RNA–Protein interactions for RNA: ENST00000372857.7

PABPC4-202, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 1 (best) BASIC

Gene PABPC4, Length 3,048 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-202ENST00000372857 LRP1Q07954 4544 aaKnown RBP8.37□□□□□ -1.07
PABPC4-202ENST00000372857 RPS29P62273 56 aaKnown RBP8.34□□□□□ -1.07
PABPC4-202ENST00000372857 MYCBP2O75592 4640 aa8.32□□□□□ -1.08
PABPC4-202ENST00000372857 A0A0D9SG42 100 aa8.3□□□□□ -1.08
PABPC4-202ENST00000372857 RYR2Q92736 4967 aa8.28□□□□□ -1.08
PABPC4-202ENST00000372857 RYR3Q15413 4870 aa8.27□□□□□ -1.09
PABPC4-202ENST00000372857 KRTAP13-4Q3LI77 160 aa8.25□□□□□ -1.09
PABPC4-202ENST00000372857 RPL37P61927 97 aaKnown RBP8.25□□□□□ -1.09
PABPC4-202ENST00000372857 A0A1B0GVY2 172 aa8.24□□□□□ -1.09
PABPC4-202ENST00000372857 TPRXLQ17RH7 258 aa8.22□□□□□ -1.09
PABPC4-202ENST00000372857 KRTAP10-6P60371 365 aaPredicted RBP8.22□□□□□ -1.09
PABPC4-202ENST00000372857 KRTAP10-4P60372 401 aaPredicted RBP8.22□□□□□ -1.09
PABPC4-202ENST00000372857 C10orf95Q9H7T3 257 aa8.2□□□□□ -1.1
PABPC4-202ENST00000372857 PKHD1L1Q86WI1 4243 aa8.2□□□□□ -1.1
PABPC4-202ENST00000372857 KRTAP3-3Q9BYR6 98 aa8.16□□□□□ -1.1
PABPC4-202ENST00000372857 KRTAP3-2Q9BYR7 98 aa8.12□□□□□ -1.11
PABPC4-202ENST00000372857 KIAA1109Q2LD37 5005 aa8.1□□□□□ -1.11
PABPC4-202ENST00000372857 HSPG2P98160 4391 aa8.1□□□□□ -1.11
PABPC4-202ENST00000372857 FAT3Q8TDW7 4589 aa8.08□□□□□ -1.12
PABPC4-202ENST00000372857 KRTAP15-1Q3LI76 137 aa8.07□□□□□ -1.12
PABPC4-202ENST00000372857 KRTAP17-1Q9BYP8 105 aa8.05□□□□□ -1.12
PABPC4-202ENST00000372857 Q5VSD8 79 aa8.05□□□□□ -1.12
PABPC4-202ENST00000372857 KRTAP10-8P60410 259 aa8.04□□□□□ -1.12
PABPC4-202ENST00000372857 LUZP6Q538Z0 58 aa8.03□□□□□ -1.12
PABPC4-202ENST00000372857 S4R3F8 94 aa8.03□□□□□ -1.12
PABPC4-202ENST00000372857 KRTAP12-2P59991 146 aa8.01□□□□□ -1.13
PABPC4-202ENST00000372857 TNXBP22105 4242 aa8.01□□□□□ -1.13
PABPC4-202ENST00000372857 EPPK1P58107 5090 aaKnown RBP7.99□□□□□ -1.13
PABPC4-202ENST00000372857 LPAP08519 4548 aa7.96□□□□□ -1.13
PABPC4-202ENST00000372857 RYR1P21817 5038 aa7.92□□□□□ -1.14
PABPC4-202ENST00000372857 KRTAP12-1P59990 96 aa7.89□□□□□ -1.15
PABPC4-202ENST00000372857 LRP2P98164 4655 aa7.87□□□□□ -1.15
PABPC4-202ENST00000372857 XP32Q5T750 250 aa7.85□□□□□ -1.15
PABPC4-202ENST00000372857 SEC61BP60468 96 aaKnown RBP7.81□□□□□ -1.16
PABPC4-202ENST00000372857 LCE2DQ5TA82 110 aaPredicted RBP7.8□□□□□ -1.16
PABPC4-202ENST00000372857 ABCA13Q86UQ4 5058 aa7.79□□□□□ -1.16
PABPC4-202ENST00000372857 MT1HL1P0DM35 61 aa7.73□□□□□ -1.17
PABPC4-202ENST00000372857 KRTAP4-5Q9BYR2 181 aa7.7□□□□□ -1.18
PABPC4-202ENST00000372857 M0QZ58 72 aa7.66□□□□□ -1.18
PABPC4-202ENST00000372857 BIRC6Q9NR09 4857 aa7.63□□□□□ -1.19
PABPC4-202ENST00000372857 MUC2Q02817 5179 aa7.52□□□□□ -1.21
PABPC4-202ENST00000372857 PLAC4Q8WY50 150 aa7.52□□□□□ -1.21
PABPC4-202ENST00000372857 R4GN34 69 aa7.51□□□□□ -1.21
PABPC4-202ENST00000372857 HERC2O95714 4834 aa7.47□□□□□ -1.21
PABPC4-202ENST00000372857 PCLOQ9Y6V0 5065 aa7.44□□□□□ -1.22
PABPC4-202ENST00000372857 LORP23490 312 aaPredicted RBP7.41□□□□□ -1.22
PABPC4-202ENST00000372857 KRTAP4-1Q9BYQ7 146 aa7.32□□□□□ -1.24
PABPC4-202ENST00000372857 LCE2CQ5TA81 110 aa7.3□□□□□ -1.24
PABPC4-202ENST00000372857 HERC1Q15751 4861 aa7.24□□□□□ -1.25
PABPC4-202ENST00000372857 MUC17Q685J3 4493 aa7.24□□□□□ -1.25
PABPC4-202ENST00000372857 LCE2AQ5TA79 106 aaPredicted RBP7.21□□□□□ -1.25
PABPC4-202ENST00000372857 CAMK2N1Q7Z7J9 78 aa7.2□□□□□ -1.26
PABPC4-202ENST00000372857 KRTAP23-1A1A580 65 aa7.19□□□□□ -1.26
PABPC4-202ENST00000372857 LCE2BO14633 110 aa7.14□□□□□ -1.27
PABPC4-202ENST00000372857 FAT4Q6V0I7 4981 aa7.14□□□□□ -1.27
PABPC4-202ENST00000372857 PP632Q6XCG6 107 aa7.13□□□□□ -1.27
PABPC4-202ENST00000372857 RNF213Q63HN8 5207 aa7.03□□□□□ -1.28
PABPC4-202ENST00000372857 KRTAP19-2Q3LHN2 52 aa6.96□□□□□ -1.29
PABPC4-202ENST00000372857 TNP1P09430 55 aa6.91□□□□□ -1.3
PABPC4-202ENST00000372857 HMCN2Q8NDA2 5059 aa6.9□□□□□ -1.31
PABPC4-202ENST00000372857 UBR4Q5T4S7 5183 aa6.89□□□□□ -1.31
PABPC4-202ENST00000372857 FLGP20930 4061 aaPredicted RBP6.85□□□□□ -1.31
PABPC4-202ENST00000372857 SPRR5A0A1B0GTR4 108 aa6.8□□□□□ -1.32
PABPC4-202ENST00000372857 PRO2289Q9P1D8 64 aa6.79□□□□□ -1.32
PABPC4-202ENST00000372857 M0R2T5 61 aa6.73□□□□□ -1.33
PABPC4-202ENST00000372857 LCE3AQ5TA76 89 aa6.56□□□□□ -1.36
PABPC4-202ENST00000372857 MT1HP80294 61 aa6.49□□□□□ -1.37
PABPC4-202ENST00000372857 KRTAP10-10P60014 251 aa6.48□□□□□ -1.37
PABPC4-202ENST00000372857 KRTAP19-1Q8IUB9 90 aa6.47□□□□□ -1.37
PABPC4-202ENST00000372857 SPRR2GQ9BYE4 73 aa6.46□□□□□ -1.38
PABPC4-202ENST00000372857 INE1O15225 51 aa6.44□□□□□ -1.38
PABPC4-202ENST00000372857 MT1FP04733 61 aa6.43□□□□□ -1.38
PABPC4-202ENST00000372857 MT2AP02795 61 aa6.38□□□□□ -1.39
PABPC4-202ENST00000372857 USH2AO75445 5202 aa6.31□□□□□ -1.4
PABPC4-202ENST00000372857 KRTAP9-8Q9BYQ0 159 aa6.31□□□□□ -1.4
PABPC4-202ENST00000372857 KRTAP8-1Q8IUC2 63 aa6.28□□□□□ -1.4
PABPC4-202ENST00000372857 KRTAP12-3P60328 96 aa6.19□□□□□ -1.42
PABPC4-202ENST00000372857 KRTAP10-5P60370 271 aa6.15□□□□□ -1.42
PABPC4-202ENST00000372857 KRTAP10-12P60413 245 aa6.13□□□□□ -1.43
PABPC4-202ENST00000372857 MT1XP80297 61 aa6.13□□□□□ -1.43
PABPC4-202ENST00000372857 MT1BP07438 61 aa6.13□□□□□ -1.43
PABPC4-202ENST00000372857 KMT2DO14686 5537 aa6.13□□□□□ -1.43
PABPC4-202ENST00000372857 KRTAP19-8Q3LI54 63 aa6.09□□□□□ -1.44
PABPC4-202ENST00000372857 KRTAP10-7P60409 375 aaPredicted RBP6.06□□□□□ -1.44
PABPC4-202ENST00000372857 FSIP2Q5CZC0 6907 aa6.02□□□□□ -1.45
PABPC4-202ENST00000372857 KRTAP9-3Q9BYQ3 159 aa6.01□□□□□ -1.45
PABPC4-202ENST00000372857 KRTAP19-5Q3LI72 72 aa5.85□□□□□ -1.47
PABPC4-202ENST00000372857 LCE3CQ5T5A8 94 aa5.83□□□□□ -1.48
PABPC4-202ENST00000372857 KRTAP4-8A0A0G2JLE6 195 aa5.78□□□□□ -1.48
PABPC4-202ENST00000372857 KRTAP4-8Q9BYQ9 185 aa5.78□□□□□ -1.48
PABPC4-202ENST00000372857 KRTAP9-6A8MVA2 160 aa5.73□□□□□ -1.49
PABPC4-202ENST00000372857 KRTAP4-7Q9BYR0 210 aa5.61□□□□□ -1.51
PABPC4-202ENST00000372857 SSPOA2VEC9 5147 aa5.59□□□□□ -1.52
PABPC4-202ENST00000372857 KRTAP9-2Q9BYQ4 174 aa5.57□□□□□ -1.52
PABPC4-202ENST00000372857 KRTAP2-3P0C7H8 128 aa5.54□□□□□ -1.52
PABPC4-202ENST00000372857 KRTAP2-4Q9BYR9 128 aa5.54□□□□□ -1.52
PABPC4-202ENST00000372857 KRTAP2-1Q9BYU5 128 aa5.54□□□□□ -1.52
PABPC4-202ENST00000372857 KRTAP19-7Q3SYF9 63 aa5.46□□□□□ -1.54
PABPC4-202ENST00000372857 MUC12Q9UKN1 5478 aa5.39□□□□□ -1.55
PABPC4-202ENST00000372857 FCGBPQ9Y6R7 5405 aaPredicted RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms