RNA–Protein interactions for RNA: ENST00000373387.8

GARNL3-202, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GARNL3, Length 3,800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-202ENST00000373387 COX6B2Q6YFQ2 88 aa3.92□□□□□ -1.78
GARNL3-202ENST00000373387 J3QL48 77 aa3.9□□□□□ -1.79
GARNL3-202ENST00000373387 KRTAP25-1Q3LHN0 102 aa3.89□□□□□ -1.79
GARNL3-202ENST00000373387 K7ERS5 55 aa3.88□□□□□ -1.79
GARNL3-202ENST00000373387 KRTAP10-6P60371 365 aaPredicted RBP3.88□□□□□ -1.79
GARNL3-202ENST00000373387 KMT2CQ8NEZ4 4911 aaKnown RBP3.85□□□□□ -1.79
GARNL3-202ENST00000373387 KRTAP10-8P60410 259 aa3.84□□□□□ -1.79
GARNL3-202ENST00000373387 KRTAP13-4Q3LI77 160 aa3.83□□□□□ -1.8
GARNL3-202ENST00000373387 Q5VSD8 79 aa3.82□□□□□ -1.8
GARNL3-202ENST00000373387 RPL37P61927 97 aaKnown RBP3.81□□□□□ -1.8
GARNL3-202ENST00000373387 ROMO1P60602 79 aa3.8□□□□□ -1.8
GARNL3-202ENST00000373387 LPAP08519 4548 aa3.79□□□□□ -1.8
GARNL3-202ENST00000373387 H3BS24 57 aa3.79□□□□□ -1.8
GARNL3-202ENST00000373387 XP32Q5T750 250 aa3.78□□□□□ -1.8
GARNL3-202ENST00000373387 RYR1P21817 5038 aa3.78□□□□□ -1.8
GARNL3-202ENST00000373387 S4R3F8 94 aa3.77□□□□□ -1.81
GARNL3-202ENST00000373387 MYCBP2O75592 4640 aa3.77□□□□□ -1.81
GARNL3-202ENST00000373387 KRTAP17-1Q9BYP8 105 aa3.77□□□□□ -1.81
GARNL3-202ENST00000373387 CRIPTQ9P021 101 aa3.75□□□□□ -1.81
GARNL3-202ENST00000373387 RYR3Q15413 4870 aa3.74□□□□□ -1.81
GARNL3-202ENST00000373387 A0A0A0MQY5 61 aa3.74□□□□□ -1.81
GARNL3-202ENST00000373387 A0A0D9SG42 100 aa3.73□□□□□ -1.81
GARNL3-202ENST00000373387 P0C880 135 aa3.73□□□□□ -1.81
GARNL3-202ENST00000373387 TPRXLQ17RH7 258 aa3.72□□□□□ -1.81
GARNL3-202ENST00000373387 MT1HL1P0DM35 61 aa3.71□□□□□ -1.82
GARNL3-202ENST00000373387 KRTAP12-2P59991 146 aa3.69□□□□□ -1.82
GARNL3-202ENST00000373387 LRP2P98164 4655 aa3.69□□□□□ -1.82
GARNL3-202ENST00000373387 KRTAP12-1P59990 96 aa3.67□□□□□ -1.82
GARNL3-202ENST00000373387 MUC17Q685J3 4493 aa3.66□□□□□ -1.82
GARNL3-202ENST00000373387 LCE2BO14633 110 aa3.64□□□□□ -1.83
GARNL3-202ENST00000373387 KIAA1109Q2LD37 5005 aa3.63□□□□□ -1.83
GARNL3-202ENST00000373387 M0QZ58 72 aa3.63□□□□□ -1.83
GARNL3-202ENST00000373387 SPINT4Q6UDR6 99 aa3.63□□□□□ -1.83
GARNL3-202ENST00000373387 C10orf95Q9H7T3 257 aa3.62□□□□□ -1.83
GARNL3-202ENST00000373387 ABCA13Q86UQ4 5058 aa3.62□□□□□ -1.83
GARNL3-202ENST00000373387 KRTAP15-1Q3LI76 137 aa3.61□□□□□ -1.83
GARNL3-202ENST00000373387 EPPK1P58107 5090 aaKnown RBP3.57□□□□□ -1.84
GARNL3-202ENST00000373387 KRTAP4-5Q9BYR2 181 aa3.55□□□□□ -1.84
GARNL3-202ENST00000373387 KRTAP19-2Q3LHN2 52 aa3.53□□□□□ -1.84
GARNL3-202ENST00000373387 SEC61BP60468 96 aaKnown RBP3.53□□□□□ -1.84
GARNL3-202ENST00000373387 LORP23490 312 aaPredicted RBP3.49□□□□□ -1.85
GARNL3-202ENST00000373387 R4GN34 69 aa3.49□□□□□ -1.85
GARNL3-202ENST00000373387 LCE2CQ5TA81 110 aa3.48□□□□□ -1.85
GARNL3-202ENST00000373387 KRTAP4-1Q9BYQ7 146 aa3.48□□□□□ -1.85
GARNL3-202ENST00000373387 NDUFAF8A1L188 74 aa3.47□□□□□ -1.85
GARNL3-202ENST00000373387 FLGP20930 4061 aaPredicted RBP3.47□□□□□ -1.85
GARNL3-202ENST00000373387 M0R2T5 61 aa3.43□□□□□ -1.86
GARNL3-202ENST00000373387 HERC1Q15751 4861 aa3.39□□□□□ -1.87
GARNL3-202ENST00000373387 LCE2AQ5TA79 106 aaPredicted RBP3.38□□□□□ -1.87
GARNL3-202ENST00000373387 BIRC6Q9NR09 4857 aa3.38□□□□□ -1.87
GARNL3-202ENST00000373387 PLAC4Q8WY50 150 aa3.37□□□□□ -1.87
GARNL3-202ENST00000373387 HERC2O95714 4834 aa3.37□□□□□ -1.87
GARNL3-202ENST00000373387 PP632Q6XCG6 107 aa3.36□□□□□ -1.87
GARNL3-202ENST00000373387 PCLOQ9Y6V0 5065 aa3.33□□□□□ -1.88
GARNL3-202ENST00000373387 CAMK2N1Q7Z7J9 78 aa3.32□□□□□ -1.88
GARNL3-202ENST00000373387 MUC2Q02817 5179 aa3.32□□□□□ -1.88
GARNL3-202ENST00000373387 KRTAP23-1A1A580 65 aa3.28□□□□□ -1.88
GARNL3-202ENST00000373387 SPRR5A0A1B0GTR4 108 aa3.25□□□□□ -1.89
GARNL3-202ENST00000373387 HMCN2Q8NDA2 5059 aa3.24□□□□□ -1.89
GARNL3-202ENST00000373387 LUZP6Q538Z0 58 aa3.24□□□□□ -1.89
GARNL3-202ENST00000373387 TNP1P09430 55 aa3.23□□□□□ -1.89
GARNL3-202ENST00000373387 SPRR2GQ9BYE4 73 aa3.2□□□□□ -1.9
GARNL3-202ENST00000373387 KRTAP19-1Q8IUB9 90 aa3.18□□□□□ -1.9
GARNL3-202ENST00000373387 FAT4Q6V0I7 4981 aa3.16□□□□□ -1.9
GARNL3-202ENST00000373387 UBR4Q5T4S7 5183 aa3.11□□□□□ -1.91
GARNL3-202ENST00000373387 RNF213Q63HN8 5207 aa3.1□□□□□ -1.91
GARNL3-202ENST00000373387 KRTAP10-10P60014 251 aa3.09□□□□□ -1.91
GARNL3-202ENST00000373387 MT1HP80294 61 aa3.08□□□□□ -1.92
GARNL3-202ENST00000373387 MT1FP04733 61 aa3.06□□□□□ -1.92
GARNL3-202ENST00000373387 KRTAP19-8Q3LI54 63 aa3.06□□□□□ -1.92
GARNL3-202ENST00000373387 KRTAP9-8Q9BYQ0 159 aa3.06□□□□□ -1.92
GARNL3-202ENST00000373387 MT2AP02795 61 aa3.05□□□□□ -1.92
GARNL3-202ENST00000373387 LCE3AQ5TA76 89 aa3.05□□□□□ -1.92
GARNL3-202ENST00000373387 LOC100996750A0A140TA64 210 aa3.05□□□□□ -1.92
GARNL3-202ENST00000373387 KRTAP4-6Q9BYQ5 205 aa3.05□□□□□ -1.92
GARNL3-202ENST00000373387 KRTAP8-1Q8IUC2 63 aa3.03□□□□□ -1.92
GARNL3-202ENST00000373387 KRTAP10-5P60370 271 aa3.01□□□□□ -1.93
GARNL3-202ENST00000373387 MT1BP07438 61 aa3.01□□□□□ -1.93
GARNL3-202ENST00000373387 MT1XP80297 61 aa3□□□□□ -1.93
GARNL3-202ENST00000373387 KRTAP9-3Q9BYQ3 159 aa2.93□□□□□ -1.94
GARNL3-202ENST00000373387 KRTAP10-12P60413 245 aa2.91□□□□□ -1.94
GARNL3-202ENST00000373387 KRTAP12-3P60328 96 aa2.89□□□□□ -1.95
GARNL3-202ENST00000373387 KRTAP10-7P60409 375 aaPredicted RBP2.89□□□□□ -1.95
GARNL3-202ENST00000373387 INE1O15225 51 aa2.85□□□□□ -1.95
GARNL3-202ENST00000373387 PRO2289Q9P1D8 64 aa2.85□□□□□ -1.95
GARNL3-202ENST00000373387 FSIP2Q5CZC0 6907 aa2.82□□□□□ -1.96
GARNL3-202ENST00000373387 KRTAP19-5Q3LI72 72 aa2.76□□□□□ -1.97
GARNL3-202ENST00000373387 LCE3CQ5T5A8 94 aa2.75□□□□□ -1.97
GARNL3-202ENST00000373387 KRTAP9-6A8MVA2 160 aa2.71□□□□□ -1.98
GARNL3-202ENST00000373387 KMT2DO14686 5537 aa2.7□□□□□ -1.98
GARNL3-202ENST00000373387 USH2AO75445 5202 aa2.69□□□□□ -1.98
GARNL3-202ENST00000373387 KRTAP19-7Q3SYF9 63 aa2.68□□□□□ -1.98
GARNL3-202ENST00000373387 KRTAP4-8A0A0G2JLE6 195 aa2.67□□□□□ -1.98
GARNL3-202ENST00000373387 KRTAP4-8Q9BYQ9 185 aa2.67□□□□□ -1.98
GARNL3-202ENST00000373387 KRTAP2-3P0C7H8 128 aa2.66□□□□□ -1.98
GARNL3-202ENST00000373387 KRTAP2-4Q9BYR9 128 aa2.66□□□□□ -1.98
GARNL3-202ENST00000373387 KRTAP2-1Q9BYU5 128 aa2.66□□□□□ -1.98
GARNL3-202ENST00000373387 KRTAP19-4Q3LI73 84 aa2.62□□□□□ -1.99
GARNL3-202ENST00000373387 SSPOA2VEC9 5147 aa2.61□□□□□ -1.99
GARNL3-202ENST00000373387 MT1LQ93083 61 aa2.59□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms