RNA–Protein interactions for RNA: ENST00000375437.6

SCN2A-203, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-203ENST00000375437 DNAH1Q9P2D7 4330 aa2.26□□□□□ -2.05
SCN2A-203ENST00000375437 KRTAP17-1Q9BYP8 105 aa2.24□□□□□ -2.05
SCN2A-203ENST00000375437 CSMD3Q7Z407 3707 aa2.23□□□□□ -2.05
SCN2A-203ENST00000375437 KRTAP3-3Q9BYR6 98 aa2.22□□□□□ -2.05
SCN2A-203ENST00000375437 RYR1P21817 5038 aa2.22□□□□□ -2.05
SCN2A-203ENST00000375437 LYSTQ99698 3801 aa2.21□□□□□ -2.06
SCN2A-203ENST00000375437 CUBNO60494 3623 aa2.2□□□□□ -2.06
SCN2A-203ENST00000375437 SPRR2FQ96RM1 72 aa2.2□□□□□ -2.06
SCN2A-203ENST00000375437 ANK2Q01484 3957 aa2.19□□□□□ -2.06
SCN2A-203ENST00000375437 CSMD2Q7Z408 3487 aa2.18□□□□□ -2.06
SCN2A-203ENST00000375437 DNAH3Q8TD57 4116 aa2.18□□□□□ -2.06
SCN2A-203ENST00000375437 HUWE1Q7Z6Z7 4374 aaKnown RBP2.17□□□□□ -2.06
SCN2A-203ENST00000375437 DNAH6Q9C0G6 4158 aa2.14□□□□□ -2.07
SCN2A-203ENST00000375437 KRTAP4-5Q9BYR2 181 aa2.14□□□□□ -2.07
SCN2A-203ENST00000375437 KMT2AQ03164 3969 aa2.13□□□□□ -2.07
SCN2A-203ENST00000375437 SVEP1Q4LDE5 3571 aa2.13□□□□□ -2.07
SCN2A-203ENST00000375437 SPRR2EP22531 72 aa2.12□□□□□ -2.07
SCN2A-203ENST00000375437 SPRR2BP35325 72 aa2.12□□□□□ -2.07
SCN2A-203ENST00000375437 SPRR2AP35326 72 aa2.12□□□□□ -2.07
SCN2A-203ENST00000375437 KRTAP10-4P60372 401 aaPredicted RBP2.12□□□□□ -2.07
SCN2A-203ENST00000375437 MT3P25713 68 aa2.12□□□□□ -2.07
SCN2A-203ENST00000375437 DNAH2Q9P225 4427 aa2.12□□□□□ -2.07
SCN2A-203ENST00000375437 ZNF469Q96JG9 3925 aaPredicted RBP2.12□□□□□ -2.07
SCN2A-203ENST00000375437 KRTAP12-4P60329 112 aa2.1□□□□□ -2.07
SCN2A-203ENST00000375437 LCE3CQ5T5A8 94 aa2.09□□□□□ -2.07
SCN2A-203ENST00000375437 SPRR2GQ9BYE4 73 aa2.09□□□□□ -2.07
SCN2A-203ENST00000375437 VPS13BQ7Z7G8 4022 aa2.08□□□□□ -2.08
SCN2A-203ENST00000375437 ANK3Q12955 4377 aaKnown RBP2.07□□□□□ -2.08
SCN2A-203ENST00000375437 SPRR2DP22532 72 aa2.07□□□□□ -2.08
SCN2A-203ENST00000375437 MT1HP80294 61 aa2.07□□□□□ -2.08
SCN2A-203ENST00000375437 HECTD4Q9Y4D8 3996 aa2.07□□□□□ -2.08
SCN2A-203ENST00000375437 FRAS1Q86XX4 4008 aa2.07□□□□□ -2.08
SCN2A-203ENST00000375437 LCE2BO14633 110 aa2.06□□□□□ -2.08
SCN2A-203ENST00000375437 KRTAP19-5Q3LI72 72 aa2.06□□□□□ -2.08
SCN2A-203ENST00000375437 FLGP20930 4061 aaPredicted RBP2.05□□□□□ -2.08
SCN2A-203ENST00000375437 PRKDCP78527 4128 aaKnown RBP2.03□□□□□ -2.08
SCN2A-203ENST00000375437 LCE3BQ5TA77 95 aa2□□□□□ -2.09
SCN2A-203ENST00000375437 SPRR5A0A1B0GTR4 108 aa2□□□□□ -2.09
SCN2A-203ENST00000375437 MT2AP02795 61 aa1.99□□□□□ -2.09
SCN2A-203ENST00000375437 FAT2Q9NYQ8 4349 aa1.97□□□□□ -2.09
SCN2A-203ENST00000375437 LCE2CQ5TA81 110 aa1.96□□□□□ -2.1
SCN2A-203ENST00000375437 DNAH10Q8IVF4 4471 aa1.96□□□□□ -2.1
SCN2A-203ENST00000375437 KIAA1109Q2LD37 5005 aa1.96□□□□□ -2.1
SCN2A-203ENST00000375437 DNHD1Q96M86 4753 aa1.95□□□□□ -2.1
SCN2A-203ENST00000375437 DYNC1H1Q14204 4646 aaKnown RBP1.93□□□□□ -2.1
SCN2A-203ENST00000375437 MT1FP04733 61 aa1.92□□□□□ -2.1
SCN2A-203ENST00000375437 KRTAP19-8Q3LI54 63 aa1.92□□□□□ -2.1
SCN2A-203ENST00000375437 LCE3DQ9BYE3 92 aa1.91□□□□□ -2.1
SCN2A-203ENST00000375437 VPS13DQ5THJ4 4388 aa1.91□□□□□ -2.1
SCN2A-203ENST00000375437 PLECQ15149 4684 aaKnown RBP1.91□□□□□ -2.1
SCN2A-203ENST00000375437 LCE2DQ5TA82 110 aaPredicted RBP1.9□□□□□ -2.1
SCN2A-203ENST00000375437 KRTAP4-1Q9BYQ7 146 aa1.89□□□□□ -2.11
SCN2A-203ENST00000375437 HERC1Q15751 4861 aa1.89□□□□□ -2.11
SCN2A-203ENST00000375437 MT1GP13640 62 aa1.88□□□□□ -2.11
SCN2A-203ENST00000375437 HYDINQ4G0P3 5121 aa1.87□□□□□ -2.11
SCN2A-203ENST00000375437 DYNC2H1Q8NCM8 4307 aaKnown RBP1.87□□□□□ -2.11
SCN2A-203ENST00000375437 ABCA13Q86UQ4 5058 aa1.86□□□□□ -2.11
SCN2A-203ENST00000375437 LCE3EQ5T5B0 92 aa1.86□□□□□ -2.11
SCN2A-203ENST00000375437 DNAH9Q9NYC9 4486 aa1.85□□□□□ -2.11
SCN2A-203ENST00000375437 PKHD1L1Q86WI1 4243 aa1.85□□□□□ -2.11
SCN2A-203ENST00000375437 DNAH5Q8TE73 4624 aa1.85□□□□□ -2.11
SCN2A-203ENST00000375437 PKHD1P08F94 4074 aa1.84□□□□□ -2.11
SCN2A-203ENST00000375437 FAT1Q14517 4588 aa1.84□□□□□ -2.11
SCN2A-203ENST00000375437 DNAH17Q9UFH2 4485 aa1.84□□□□□ -2.12
SCN2A-203ENST00000375437 DNAH11Q96DT5 4516 aa1.83□□□□□ -2.12
SCN2A-203ENST00000375437 BIRC6Q9NR09 4857 aa1.83□□□□□ -2.12
SCN2A-203ENST00000375437 LRP1Q07954 4544 aaKnown RBP1.83□□□□□ -2.12
SCN2A-203ENST00000375437 KMT2CQ8NEZ4 4911 aaKnown RBP1.82□□□□□ -2.12
SCN2A-203ENST00000375437 LRP1BQ9NZR2 4599 aa1.82□□□□□ -2.12
SCN2A-203ENST00000375437 SACSQ9NZJ4 4579 aa1.82□□□□□ -2.12
SCN2A-203ENST00000375437 RYR2Q92736 4967 aa1.82□□□□□ -2.12
SCN2A-203ENST00000375437 DNAH8Q96JB1 4490 aa1.82□□□□□ -2.12
SCN2A-203ENST00000375437 RYR3Q15413 4870 aa1.81□□□□□ -2.12
SCN2A-203ENST00000375437 KRTAP19-1Q8IUB9 90 aa1.8□□□□□ -2.12
SCN2A-203ENST00000375437 MT4P47944 62 aa1.79□□□□□ -2.12
SCN2A-203ENST00000375437 MT1XP80297 61 aa1.77□□□□□ -2.13
SCN2A-203ENST00000375437 KRTAP19-3Q7Z4W3 81 aa1.77□□□□□ -2.13
SCN2A-203ENST00000375437 MT1LQ93083 61 aa1.76□□□□□ -2.13
SCN2A-203ENST00000375437 STARD9Q9P2P6 4700 aa1.76□□□□□ -2.13
SCN2A-203ENST00000375437 LCE1BQ5T7P3 118 aa1.75□□□□□ -2.13
SCN2A-203ENST00000375437 PCLOQ9Y6V0 5065 aa1.74□□□□□ -2.13
SCN2A-203ENST00000375437 EPPK1P58107 5090 aaKnown RBP1.74□□□□□ -2.13
SCN2A-203ENST00000375437 HERC2O95714 4834 aa1.74□□□□□ -2.13
SCN2A-203ENST00000375437 LCE1DQ5T752 114 aa1.74□□□□□ -2.13
SCN2A-203ENST00000375437 PKD1P98161 4303 aa1.72□□□□□ -2.13
SCN2A-203ENST00000375437 HSPG2P98160 4391 aa1.71□□□□□ -2.13
SCN2A-203ENST00000375437 APOBP04114 4563 aaKnown RBP1.7□□□□□ -2.14
SCN2A-203ENST00000375437 MT1EP04732 61 aa1.7□□□□□ -2.14
SCN2A-203ENST00000375437 KRTAP20-1Q3LI63 56 aa1.69□□□□□ -2.14
SCN2A-203ENST00000375437 LCE5AQ5TCM9 118 aa1.69□□□□□ -2.14
SCN2A-203ENST00000375437 PRM1P04553 51 aa1.69□□□□□ -2.14
SCN2A-203ENST00000375437 KRTAP9-8Q9BYQ0 159 aa1.68□□□□□ -2.14
SCN2A-203ENST00000375437 UBR4Q5T4S7 5183 aa1.67□□□□□ -2.14
SCN2A-203ENST00000375437 KRTAP4-8A0A0G2JLE6 195 aa1.67□□□□□ -2.14
SCN2A-203ENST00000375437 KRTAP4-8Q9BYQ9 185 aa1.67□□□□□ -2.14
SCN2A-203ENST00000375437 TNXBP22105 4242 aa1.67□□□□□ -2.14
SCN2A-203ENST00000375437 MT1BP07438 61 aa1.67□□□□□ -2.14
SCN2A-203ENST00000375437 MYCBP2O75592 4640 aa1.66□□□□□ -2.14
SCN2A-203ENST00000375437 KRTAP9-2Q9BYQ4 174 aa1.65□□□□□ -2.14
SCN2A-203ENST00000375437 KRTAP9-3Q9BYQ3 159 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms