□ -1.4
ACTN1-202ENST00000376839 KRTAP4-5Q9BYR2 181 aa6.27□□□□□ -1.41
ACTN1-202ENST00000376839 KRTAP15-1Q3LI76 137 aa6.23□□□□□ -1.41
ACTN1-202ENST00000376839 R4GN34 69 aa6.23□□□□□ -1.41
ACTN1-202ENST00000376839 LORP23490 312 aaPredicted RBP6.21□□□□□ -1.42
ACTN1-202ENST00000376839 KRTAP4-1Q9BYQ7 146 aa6.19□□□□□ -1.42
ACTN1-202ENST00000376839 SEC61BP60468 96 aaKnown RBP6.16□□□□□ -1.42
ACTN1-202ENST00000376839 NDUFAF8A1L188 74 aa6.12□□□□□ -1.43
ACTN1-202ENST00000376839 KRTAP19-2Q3LHN2 52 aa6.07□□□□□ -1.44
ACTN1-202ENST00000376839 HERC2O95714 4834 aa6.06□□□□□ -1.44
ACTN1-202ENST00000376839 MUC2Q02817 5179 aa6.05□□□□□ -1.44
ACTN1-202ENST00000376839 FLGP20930 4061 aaPredicted RBP5.96□□□□□ -1.46
ACTN1-202ENST00000376839 CAMK2N1Q7Z7J9 78 aa5.93□□□□□ -1.46
ACTN1-202ENST00000376839 PLAC4Q8WY50 150 aa5.92□□□□□ -1.46
ACTN1-202ENST00000376839 BIRC6Q9NR09 4857 aa5.91□□□□□ -1.46
ACTN1-202ENST00000376839 LCE2DQ5TA82 110 aaPredicted RBP5.86□□□□□ -1.47
ACTN1-202ENST00000376839 PCLOQ9Y6V0 5065 aa5.86□□□□□ -1.47
ACTN1-202ENST00000376839 HERC1Q15751 4861 aa5.82□□□□□ -1.48
ACTN1-202ENST00000376839 PP632Q6XCG6 107 aa5.82□□□□□ -1.48
ACTN1-202ENST00000376839 FAT4Q6V0I7 4981 aa5.75□□□□□ -1.49
ACTN1-202ENST00000376839 HMCN2Q8NDA2 5059 aa5.75□□□□□ -1.49
ACTN1-202ENST00000376839 TNP1P09430 55 aa5.7□□□□□ -1.5
ACTN1-202ENST00000376839 LCE2CQ5TA81 110 aa5.67□□□□□ -1.5
ACTN1-202ENST00000376839 LUZP6Q538Z0 58 aa5.63□□□□□ -1.51
ACTN1-202ENST00000376839 KRTAP23-1A1A580 65 aa5.59□□□□□ -1.51
ACTN1-202ENST00000376839 KRTAP19-1Q8IUB9 90 aa5.59□□□□□ -1.51
ACTN1-202ENST00000376839 SPRR2GQ9BYE4 73 aa5.59□□□□□ -1.51
ACTN1-202ENST00000376839 RNF213Q63HN8 5207 aa5.55□□□□□ -1.52
ACTN1-202ENST00000376839 M0R2T5 61 aa5.52□□□□□ -1.53
ACTN1-202ENST00000376839 UBR4Q5T4S7 5183 aa5.51□□□□□ -1.53
ACTN1-202ENST00000376839 SPRR5A0A1B0GTR4 108 aa5.5□□□□□ -1.53
ACTN1-202ENST00000376839 MT1HP80294 61 aa5.5□□□□□ -1.53
ACTN1-202ENST00000376839 MT1FP04733 61 aa5.46□□□□□ -1.54
ACTN1-202ENST00000376839 MT2AP02795 61 aa5.44□□□□□ -1.54
ACTN1-202ENST00000376839 LCE3AQ5TA76 89 aa5.44□□□□□ -1.54
ACTN1-202ENST00000376839 KRTAP10-10P60014 251 aa5.43□□□□□ -1.54
ACTN1-202ENST00000376839 KRTAP9-8Q9BYQ0 159 aa5.39□□□□□ -1.55
ACTN1-202ENST00000376839 KRTAP19-8Q3LI54 63 aa5.32□□□□□ -1.56
ACTN1-202ENST00000376839 MT1BP07438 61 aa5.29□□□□□ -1.56
ACTN1-202ENST00000376839 KRTAP10-5P60370 271 aa5.28□□□□□ -1.56
ACTN1-202ENST00000376839 MT1XP80297 61 aa5.27□□□□□ -1.57
ACTN1-202ENST00000376839 KRTAP8-1Q8IUC2 63 aa5.27□□□□□ -1.57
ACTN1-202ENST00000376839 LCE2BO14633 110 aa5.22□□□□□ -1.57
ACTN1-202ENST00000376839 KRTAP10-12P60413 245 aa5.18□□□□□ -1.58
ACTN1-202ENST00000376839 LCE2AQ5TA79 106 aaPredicted RBP5.18□□□□□ -1.58
ACTN1-202ENST00000376839 KRTAP9-3Q9BYQ3 159 aa5.15□□□□□ -1.58
ACTN1-202ENST00000376839 KRTAP12-3P60328 96 aa5.15□□□□□ -1.59
ACTN1-202ENST00000376839 KRTAP10-7P60409 375 aaPredicted RBP5.15□□□□□ -1.59
ACTN1-202ENST00000376839 USH2AO75445 5202 aa5□□□□□ -1.61
ACTN1-202ENST00000376839 PRO2289Q9P1D8 64 aa4.99□□□□□ -1.61
ACTN1-202ENST00000376839 KMT2DO14686 5537 aa4.97□□□□□ -1.61
ACTN1-202ENST00000376839 KRTAP19-5Q3LI72 72 aa4.94□□□□□ -1.62
ACTN1-202ENST00000376839 INE1O15225 51 aa4.85□□□□□ -1.63
ACTN1-202ENST00000376839 LCE3CQ5T5A8 94 aa4.85□□□□□ -1.63
ACTN1-202ENST00000376839 KRTAP4-8A0A0G2JLE6 195 aa4.83□□□□□ -1.64
ACTN1-202ENST00000376839 KRTAP4-8Q9BYQ9 185 aa4.83□□□□□ -1.64
ACTN1-202ENST00000376839 KRTAP9-6A8MVA2 160 aa4.74□□□□□ -1.65
ACTN1-202ENST00000376839 KRTAP19-7Q3SYF9 63 aa4.7□□□□□ -1.66
ACTN1-202ENST00000376839 KRTAP4-7Q9BYR0 210 aa4.68□□□□□ -1.66
ACTN1-202ENST00000376839 SSPOA2VEC9 5147 aa4.57□□□□□ -1.68
ACTN1-202ENST00000376839 MT1LQ93083 61 aa4.56□□□□□ -1.68
ACTN1-202ENST00000376839 MT1EP04732 61 aa4.55□□□□□ -1.68
ACTN1-202ENST00000376839 KRTAP2-3P0C7H8 128 aa4.55□□□□□ -1.68
ACTN1-202ENST00000376839 KRTAP2-4Q9BYR9 128 aa4.55□□□□□ -1.68
ACTN1-202ENST00000376839 KRTAP2-1Q9BYU5 128 aa4.55□□□□□ -1.68
ACTN1-202ENST00000376839 KRTAP19-4Q3LI73 84 aa4.45□□□□□ -1.7
ACTN1-202ENST00000376839 FSIP2Q5CZC0 6907 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms