RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 CYP4F30PQ9H0H9 118 aa5.54□□□□□ -1.52
TRAPPC3-201ENST00000373159 KRTAP2-2Q9BYT5 123 aa5.53□□□□□ -1.52
TRAPPC3-201ENST00000373159 KRTAP2-1Q9BYU5 128 aa5.53□□□□□ -1.52
TRAPPC3-201ENST00000373159 PRO2289Q9P1D8 64 aa5.53□□□□□ -1.52
TRAPPC3-201ENST00000373159 H0YAA0 97 aa5.52□□□□□ -1.53
TRAPPC3-201ENST00000373159 LOC100996750A0A140TA64 210 aa5.51□□□□□ -1.53
TRAPPC3-201ENST00000373159 KRTAP4-6Q9BYQ5 205 aa5.51□□□□□ -1.53
TRAPPC3-201ENST00000373159 SMIM6P0DI80 62 aa5.49□□□□□ -1.53
TRAPPC3-201ENST00000373159 MT1XP80297 61 aa5.49□□□□□ -1.53
TRAPPC3-201ENST00000373159 LCE1AQ5T7P2 110 aa5.49□□□□□ -1.53
TRAPPC3-201ENST00000373159 KRTAP8-1Q8IUC2 63 aa5.49□□□□□ -1.53
TRAPPC3-201ENST00000373159 NDUFC1O43677 76 aa5.47□□□□□ -1.53
TRAPPC3-201ENST00000373159 SPCS1Q9Y6A9 102 aa5.47□□□□□ -1.53
TRAPPC3-201ENST00000373159 A8MUN3 132 aa5.45□□□□□ -1.54
TRAPPC3-201ENST00000373159 LOC101927531A0A1B0GV80 90 aa5.44□□□□□ -1.54
TRAPPC3-201ENST00000373159 KRTAP12-2P59991 146 aa5.44□□□□□ -1.54
TRAPPC3-201ENST00000373159 PLAC4Q8WY50 150 aa5.43□□□□□ -1.54
TRAPPC3-201ENST00000373159 TRAV22A0A0B4J277 110 aa5.42□□□□□ -1.54
TRAPPC3-201ENST00000373159 ADM2Q7Z4H4 148 aa5.42□□□□□ -1.54
TRAPPC3-201ENST00000373159 PRO0461Q9UI25 63 aa5.42□□□□□ -1.54
TRAPPC3-201ENST00000373159 SPRR2DP22532 72 aa5.4□□□□□ -1.54
TRAPPC3-201ENST00000373159 K7EP34 96 aa5.39□□□□□ -1.55
TRAPPC3-201ENST00000373159 KRTAP4-8A0A0G2JLE6 195 aa5.35□□□□□ -1.55
TRAPPC3-201ENST00000373159 ACYP1P07311 99 aa5.35□□□□□ -1.55
TRAPPC3-201ENST00000373159 KRTAP4-8Q9BYQ9 185 aa5.35□□□□□ -1.55
TRAPPC3-201ENST00000373159 GPR98Q8WXG9 6306 aa5.32□□□□□ -1.56
TRAPPC3-201ENST00000373159 ATOX1O00244 68 aa5.31□□□□□ -1.56
TRAPPC3-201ENST00000373159 R4GN34 69 aa5.31□□□□□ -1.56
TRAPPC3-201ENST00000373159 UQCRQO14949 82 aa5.3□□□□□ -1.56
TRAPPC3-201ENST00000373159 LCE3BQ5TA77 95 aa5.29□□□□□ -1.56
TRAPPC3-201ENST00000373159 H0Y9P7 68 aa5.28□□□□□ -1.56
TRAPPC3-201ENST00000373159 COL5A1-AS1Q5SY13 56 aa5.27□□□□□ -1.57
TRAPPC3-201ENST00000373159 P0C880 135 aa5.26□□□□□ -1.57
TRAPPC3-201ENST00000373159 C20orf197Q8N268 126 aa5.25□□□□□ -1.57
TRAPPC3-201ENST00000373159 F8W1H4 67 aa5.24□□□□□ -1.57
TRAPPC3-201ENST00000373159 M0QZ58 72 aa5.24□□□□□ -1.57
TRAPPC3-201ENST00000373159 ETDBQ3ZM63 59 aa5.24□□□□□ -1.57
TRAPPC3-201ENST00000373159 KRTAP10-7P60409 375 aaPredicted RBP5.23□□□□□ -1.57
TRAPPC3-201ENST00000373159 KRTAP10-12P60413 245 aa5.23□□□□□ -1.57
TRAPPC3-201ENST00000373159 DSTQ03001 7570 aaKnown RBP5.21□□□□□ -1.57
TRAPPC3-201ENST00000373159 GTF2H5Q6ZYL4 71 aa5.2□□□□□ -1.58
TRAPPC3-201ENST00000373159 LOC105371267A0A1B0GV96 52 aa5.18□□□□□ -1.58
TRAPPC3-201ENST00000373159 HIST1H4AP62805 103 aaKnown RBP5.18□□□□□ -1.58
TRAPPC3-201ENST00000373159 LINC01554Q52M75 96 aa5.18□□□□□ -1.58
TRAPPC3-201ENST00000373159 ATP5EP2Q5VTU8 51 aa5.18□□□□□ -1.58
TRAPPC3-201ENST00000373159 LINC00208Q96KT6 92 aa5.18□□□□□ -1.58
TRAPPC3-201ENST00000373159 FAM240AA0A1B0GVK7 77 aa5.11□□□□□ -1.59
TRAPPC3-201ENST00000373159 MP68P56378 58 aa5.11□□□□□ -1.59
TRAPPC3-201ENST00000373159 DMAC1Q96GE9 116 aa5.07□□□□□ -1.6
TRAPPC3-201ENST00000373159 OCR1Q9BZK8 76 aa5.07□□□□□ -1.6
TRAPPC3-201ENST00000373159 MT-ATP8P03928 68 aa5.02□□□□□ -1.61
TRAPPC3-201ENST00000373159 LINC00643Q86TS7 51 aa5.02□□□□□ -1.61
TRAPPC3-201ENST00000373159 H3BPC8 53 aa5.01□□□□□ -1.61
TRAPPC3-201ENST00000373159 KRTAP4-9Q9BYQ8 210 aa4.99□□□□□ -1.61
TRAPPC3-201ENST00000373159 LCE5AQ5TCM9 118 aa4.98□□□□□ -1.61
TRAPPC3-201ENST00000373159 TRAV7A0A075B6U4 112 aa4.97□□□□□ -1.61
TRAPPC3-201ENST00000373159 KRTAP19-7Q3SYF9 63 aa4.92□□□□□ -1.62
TRAPPC3-201ENST00000373159 KRTAP19-3Q7Z4W3 81 aa4.91□□□□□ -1.62
TRAPPC3-201ENST00000373159 ACYP2P14621 99 aa4.9□□□□□ -1.63
TRAPPC3-201ENST00000373159 SPTSSBQ8NFR3 76 aa4.9□□□□□ -1.63
TRAPPC3-201ENST00000373159 MT1EP04732 61 aa4.89□□□□□ -1.63
TRAPPC3-201ENST00000373159 HMCN1Q96RW7 5635 aa4.88□□□□□ -1.63
TRAPPC3-201ENST00000373159 PCP4L1A6NKN8 68 aa4.86□□□□□ -1.63
TRAPPC3-201ENST00000373159 LCE1DQ5T752 114 aa4.85□□□□□ -1.63
TRAPPC3-201ENST00000373159 SCGB1A1P11684 91 aa4.84□□□□□ -1.63
TRAPPC3-201ENST00000373159 CAMK2N1Q7Z7J9 78 aa4.83□□□□□ -1.64
TRAPPC3-201ENST00000373159 CYSTM1Q9H1C7 97 aa4.81□□□□□ -1.64
TRAPPC3-201ENST00000373159 AHNAK2Q8IVF2 5795 aa4.8□□□□□ -1.64
TRAPPC3-201ENST00000373159 KRTAP13-4Q3LI77 160 aa4.79□□□□□ -1.64
TRAPPC3-201ENST00000373159 CHKB-CPT1BH3BT56 60 aa4.78□□□□□ -1.64
TRAPPC3-201ENST00000373159 MT1GP13640 62 aa4.78□□□□□ -1.64
TRAPPC3-201ENST00000373159 LCE4AQ5TA78 99 aa4.78□□□□□ -1.64
TRAPPC3-201ENST00000373159 MT4P47944 62 aa4.75□□□□□ -1.65
TRAPPC3-201ENST00000373159 PP632Q6XCG6 107 aa4.73□□□□□ -1.65
TRAPPC3-201ENST00000373159 A0A0D9SG42 100 aa4.71□□□□□ -1.66
TRAPPC3-201ENST00000373159 KRTAP19-5Q3LI72 72 aa4.71□□□□□ -1.66
TRAPPC3-201ENST00000373159 MT1MQ8N339 61 aa4.67□□□□□ -1.66
TRAPPC3-201ENST00000373159 KRTAP5-10Q6L8G5 202 aa4.66□□□□□ -1.66
TRAPPC3-201ENST00000373159 J3QR89 54 aa4.65□□□□□ -1.67
TRAPPC3-201ENST00000373159 KRTAP5-4Q6L8H1 288 aa4.65□□□□□ -1.67
TRAPPC3-201ENST00000373159 SMIM20Q8N5G0 67 aa4.65□□□□□ -1.67
TRAPPC3-201ENST00000373159 MT1LQ93083 61 aa4.63□□□□□ -1.67
TRAPPC3-201ENST00000373159 SPANXA2-OT1Q8N9U9 137 aa4.59□□□□□ -1.67
TRAPPC3-201ENST00000373159 A0A1B0GV90 55 aa4.58□□□□□ -1.68
TRAPPC3-201ENST00000373159 KRTAP4-3Q9BYR4 195 aa4.57□□□□□ -1.68
TRAPPC3-201ENST00000373159 SNURFQ9Y675 71 aa4.57□□□□□ -1.68
TRAPPC3-201ENST00000373159 SPINT4Q6UDR6 99 aa4.56□□□□□ -1.68
TRAPPC3-201ENST00000373159 KRTAP5-7Q6L8G8 165 aa4.53□□□□□ -1.68
TRAPPC3-201ENST00000373159 SPATA8Q6RVD6 105 aa4.53□□□□□ -1.68
TRAPPC3-201ENST00000373159 KRTAP9-9Q9BYP9 154 aa4.52□□□□□ -1.69
TRAPPC3-201ENST00000373159 KRTAP9-4Q9BYQ2 154 aa4.52□□□□□ -1.69
TRAPPC3-201ENST00000373159 KRTAP12-1P59990 96 aa4.51□□□□□ -1.69
TRAPPC3-201ENST00000373159 SEC61GP60059 68 aa4.51□□□□□ -1.69
TRAPPC3-201ENST00000373159 SERP1Q9Y6X1 66 aa4.51□□□□□ -1.69
TRAPPC3-201ENST00000373159 KRTAP5-3Q6L8H2 238 aa4.49□□□□□ -1.69
TRAPPC3-201ENST00000373159 A0A1B0GU33 70 aa4.48□□□□□ -1.69
TRAPPC3-201ENST00000373159 C10orf95Q9H7T3 257 aa4.48□□□□□ -1.69
TRAPPC3-201ENST00000373159 LCE3AQ5TA76 89 aa4.45□□□□□ -1.7
TRAPPC3-201ENST00000373159 COA5Q86WW8 74 aa4.45□□□□□ -1.7
TRAPPC3-201ENST00000373159 KRTAP4-7Q9BYR0 210 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms