RNA–Protein interactions for RNA: ENST00000372595.5

SCMH1-205, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SCMH1, Length 3,231 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-205ENST00000372595 RYR2Q92736 4967 aa4.72□□□□□ -1.65
SCMH1-205ENST00000372595 A0A1B0GU33 70 aa4.72□□□□□ -1.65
SCMH1-205ENST00000372595 SPINT4Q6UDR6 99 aa4.71□□□□□ -1.66
SCMH1-205ENST00000372595 H1FX-AS1Q4G0G2 97 aa4.7□□□□□ -1.66
SCMH1-205ENST00000372595 COX6B2Q6YFQ2 88 aa4.7□□□□□ -1.66
SCMH1-205ENST00000372595 KMT2CQ8NEZ4 4911 aaKnown RBP4.7□□□□□ -1.66
SCMH1-205ENST00000372595 LRP1Q07954 4544 aaKnown RBP4.69□□□□□ -1.66
SCMH1-205ENST00000372595 KRTAP10-8P60410 259 aa4.68□□□□□ -1.66
SCMH1-205ENST00000372595 PKHD1L1Q86WI1 4243 aa4.65□□□□□ -1.66
SCMH1-205ENST00000372595 RPL37P61927 97 aaKnown RBP4.63□□□□□ -1.67
SCMH1-205ENST00000372595 MYCBP2O75592 4640 aa4.63□□□□□ -1.67
SCMH1-205ENST00000372595 XP32Q5T750 250 aa4.63□□□□□ -1.67
SCMH1-205ENST00000372595 C10orf95Q9H7T3 257 aa4.63□□□□□ -1.67
SCMH1-205ENST00000372595 FAT3Q8TDW7 4589 aa4.62□□□□□ -1.67
SCMH1-205ENST00000372595 KIAA1109Q2LD37 5005 aa4.59□□□□□ -1.68
SCMH1-205ENST00000372595 K7ERS5 55 aa4.59□□□□□ -1.68
SCMH1-205ENST00000372595 KRTAP17-1Q9BYP8 105 aa4.59□□□□□ -1.68
SCMH1-205ENST00000372595 A0A0D9SG42 100 aa4.57□□□□□ -1.68
SCMH1-205ENST00000372595 S4R3F8 94 aa4.57□□□□□ -1.68
SCMH1-205ENST00000372595 HSPG2P98160 4391 aa4.57□□□□□ -1.68
SCMH1-205ENST00000372595 RYR1P21817 5038 aa4.57□□□□□ -1.68
SCMH1-205ENST00000372595 TNXBP22105 4242 aa4.55□□□□□ -1.68
SCMH1-205ENST00000372595 RYR3Q15413 4870 aa4.55□□□□□ -1.68
SCMH1-205ENST00000372595 MT1HL1P0DM35 61 aa4.53□□□□□ -1.68
SCMH1-205ENST00000372595 KRTAP13-4Q3LI77 160 aa4.53□□□□□ -1.68
SCMH1-205ENST00000372595 KRTAP3-3Q9BYR6 98 aa4.52□□□□□ -1.69
SCMH1-205ENST00000372595 LUZP6Q538Z0 58 aa4.5□□□□□ -1.69
SCMH1-205ENST00000372595 KRTAP10-6P60371 365 aaPredicted RBP4.49□□□□□ -1.69
SCMH1-205ENST00000372595 SEC61BP60468 96 aaKnown RBP4.47□□□□□ -1.69
SCMH1-205ENST00000372595 KRTAP3-2Q9BYR7 98 aa4.46□□□□□ -1.7
SCMH1-205ENST00000372595 LRP2P98164 4655 aa4.43□□□□□ -1.7
SCMH1-205ENST00000372595 KRTAP4-5Q9BYR2 181 aa4.43□□□□□ -1.7
SCMH1-205ENST00000372595 EPPK1P58107 5090 aaKnown RBP4.41□□□□□ -1.7
SCMH1-205ENST00000372595 KRTAP12-2P59991 146 aa4.39□□□□□ -1.71
SCMH1-205ENST00000372595 LPAP08519 4548 aa4.39□□□□□ -1.71
SCMH1-205ENST00000372595 ABCA13Q86UQ4 5058 aa4.34□□□□□ -1.72
SCMH1-205ENST00000372595 KRTAP12-1P59990 96 aa4.31□□□□□ -1.72
SCMH1-205ENST00000372595 M0QZ58 72 aa4.31□□□□□ -1.72
SCMH1-205ENST00000372595 LCE2DQ5TA82 110 aaPredicted RBP4.29□□□□□ -1.72
SCMH1-205ENST00000372595 R4GN34 69 aa4.28□□□□□ -1.72
SCMH1-205ENST00000372595 PLAC4Q8WY50 150 aa4.25□□□□□ -1.73
SCMH1-205ENST00000372595 KRTAP4-1Q9BYQ7 146 aa4.24□□□□□ -1.73
SCMH1-205ENST00000372595 HERC2O95714 4834 aa4.21□□□□□ -1.74
SCMH1-205ENST00000372595 LORP23490 312 aaPredicted RBP4.19□□□□□ -1.74
SCMH1-205ENST00000372595 MUC17Q685J3 4493 aa4.13□□□□□ -1.75
SCMH1-205ENST00000372595 CAMK2N1Q7Z7J9 78 aa4.1□□□□□ -1.75
SCMH1-205ENST00000372595 MUC2Q02817 5179 aa4.09□□□□□ -1.76
SCMH1-205ENST00000372595 BIRC6Q9NR09 4857 aa4.06□□□□□ -1.76
SCMH1-205ENST00000372595 KRTAP23-1A1A580 65 aa4.06□□□□□ -1.76
SCMH1-205ENST00000372595 LCE2CQ5TA81 110 aa4.06□□□□□ -1.76
SCMH1-205ENST00000372595 KRTAP19-2Q3LHN2 52 aa4.05□□□□□ -1.76
SCMH1-205ENST00000372595 LCE2AQ5TA79 106 aaPredicted RBP4.02□□□□□ -1.77
SCMH1-205ENST00000372595 M0R2T5 61 aa3.99□□□□□ -1.77
SCMH1-205ENST00000372595 HERC1Q15751 4861 aa3.99□□□□□ -1.77
SCMH1-205ENST00000372595 SPRR5A0A1B0GTR4 108 aa3.96□□□□□ -1.78
SCMH1-205ENST00000372595 LCE2BO14633 110 aa3.95□□□□□ -1.78
SCMH1-205ENST00000372595 PRO2289Q9P1D8 64 aa3.94□□□□□ -1.78
SCMH1-205ENST00000372595 PCLOQ9Y6V0 5065 aa3.93□□□□□ -1.78
SCMH1-205ENST00000372595 FLGP20930 4061 aaPredicted RBP3.92□□□□□ -1.78
SCMH1-205ENST00000372595 FAT4Q6V0I7 4981 aa3.91□□□□□ -1.78
SCMH1-205ENST00000372595 HMCN2Q8NDA2 5059 aa3.91□□□□□ -1.78
SCMH1-205ENST00000372595 PP632Q6XCG6 107 aa3.91□□□□□ -1.78
SCMH1-205ENST00000372595 TNP1P09430 55 aa3.88□□□□□ -1.79
SCMH1-205ENST00000372595 RNF213Q63HN8 5207 aa3.86□□□□□ -1.79
SCMH1-205ENST00000372595 KRTAP10-10P60014 251 aa3.84□□□□□ -1.79
SCMH1-205ENST00000372595 UBR4Q5T4S7 5183 aa3.8□□□□□ -1.8
SCMH1-205ENST00000372595 MT1HP80294 61 aa3.8□□□□□ -1.8
SCMH1-205ENST00000372595 KRTAP19-1Q8IUB9 90 aa3.78□□□□□ -1.8
SCMH1-205ENST00000372595 SPRR2GQ9BYE4 73 aa3.76□□□□□ -1.81
SCMH1-205ENST00000372595 INE1O15225 51 aa3.75□□□□□ -1.81
SCMH1-205ENST00000372595 MT1FP04733 61 aa3.75□□□□□ -1.81
SCMH1-205ENST00000372595 MT2AP02795 61 aa3.74□□□□□ -1.81
SCMH1-205ENST00000372595 KRTAP9-8Q9BYQ0 159 aa3.68□□□□□ -1.82
SCMH1-205ENST00000372595 LCE3AQ5TA76 89 aa3.66□□□□□ -1.82
SCMH1-205ENST00000372595 KRTAP19-8Q3LI54 63 aa3.59□□□□□ -1.83
SCMH1-205ENST00000372595 MT1BP07438 61 aa3.59□□□□□ -1.83
SCMH1-205ENST00000372595 KRTAP10-5P60370 271 aa3.55□□□□□ -1.84
SCMH1-205ENST00000372595 MT1XP80297 61 aa3.55□□□□□ -1.84
SCMH1-205ENST00000372595 KRTAP10-12P60413 245 aa3.53□□□□□ -1.84
SCMH1-205ENST00000372595 KRTAP9-3Q9BYQ3 159 aa3.53□□□□□ -1.84
SCMH1-205ENST00000372595 KRTAP10-7P60409 375 aaPredicted RBP3.5□□□□□ -1.85
SCMH1-205ENST00000372595 KRTAP8-1Q8IUC2 63 aa3.49□□□□□ -1.85
SCMH1-205ENST00000372595 KRTAP12-3P60328 96 aa3.49□□□□□ -1.85
SCMH1-205ENST00000372595 USH2AO75445 5202 aa3.44□□□□□ -1.86
SCMH1-205ENST00000372595 KMT2DO14686 5537 aa3.37□□□□□ -1.87
SCMH1-205ENST00000372595 KRTAP19-5Q3LI72 72 aa3.35□□□□□ -1.87
SCMH1-205ENST00000372595 KRTAP4-8A0A0G2JLE6 195 aa3.33□□□□□ -1.88
SCMH1-205ENST00000372595 KRTAP4-8Q9BYQ9 185 aa3.33□□□□□ -1.88
SCMH1-205ENST00000372595 LCE3CQ5T5A8 94 aa3.25□□□□□ -1.89
SCMH1-205ENST00000372595 FSIP2Q5CZC0 6907 aa3.22□□□□□ -1.89
SCMH1-205ENST00000372595 KRTAP4-7Q9BYR0 210 aa3.18□□□□□ -1.9
SCMH1-205ENST00000372595 KRTAP19-7Q3SYF9 63 aa3.16□□□□□ -1.9
SCMH1-205ENST00000372595 SSPOA2VEC9 5147 aa3.14□□□□□ -1.91
SCMH1-205ENST00000372595 KRTAP2-3P0C7H8 128 aa3.14□□□□□ -1.91
SCMH1-205ENST00000372595 KRTAP2-4Q9BYR9 128 aa3.14□□□□□ -1.91
SCMH1-205ENST00000372595 KRTAP2-1Q9BYU5 128 aa3.14□□□□□ -1.91
SCMH1-205ENST00000372595 KRTAP9-6A8MVA2 160 aa3.13□□□□□ -1.91
SCMH1-205ENST00000372595 MT1EP04732 61 aa3.08□□□□□ -1.92
SCMH1-205ENST00000372595 MT1LQ93083 61 aa3.08□□□□□ -1.92
SCMH1-205ENST00000372595 KRTAP19-6Q3LI70 58 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms