RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 INE1O15225 51 aa3.35□□□□□ -1.87
CHD6-203ENST00000373233 DNAH2Q9P225 4427 aa3.33□□□□□ -1.88
CHD6-203ENST00000373233 KRTAP10-4P60372 401 aaPredicted RBP3.33□□□□□ -1.88
CHD6-203ENST00000373233 PLECQ15149 4684 aaKnown RBP3.32□□□□□ -1.88
CHD6-203ENST00000373233 DNAH17Q9UFH2 4485 aa3.31□□□□□ -1.88
CHD6-203ENST00000373233 FRAS1Q86XX4 4008 aa3.3□□□□□ -1.88
CHD6-203ENST00000373233 PRO2289Q9P1D8 64 aa3.3□□□□□ -1.88
CHD6-203ENST00000373233 KRTAP13-4Q3LI77 160 aa3.28□□□□□ -1.88
CHD6-203ENST00000373233 DNAH10Q8IVF4 4471 aa3.28□□□□□ -1.88
CHD6-203ENST00000373233 DNHD1Q96M86 4753 aa3.26□□□□□ -1.89
CHD6-203ENST00000373233 KRTAP12-1P59990 96 aa3.25□□□□□ -1.89
CHD6-203ENST00000373233 MT1HL1P0DM35 61 aa3.24□□□□□ -1.89
CHD6-203ENST00000373233 VPS13BQ7Z7G8 4022 aa3.23□□□□□ -1.89
CHD6-203ENST00000373233 DNAH11Q96DT5 4516 aa3.22□□□□□ -1.89
CHD6-203ENST00000373233 KRTAP4-5Q9BYR2 181 aa3.21□□□□□ -1.9
CHD6-203ENST00000373233 FAT2Q9NYQ8 4349 aa3.21□□□□□ -1.9
CHD6-203ENST00000373233 DNAH8Q96JB1 4490 aa3.17□□□□□ -1.9
CHD6-203ENST00000373233 PKD1P98161 4303 aa3.15□□□□□ -1.91
CHD6-203ENST00000373233 KRTAP3-1Q9BYR8 98 aa3.13□□□□□ -1.91
CHD6-203ENST00000373233 DNAH5Q8TE73 4624 aa3.13□□□□□ -1.91
CHD6-203ENST00000373233 PKHD1L1Q86WI1 4243 aa3.13□□□□□ -1.91
CHD6-203ENST00000373233 KRTAP10-10P60014 251 aa3.12□□□□□ -1.91
CHD6-203ENST00000373233 KRTAP10-6P60371 365 aaPredicted RBP3.12□□□□□ -1.91
CHD6-203ENST00000373233 KRTAP23-1A1A580 65 aa3.12□□□□□ -1.91
CHD6-203ENST00000373233 DYNC1H1Q14204 4646 aaKnown RBP3.1□□□□□ -1.91
CHD6-203ENST00000373233 PKHD1P08F94 4074 aa3.08□□□□□ -1.92
CHD6-203ENST00000373233 LRP1BQ9NZR2 4599 aa3.05□□□□□ -1.92
CHD6-203ENST00000373233 KRTAP17-1Q9BYP8 105 aa3.04□□□□□ -1.92
CHD6-203ENST00000373233 KRTAP3-2Q9BYR7 98 aa3.01□□□□□ -1.93
CHD6-203ENST00000373233 KRTAP3-3Q9BYR6 98 aa3□□□□□ -1.93
CHD6-203ENST00000373233 SACSQ9NZJ4 4579 aa2.99□□□□□ -1.93
CHD6-203ENST00000373233 APOBP04114 4563 aaKnown RBP2.99□□□□□ -1.93
CHD6-203ENST00000373233 HYDINQ4G0P3 5121 aa2.98□□□□□ -1.93
CHD6-203ENST00000373233 RYR2Q92736 4967 aa2.98□□□□□ -1.93
CHD6-203ENST00000373233 RYR3Q15413 4870 aa2.94□□□□□ -1.94
CHD6-203ENST00000373233 KRTAP4-1Q9BYQ7 146 aa2.92□□□□□ -1.94
CHD6-203ENST00000373233 TNXBP22105 4242 aa2.91□□□□□ -1.94
CHD6-203ENST00000373233 FAT1Q14517 4588 aa2.91□□□□□ -1.94
CHD6-203ENST00000373233 HSPG2P98160 4391 aa2.9□□□□□ -1.94
CHD6-203ENST00000373233 RYR1P21817 5038 aa2.9□□□□□ -1.94
CHD6-203ENST00000373233 FLGP20930 4061 aaPredicted RBP2.88□□□□□ -1.95
CHD6-203ENST00000373233 LRP1Q07954 4544 aaKnown RBP2.85□□□□□ -1.95
CHD6-203ENST00000373233 KRTAP10-12P60413 245 aa2.84□□□□□ -1.95
CHD6-203ENST00000373233 CRCT1Q9UGL9 99 aa2.84□□□□□ -1.96
CHD6-203ENST00000373233 KIAA1109Q2LD37 5005 aa2.84□□□□□ -1.96
CHD6-203ENST00000373233 FAT3Q8TDW7 4589 aa2.82□□□□□ -1.96
CHD6-203ENST00000373233 KRTAP12-3P60328 96 aa2.82□□□□□ -1.96
CHD6-203ENST00000373233 MYCBP2O75592 4640 aa2.79□□□□□ -1.96
CHD6-203ENST00000373233 LORP23490 312 aaPredicted RBP2.78□□□□□ -1.96
CHD6-203ENST00000373233 KMT2CQ8NEZ4 4911 aaKnown RBP2.78□□□□□ -1.96
CHD6-203ENST00000373233 MT1HP80294 61 aa2.76□□□□□ -1.97
CHD6-203ENST00000373233 LCE3AQ5TA76 89 aa2.75□□□□□ -1.97
CHD6-203ENST00000373233 BIRC6Q9NR09 4857 aa2.73□□□□□ -1.97
CHD6-203ENST00000373233 KRTAP10-5P60370 271 aa2.71□□□□□ -1.98
CHD6-203ENST00000373233 MT2AP02795 61 aa2.7□□□□□ -1.98
CHD6-203ENST00000373233 MT1FP04733 61 aa2.67□□□□□ -1.98
CHD6-203ENST00000373233 PCLOQ9Y6V0 5065 aa2.67□□□□□ -1.98
CHD6-203ENST00000373233 SPRR2GQ9BYE4 73 aa2.66□□□□□ -1.98
CHD6-203ENST00000373233 HERC2O95714 4834 aa2.65□□□□□ -1.98
CHD6-203ENST00000373233 ABCA13Q86UQ4 5058 aa2.64□□□□□ -1.99
CHD6-203ENST00000373233 EPPK1P58107 5090 aaKnown RBP2.64□□□□□ -1.99
CHD6-203ENST00000373233 LCE2CQ5TA81 110 aa2.64□□□□□ -1.99
CHD6-203ENST00000373233 LRP2P98164 4655 aa2.63□□□□□ -1.99
CHD6-203ENST00000373233 KRTAP19-2Q3LHN2 52 aa2.62□□□□□ -1.99
CHD6-203ENST00000373233 MUC17Q685J3 4493 aa2.61□□□□□ -1.99
CHD6-203ENST00000373233 HERC1Q15751 4861 aa2.59□□□□□ -1.99
CHD6-203ENST00000373233 LPAP08519 4548 aa2.58□□□□□ -2
CHD6-203ENST00000373233 KRTAP19-1Q8IUB9 90 aa2.55□□□□□ -2
CHD6-203ENST00000373233 KRTAP9-8Q9BYQ0 159 aa2.54□□□□□ -2
CHD6-203ENST00000373233 KRTAP19-8Q3LI54 63 aa2.53□□□□□ -2
CHD6-203ENST00000373233 RNF213Q63HN8 5207 aa2.53□□□□□ -2
CHD6-203ENST00000373233 SPRR5A0A1B0GTR4 108 aa2.51□□□□□ -2.01
CHD6-203ENST00000373233 KRTAP8-1Q8IUC2 63 aa2.5□□□□□ -2.01
CHD6-203ENST00000373233 KRTAP9-3Q9BYQ3 159 aa2.5□□□□□ -2.01
CHD6-203ENST00000373233 KRTAP19-4Q3LI73 84 aa2.49□□□□□ -2.01
CHD6-203ENST00000373233 LCE3CQ5T5A8 94 aa2.48□□□□□ -2.01
CHD6-203ENST00000373233 MT1XP80297 61 aa2.47□□□□□ -2.01
CHD6-203ENST00000373233 MT1BP07438 61 aa2.47□□□□□ -2.01
CHD6-203ENST00000373233 KRTAP10-7P60409 375 aaPredicted RBP2.42□□□□□ -2.02
CHD6-203ENST00000373233 KRTAP12-4P60329 112 aa2.41□□□□□ -2.02
CHD6-203ENST00000373233 KRTAP19-5Q3LI72 72 aa2.41□□□□□ -2.02
CHD6-203ENST00000373233 MT3P25713 68 aa2.39□□□□□ -2.03
CHD6-203ENST00000373233 LCE2BO14633 110 aa2.39□□□□□ -2.03
CHD6-203ENST00000373233 LCE2AQ5TA79 106 aaPredicted RBP2.37□□□□□ -2.03
CHD6-203ENST00000373233 UBR4Q5T4S7 5183 aa2.34□□□□□ -2.03
CHD6-203ENST00000373233 HMCN2Q8NDA2 5059 aa2.34□□□□□ -2.04
CHD6-203ENST00000373233 SPRR2FQ96RM1 72 aa2.31□□□□□ -2.04
CHD6-203ENST00000373233 LCE3BQ5TA77 95 aa2.29□□□□□ -2.04
CHD6-203ENST00000373233 FAT4Q6V0I7 4981 aa2.28□□□□□ -2.05
CHD6-203ENST00000373233 KRTAP4-8A0A0G2JLE6 195 aa2.26□□□□□ -2.05
CHD6-203ENST00000373233 KRTAP4-8Q9BYQ9 185 aa2.26□□□□□ -2.05
CHD6-203ENST00000373233 MUC2Q02817 5179 aa2.25□□□□□ -2.05
CHD6-203ENST00000373233 LCE2DQ5TA82 110 aaPredicted RBP2.25□□□□□ -2.05
CHD6-203ENST00000373233 KRTAP19-6Q3LI70 58 aa2.24□□□□□ -2.05
CHD6-203ENST00000373233 KRTAP9-2Q9BYQ4 174 aa2.21□□□□□ -2.06
CHD6-203ENST00000373233 MT1EP04732 61 aa2.18□□□□□ -2.06
CHD6-203ENST00000373233 SPRR2EP22531 72 aa2.18□□□□□ -2.06
CHD6-203ENST00000373233 SPRR2BP35325 72 aa2.18□□□□□ -2.06
CHD6-203ENST00000373233 SPRR2AP35326 72 aa2.18□□□□□ -2.06
CHD6-203ENST00000373233 MT1LQ93083 61 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms