RNA–Protein interactions for RNA: ENST00000376233.7

ZNF549-202, Transcript of zinc finger protein 549, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF549, Length 4,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549-202ENST00000376233 PKHD1P08F94 4074 aa5.42□□□□□ -1.54
ZNF549-202ENST00000376233 R4GN34 69 aa5.4□□□□□ -1.54
ZNF549-202ENST00000376233 M0QZ58 72 aa5.39□□□□□ -1.55
ZNF549-202ENST00000376233 SEC61BP60468 96 aaKnown RBP5.37□□□□□ -1.55
ZNF549-202ENST00000376233 MYCBP2O75592 4640 aa5.35□□□□□ -1.55
ZNF549-202ENST00000376233 C10orf95Q9H7T3 257 aa5.33□□□□□ -1.56
ZNF549-202ENST00000376233 FAT2Q9NYQ8 4349 aa5.32□□□□□ -1.56
ZNF549-202ENST00000376233 SACSQ9NZJ4 4579 aa5.32□□□□□ -1.56
ZNF549-202ENST00000376233 KRTAP13-4Q3LI77 160 aa5.31□□□□□ -1.56
ZNF549-202ENST00000376233 LRP1Q07954 4544 aaKnown RBP5.3□□□□□ -1.56
ZNF549-202ENST00000376233 KRTAP10-6P60371 365 aaPredicted RBP5.29□□□□□ -1.56
ZNF549-202ENST00000376233 TPRXLQ17RH7 258 aa5.28□□□□□ -1.56
ZNF549-202ENST00000376233 CAMK2N1Q7Z7J9 78 aa5.28□□□□□ -1.56
ZNF549-202ENST00000376233 MT1HL1P0DM35 61 aa5.28□□□□□ -1.56
ZNF549-202ENST00000376233 PKD1P98161 4303 aa5.28□□□□□ -1.56
ZNF549-202ENST00000376233 APOBP04114 4563 aaKnown RBP5.27□□□□□ -1.57
ZNF549-202ENST00000376233 H3BS24 57 aa5.27□□□□□ -1.57
ZNF549-202ENST00000376233 KRTAP3-3Q9BYR6 98 aa5.27□□□□□ -1.57
ZNF549-202ENST00000376233 KIAA1109Q2LD37 5005 aa5.23□□□□□ -1.57
ZNF549-202ENST00000376233 KRTAP12-2P59991 146 aa5.22□□□□□ -1.57
ZNF549-202ENST00000376233 KRTAP3-2Q9BYR7 98 aa5.21□□□□□ -1.58
ZNF549-202ENST00000376233 KRTAP4-5Q9BYR2 181 aa5.19□□□□□ -1.58
ZNF549-202ENST00000376233 FAT3Q8TDW7 4589 aa5.19□□□□□ -1.58
ZNF549-202ENST00000376233 KMT2CQ8NEZ4 4911 aaKnown RBP5.19□□□□□ -1.58
ZNF549-202ENST00000376233 RYR1P21817 5038 aa5.18□□□□□ -1.58
ZNF549-202ENST00000376233 M0R2T5 61 aa5.16□□□□□ -1.58
ZNF549-202ENST00000376233 RYR3Q15413 4870 aa5.15□□□□□ -1.59
ZNF549-202ENST00000376233 RYR2Q92736 4967 aa5.14□□□□□ -1.59
ZNF549-202ENST00000376233 KRTAP17-1Q9BYP8 105 aa5.14□□□□□ -1.59
ZNF549-202ENST00000376233 KRTAP12-1P59990 96 aa5.14□□□□□ -1.59
ZNF549-202ENST00000376233 NDUFAF8A1L188 74 aa5.06□□□□□ -1.6
ZNF549-202ENST00000376233 LRP2P98164 4655 aa5.03□□□□□ -1.6
ZNF549-202ENST00000376233 HSPG2P98160 4391 aa5.01□□□□□ -1.61
ZNF549-202ENST00000376233 PKHD1L1Q86WI1 4243 aa4.98□□□□□ -1.61
ZNF549-202ENST00000376233 LUZP6Q538Z0 58 aa4.97□□□□□ -1.61
ZNF549-202ENST00000376233 LORP23490 312 aaPredicted RBP4.94□□□□□ -1.62
ZNF549-202ENST00000376233 PLAC4Q8WY50 150 aa4.91□□□□□ -1.62
ZNF549-202ENST00000376233 KRTAP4-1Q9BYQ7 146 aa4.91□□□□□ -1.62
ZNF549-202ENST00000376233 LPAP08519 4548 aa4.9□□□□□ -1.63
ZNF549-202ENST00000376233 TNXBP22105 4242 aa4.89□□□□□ -1.63
ZNF549-202ENST00000376233 TNP1P09430 55 aa4.87□□□□□ -1.63
ZNF549-202ENST00000376233 EPPK1P58107 5090 aaKnown RBP4.84□□□□□ -1.63
ZNF549-202ENST00000376233 HERC2O95714 4834 aa4.79□□□□□ -1.64
ZNF549-202ENST00000376233 KRTAP10-10P60014 251 aa4.78□□□□□ -1.64
ZNF549-202ENST00000376233 PP632Q6XCG6 107 aa4.78□□□□□ -1.64
ZNF549-202ENST00000376233 ABCA13Q86UQ4 5058 aa4.75□□□□□ -1.65
ZNF549-202ENST00000376233 KRTAP15-1Q3LI76 137 aa4.75□□□□□ -1.65
ZNF549-202ENST00000376233 A0A0A0MQY5 61 aa4.65□□□□□ -1.67
ZNF549-202ENST00000376233 MUC2Q02817 5179 aa4.63□□□□□ -1.67
ZNF549-202ENST00000376233 HERC1Q15751 4861 aa4.5□□□□□ -1.69
ZNF549-202ENST00000376233 KRTAP19-2Q3LHN2 52 aa4.49□□□□□ -1.69
ZNF549-202ENST00000376233 BIRC6Q9NR09 4857 aa4.48□□□□□ -1.69
ZNF549-202ENST00000376233 FAT4Q6V0I7 4981 aa4.45□□□□□ -1.7
ZNF549-202ENST00000376233 MT1HP80294 61 aa4.45□□□□□ -1.7
ZNF549-202ENST00000376233 MUC17Q685J3 4493 aa4.43□□□□□ -1.7
ZNF549-202ENST00000376233 LCE3AQ5TA76 89 aa4.42□□□□□ -1.7
ZNF549-202ENST00000376233 RNF213Q63HN8 5207 aa4.41□□□□□ -1.7
ZNF549-202ENST00000376233 MT2AP02795 61 aa4.4□□□□□ -1.7
ZNF549-202ENST00000376233 MT1FP04733 61 aa4.4□□□□□ -1.7
ZNF549-202ENST00000376233 SPRR2GQ9BYE4 73 aa4.39□□□□□ -1.71
ZNF549-202ENST00000376233 PRO2289Q9P1D8 64 aa4.38□□□□□ -1.71
ZNF549-202ENST00000376233 PCLOQ9Y6V0 5065 aa4.38□□□□□ -1.71
ZNF549-202ENST00000376233 LCE2CQ5TA81 110 aa4.38□□□□□ -1.71
ZNF549-202ENST00000376233 KRTAP19-1Q8IUB9 90 aa4.38□□□□□ -1.71
ZNF549-202ENST00000376233 FLGP20930 4061 aaPredicted RBP4.37□□□□□ -1.71
ZNF549-202ENST00000376233 KRTAP10-12P60413 245 aa4.32□□□□□ -1.72
ZNF549-202ENST00000376233 KRTAP23-1A1A580 65 aa4.31□□□□□ -1.72
ZNF549-202ENST00000376233 UBR4Q5T4S7 5183 aa4.3□□□□□ -1.72
ZNF549-202ENST00000376233 HMCN2Q8NDA2 5059 aa4.28□□□□□ -1.72
ZNF549-202ENST00000376233 KRTAP12-3P60328 96 aa4.27□□□□□ -1.73
ZNF549-202ENST00000376233 KRTAP9-8Q9BYQ0 159 aa4.23□□□□□ -1.73
ZNF549-202ENST00000376233 MT1BP07438 61 aa4.16□□□□□ -1.74
ZNF549-202ENST00000376233 KRTAP19-8Q3LI54 63 aa4.15□□□□□ -1.75
ZNF549-202ENST00000376233 MT1XP80297 61 aa4.14□□□□□ -1.75
ZNF549-202ENST00000376233 KRTAP10-7P60409 375 aaPredicted RBP4.13□□□□□ -1.75
ZNF549-202ENST00000376233 KRTAP10-5P60370 271 aa4.13□□□□□ -1.75
ZNF549-202ENST00000376233 KRTAP8-1Q8IUC2 63 aa4.12□□□□□ -1.75
ZNF549-202ENST00000376233 KRTAP9-3Q9BYQ3 159 aa4.06□□□□□ -1.76
ZNF549-202ENST00000376233 SPRR5A0A1B0GTR4 108 aa4.03□□□□□ -1.76
ZNF549-202ENST00000376233 KRTAP19-5Q3LI72 72 aa4.03□□□□□ -1.76
ZNF549-202ENST00000376233 FSIP2Q5CZC0 6907 aa4.01□□□□□ -1.77
ZNF549-202ENST00000376233 KRTAP4-8A0A0G2JLE6 195 aa3.96□□□□□ -1.78
ZNF549-202ENST00000376233 KRTAP4-8Q9BYQ9 185 aa3.96□□□□□ -1.78
ZNF549-202ENST00000376233 LCE2BO14633 110 aa3.95□□□□□ -1.78
ZNF549-202ENST00000376233 USH2AO75445 5202 aa3.94□□□□□ -1.78
ZNF549-202ENST00000376233 CRCT1Q9UGL9 99 aa3.9□□□□□ -1.79
ZNF549-202ENST00000376233 LCE3CQ5T5A8 94 aa3.89□□□□□ -1.79
ZNF549-202ENST00000376233 INE1O15225 51 aa3.88□□□□□ -1.79
ZNF549-202ENST00000376233 KMT2DO14686 5537 aa3.85□□□□□ -1.79
ZNF549-202ENST00000376233 KRTAP4-7Q9BYR0 210 aa3.79□□□□□ -1.8
ZNF549-202ENST00000376233 LCE2AQ5TA79 106 aaPredicted RBP3.74□□□□□ -1.81
ZNF549-202ENST00000376233 KRTAP19-7Q3SYF9 63 aa3.64□□□□□ -1.83
ZNF549-202ENST00000376233 MT1LQ93083 61 aa3.62□□□□□ -1.83
ZNF549-202ENST00000376233 MT1EP04732 61 aa3.61□□□□□ -1.83
ZNF549-202ENST00000376233 SPRR2FQ96RM1 72 aa3.6□□□□□ -1.83
ZNF549-202ENST00000376233 MT1GP13640 62 aa3.59□□□□□ -1.83
ZNF549-202ENST00000376233 DSTQ03001 7570 aaKnown RBP3.59□□□□□ -1.83
ZNF549-202ENST00000376233 KRTAP9-6A8MVA2 160 aa3.59□□□□□ -1.84
ZNF549-202ENST00000376233 SYNE1Q8NF91 8797 aaKnown RBP3.55□□□□□ -1.84
ZNF549-202ENST00000376233 KRTAP4-3Q9BYR4 195 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms