RNA–Protein interactions for RNA: ENST00000374884.2

SPIN4-201, Transcript of spindlin family member 4, humanhuman

APPRIS P1 BASIC

Gene SPIN4, Length 4,117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN4-201ENST00000374884 DNAH7Q8WXX0 4024 aa4.72□□□□□ -1.65
SPIN4-201ENST00000374884 A0A1B0GVY2 172 aa4.72□□□□□ -1.65
SPIN4-201ENST00000374884 KRTAP15-1Q3LI76 137 aa4.69□□□□□ -1.66
SPIN4-201ENST00000374884 VPS13DQ5THJ4 4388 aa4.68□□□□□ -1.66
SPIN4-201ENST00000374884 KRTAP3-2Q9BYR7 98 aa4.67□□□□□ -1.66
SPIN4-201ENST00000374884 KRTAP3-3Q9BYR6 98 aa4.66□□□□□ -1.66
SPIN4-201ENST00000374884 DNAH5Q8TE73 4624 aa4.65□□□□□ -1.66
SPIN4-201ENST00000374884 FAT1Q14517 4588 aa4.62□□□□□ -1.67
SPIN4-201ENST00000374884 HYDINQ4G0P3 5121 aa4.61□□□□□ -1.67
SPIN4-201ENST00000374884 DNAH2Q9P225 4427 aa4.56□□□□□ -1.68
SPIN4-201ENST00000374884 LRP1BQ9NZR2 4599 aa4.56□□□□□ -1.68
SPIN4-201ENST00000374884 KMT2CQ8NEZ4 4911 aaKnown RBP4.56□□□□□ -1.68
SPIN4-201ENST00000374884 DYNC1H1Q14204 4646 aaKnown RBP4.56□□□□□ -1.68
SPIN4-201ENST00000374884 DNAH6Q9C0G6 4158 aa4.55□□□□□ -1.68
SPIN4-201ENST00000374884 KIAA1109Q2LD37 5005 aa4.54□□□□□ -1.68
SPIN4-201ENST00000374884 DYNC2H1Q8NCM8 4307 aaKnown RBP4.54□□□□□ -1.68
SPIN4-201ENST00000374884 DNAH17Q9UFH2 4485 aa4.53□□□□□ -1.68
SPIN4-201ENST00000374884 KRTAP4-5Q9BYR2 181 aa4.53□□□□□ -1.69
SPIN4-201ENST00000374884 SACSQ9NZJ4 4579 aa4.52□□□□□ -1.69
SPIN4-201ENST00000374884 DNAH8Q96JB1 4490 aa4.51□□□□□ -1.69
SPIN4-201ENST00000374884 ALMS1Q8TCU4 4167 aa4.51□□□□□ -1.69
SPIN4-201ENST00000374884 PKHD1P08F94 4074 aa4.49□□□□□ -1.69
SPIN4-201ENST00000374884 KRTAP10-4P60372 401 aaPredicted RBP4.48□□□□□ -1.69
SPIN4-201ENST00000374884 RYR3Q15413 4870 aa4.47□□□□□ -1.69
SPIN4-201ENST00000374884 FRAS1Q86XX4 4008 aa4.46□□□□□ -1.69
SPIN4-201ENST00000374884 HECTD4Q9Y4D8 3996 aa4.46□□□□□ -1.7
SPIN4-201ENST00000374884 RYR1P21817 5038 aa4.45□□□□□ -1.7
SPIN4-201ENST00000374884 RYR2Q92736 4967 aa4.43□□□□□ -1.7
SPIN4-201ENST00000374884 VPS13BQ7Z7G8 4022 aa4.43□□□□□ -1.7
SPIN4-201ENST00000374884 APOBP04114 4563 aaKnown RBP4.42□□□□□ -1.7
SPIN4-201ENST00000374884 LRP1Q07954 4544 aaKnown RBP4.4□□□□□ -1.71
SPIN4-201ENST00000374884 MYCBP2O75592 4640 aa4.39□□□□□ -1.71
SPIN4-201ENST00000374884 MT1HL1P0DM35 61 aa4.38□□□□□ -1.71
SPIN4-201ENST00000374884 KRTAP17-1Q9BYP8 105 aa4.38□□□□□ -1.71
SPIN4-201ENST00000374884 FAT2Q9NYQ8 4349 aa4.37□□□□□ -1.71
SPIN4-201ENST00000374884 FAT3Q8TDW7 4589 aa4.35□□□□□ -1.71
SPIN4-201ENST00000374884 EPPK1P58107 5090 aaKnown RBP4.3□□□□□ -1.72
SPIN4-201ENST00000374884 PKD1P98161 4303 aa4.3□□□□□ -1.72
SPIN4-201ENST00000374884 KRTAP10-10P60014 251 aa4.29□□□□□ -1.72
SPIN4-201ENST00000374884 LORP23490 312 aaPredicted RBP4.26□□□□□ -1.73
SPIN4-201ENST00000374884 HERC2O95714 4834 aa4.23□□□□□ -1.73
SPIN4-201ENST00000374884 HSPG2P98160 4391 aa4.22□□□□□ -1.73
SPIN4-201ENST00000374884 KRTAP23-1A1A580 65 aa4.2□□□□□ -1.74
SPIN4-201ENST00000374884 INE1O15225 51 aa4.17□□□□□ -1.74
SPIN4-201ENST00000374884 PRO2289Q9P1D8 64 aa4.16□□□□□ -1.74
SPIN4-201ENST00000374884 LRP2P98164 4655 aa4.15□□□□□ -1.75
SPIN4-201ENST00000374884 ABCA13Q86UQ4 5058 aa4.11□□□□□ -1.75
SPIN4-201ENST00000374884 BIRC6Q9NR09 4857 aa4.11□□□□□ -1.75
SPIN4-201ENST00000374884 LPAP08519 4548 aa4.05□□□□□ -1.76
SPIN4-201ENST00000374884 LCE3AQ5TA76 89 aa4.03□□□□□ -1.76
SPIN4-201ENST00000374884 KRTAP4-1Q9BYQ7 146 aa4.02□□□□□ -1.77
SPIN4-201ENST00000374884 PKHD1L1Q86WI1 4243 aa4□□□□□ -1.77
SPIN4-201ENST00000374884 HERC1Q15751 4861 aa3.99□□□□□ -1.77
SPIN4-201ENST00000374884 KRTAP12-3P60328 96 aa3.98□□□□□ -1.77
SPIN4-201ENST00000374884 KRTAP10-12P60413 245 aa3.98□□□□□ -1.77
SPIN4-201ENST00000374884 TNXBP22105 4242 aa3.94□□□□□ -1.78
SPIN4-201ENST00000374884 MUC2Q02817 5179 aa3.9□□□□□ -1.78
SPIN4-201ENST00000374884 PCLOQ9Y6V0 5065 aa3.9□□□□□ -1.79
SPIN4-201ENST00000374884 RNF213Q63HN8 5207 aa3.89□□□□□ -1.79
SPIN4-201ENST00000374884 LCE2DQ5TA82 110 aaPredicted RBP3.87□□□□□ -1.79
SPIN4-201ENST00000374884 SPRR2GQ9BYE4 73 aa3.84□□□□□ -1.79
SPIN4-201ENST00000374884 UBR4Q5T4S7 5183 aa3.84□□□□□ -1.8
SPIN4-201ENST00000374884 SPRR5A0A1B0GTR4 108 aa3.82□□□□□ -1.8
SPIN4-201ENST00000374884 KRTAP8-1Q8IUC2 63 aa3.78□□□□□ -1.8
SPIN4-201ENST00000374884 FAT4Q6V0I7 4981 aa3.76□□□□□ -1.81
SPIN4-201ENST00000374884 MT1HP80294 61 aa3.72□□□□□ -1.81
SPIN4-201ENST00000374884 HMCN2Q8NDA2 5059 aa3.71□□□□□ -1.82
SPIN4-201ENST00000374884 MT2AP02795 61 aa3.7□□□□□ -1.82
SPIN4-201ENST00000374884 KRTAP19-1Q8IUB9 90 aa3.7□□□□□ -1.82
SPIN4-201ENST00000374884 MT1FP04733 61 aa3.67□□□□□ -1.82
SPIN4-201ENST00000374884 FSIP2Q5CZC0 6907 aa3.63□□□□□ -1.83
SPIN4-201ENST00000374884 LCE2CQ5TA81 110 aa3.62□□□□□ -1.83
SPIN4-201ENST00000374884 LCE3CQ5T5A8 94 aa3.59□□□□□ -1.83
SPIN4-201ENST00000374884 KRTAP19-2Q3LHN2 52 aa3.59□□□□□ -1.83
SPIN4-201ENST00000374884 KRTAP19-8Q3LI54 63 aa3.58□□□□□ -1.84
SPIN4-201ENST00000374884 KRTAP19-5Q3LI72 72 aa3.57□□□□□ -1.84
SPIN4-201ENST00000374884 CRCT1Q9UGL9 99 aa3.56□□□□□ -1.84
SPIN4-201ENST00000374884 MUC17Q685J3 4493 aa3.55□□□□□ -1.84
SPIN4-201ENST00000374884 KRTAP10-7P60409 375 aaPredicted RBP3.54□□□□□ -1.84
SPIN4-201ENST00000374884 FLGP20930 4061 aaPredicted RBP3.53□□□□□ -1.84
SPIN4-201ENST00000374884 MT1XP80297 61 aa3.53□□□□□ -1.84
SPIN4-201ENST00000374884 KRTAP10-5P60370 271 aa3.52□□□□□ -1.85
SPIN4-201ENST00000374884 KRTAP9-8Q9BYQ0 159 aa3.49□□□□□ -1.85
SPIN4-201ENST00000374884 MT1BP07438 61 aa3.48□□□□□ -1.85
SPIN4-201ENST00000374884 KRTAP19-4Q3LI73 84 aa3.42□□□□□ -1.86
SPIN4-201ENST00000374884 LCE2BO14633 110 aa3.37□□□□□ -1.87
SPIN4-201ENST00000374884 USH2AO75445 5202 aa3.37□□□□□ -1.87
SPIN4-201ENST00000374884 KRTAP9-3Q9BYQ3 159 aa3.35□□□□□ -1.87
SPIN4-201ENST00000374884 KRTAP4-8A0A0G2JLE6 195 aa3.31□□□□□ -1.88
SPIN4-201ENST00000374884 LCE2AQ5TA79 106 aaPredicted RBP3.31□□□□□ -1.88
SPIN4-201ENST00000374884 KRTAP4-8Q9BYQ9 185 aa3.31□□□□□ -1.88
SPIN4-201ENST00000374884 KRTAP12-4P60329 112 aa3.27□□□□□ -1.89
SPIN4-201ENST00000374884 KRTAP4-7Q9BYR0 210 aa3.22□□□□□ -1.89
SPIN4-201ENST00000374884 MT1GP13640 62 aa3.17□□□□□ -1.9
SPIN4-201ENST00000374884 KMT2DO14686 5537 aa3.15□□□□□ -1.9
SPIN4-201ENST00000374884 MT1LQ93083 61 aa3.15□□□□□ -1.91
SPIN4-201ENST00000374884 SYNE1Q8NF91 8797 aaKnown RBP3.13□□□□□ -1.91
SPIN4-201ENST00000374884 LCE3BQ5TA77 95 aa3.12□□□□□ -1.91
SPIN4-201ENST00000374884 KRTAP2-3P0C7H8 128 aa3.11□□□□□ -1.91
SPIN4-201ENST00000374884 KRTAP2-4Q9BYR9 128 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms