RNA–Protein interactions for RNA: ENST00000372271.3

FAM78A-203, Transcript of family with sequence similarity 78 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM78A, Length 3,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78A-203ENST00000372271 J3QL48 77 aa6.82□□□□□ -1.32
FAM78A-203ENST00000372271 R4GN34 69 aa6.81□□□□□ -1.32
FAM78A-203ENST00000372271 DYNC1H1Q14204 4646 aaKnown RBP6.8□□□□□ -1.32
FAM78A-203ENST00000372271 M0QZ58 72 aa6.8□□□□□ -1.32
FAM78A-203ENST00000372271 KRTAP13-4Q3LI77 160 aa6.77□□□□□ -1.32
FAM78A-203ENST00000372271 KRTAP10-6P60371 365 aaPredicted RBP6.76□□□□□ -1.33
FAM78A-203ENST00000372271 PKHD1P08F94 4074 aa6.74□□□□□ -1.33
FAM78A-203ENST00000372271 KRTAP3-3Q9BYR6 98 aa6.71□□□□□ -1.34
FAM78A-203ENST00000372271 SACSQ9NZJ4 4579 aa6.69□□□□□ -1.34
FAM78A-203ENST00000372271 MYCBP2O75592 4640 aa6.67□□□□□ -1.34
FAM78A-203ENST00000372271 KRTAP12-2P59991 146 aa6.67□□□□□ -1.34
FAM78A-203ENST00000372271 SEC61BP60468 96 aaKnown RBP6.67□□□□□ -1.34
FAM78A-203ENST00000372271 FAT2Q9NYQ8 4349 aa6.65□□□□□ -1.34
FAM78A-203ENST00000372271 CAMK2N1Q7Z7J9 78 aa6.65□□□□□ -1.34
FAM78A-203ENST00000372271 KRTAP3-2Q9BYR7 98 aa6.64□□□□□ -1.35
FAM78A-203ENST00000372271 TPRXLQ17RH7 258 aa6.63□□□□□ -1.35
FAM78A-203ENST00000372271 PKD1P98161 4303 aa6.63□□□□□ -1.35
FAM78A-203ENST00000372271 LRP1Q07954 4544 aaKnown RBP6.6□□□□□ -1.35
FAM78A-203ENST00000372271 NDUFAF8A1L188 74 aa6.59□□□□□ -1.35
FAM78A-203ENST00000372271 A0A0A0MQY5 61 aa6.57□□□□□ -1.36
FAM78A-203ENST00000372271 KRTAP12-1P59990 96 aa6.57□□□□□ -1.36
FAM78A-203ENST00000372271 APOBP04114 4563 aaKnown RBP6.56□□□□□ -1.36
FAM78A-203ENST00000372271 MT1HL1P0DM35 61 aa6.53□□□□□ -1.36
FAM78A-203ENST00000372271 FAT3Q8TDW7 4589 aa6.44□□□□□ -1.38
FAM78A-203ENST00000372271 KIAA1109Q2LD37 5005 aa6.42□□□□□ -1.38
FAM78A-203ENST00000372271 LUZP6Q538Z0 58 aa6.41□□□□□ -1.38
FAM78A-203ENST00000372271 RYR1P21817 5038 aa6.37□□□□□ -1.39
FAM78A-203ENST00000372271 KMT2CQ8NEZ4 4911 aaKnown RBP6.37□□□□□ -1.39
FAM78A-203ENST00000372271 RYR2Q92736 4967 aa6.35□□□□□ -1.39
FAM78A-203ENST00000372271 M0R2T5 61 aa6.34□□□□□ -1.39
FAM78A-203ENST00000372271 KRTAP4-5Q9BYR2 181 aa6.33□□□□□ -1.4
FAM78A-203ENST00000372271 RYR3Q15413 4870 aa6.32□□□□□ -1.4
FAM78A-203ENST00000372271 KRTAP17-1Q9BYP8 105 aa6.32□□□□□ -1.4
FAM78A-203ENST00000372271 HSPG2P98160 4391 aa6.31□□□□□ -1.4
FAM78A-203ENST00000372271 PLAC4Q8WY50 150 aa6.3□□□□□ -1.4
FAM78A-203ENST00000372271 LRP2P98164 4655 aa6.29□□□□□ -1.4
FAM78A-203ENST00000372271 PKHD1L1Q86WI1 4243 aa6.25□□□□□ -1.41
FAM78A-203ENST00000372271 LORP23490 312 aaPredicted RBP6.23□□□□□ -1.41
FAM78A-203ENST00000372271 KRTAP15-1Q3LI76 137 aa6.23□□□□□ -1.41
FAM78A-203ENST00000372271 TNP1P09430 55 aa6.18□□□□□ -1.42
FAM78A-203ENST00000372271 TNXBP22105 4242 aa6.14□□□□□ -1.43
FAM78A-203ENST00000372271 PP632Q6XCG6 107 aa6.14□□□□□ -1.43
FAM78A-203ENST00000372271 LPAP08519 4548 aa6.11□□□□□ -1.43
FAM78A-203ENST00000372271 KRTAP4-1Q9BYQ7 146 aa6.1□□□□□ -1.43
FAM78A-203ENST00000372271 EPPK1P58107 5090 aaKnown RBP5.92□□□□□ -1.46
FAM78A-203ENST00000372271 KRTAP10-10P60014 251 aa5.91□□□□□ -1.46
FAM78A-203ENST00000372271 ABCA13Q86UQ4 5058 aa5.91□□□□□ -1.46
FAM78A-203ENST00000372271 HERC2O95714 4834 aa5.86□□□□□ -1.47
FAM78A-203ENST00000372271 MUC2Q02817 5179 aa5.74□□□□□ -1.49
FAM78A-203ENST00000372271 KRTAP19-2Q3LHN2 52 aa5.63□□□□□ -1.51
FAM78A-203ENST00000372271 LCE3AQ5TA76 89 aa5.6□□□□□ -1.51
FAM78A-203ENST00000372271 MUC17Q685J3 4493 aa5.59□□□□□ -1.51
FAM78A-203ENST00000372271 KRTAP23-1A1A580 65 aa5.56□□□□□ -1.52
FAM78A-203ENST00000372271 SPRR2GQ9BYE4 73 aa5.53□□□□□ -1.52
FAM78A-203ENST00000372271 FAT4Q6V0I7 4981 aa5.52□□□□□ -1.53
FAM78A-203ENST00000372271 MT1HP80294 61 aa5.5□□□□□ -1.53
FAM78A-203ENST00000372271 HERC1Q15751 4861 aa5.49□□□□□ -1.53
FAM78A-203ENST00000372271 KRTAP19-1Q8IUB9 90 aa5.49□□□□□ -1.53
FAM78A-203ENST00000372271 FLGP20930 4061 aaPredicted RBP5.48□□□□□ -1.53
FAM78A-203ENST00000372271 PRO2289Q9P1D8 64 aa5.47□□□□□ -1.53
FAM78A-203ENST00000372271 MT2AP02795 61 aa5.47□□□□□ -1.53
FAM78A-203ENST00000372271 MT1FP04733 61 aa5.47□□□□□ -1.53
FAM78A-203ENST00000372271 KRTAP10-12P60413 245 aa5.44□□□□□ -1.54
FAM78A-203ENST00000372271 LCE2CQ5TA81 110 aa5.43□□□□□ -1.54
FAM78A-203ENST00000372271 BIRC6Q9NR09 4857 aa5.43□□□□□ -1.54
FAM78A-203ENST00000372271 KRTAP12-3P60328 96 aa5.4□□□□□ -1.54
FAM78A-203ENST00000372271 RNF213Q63HN8 5207 aa5.4□□□□□ -1.55
FAM78A-203ENST00000372271 PCLOQ9Y6V0 5065 aa5.35□□□□□ -1.55
FAM78A-203ENST00000372271 HMCN2Q8NDA2 5059 aa5.26□□□□□ -1.57
FAM78A-203ENST00000372271 SPRR5A0A1B0GTR4 108 aa5.26□□□□□ -1.57
FAM78A-203ENST00000372271 KRTAP9-8Q9BYQ0 159 aa5.26□□□□□ -1.57
FAM78A-203ENST00000372271 KRTAP8-1Q8IUC2 63 aa5.25□□□□□ -1.57
FAM78A-203ENST00000372271 UBR4Q5T4S7 5183 aa5.24□□□□□ -1.57
FAM78A-203ENST00000372271 KRTAP19-8Q3LI54 63 aa5.2□□□□□ -1.58
FAM78A-203ENST00000372271 MT1XP80297 61 aa5.2□□□□□ -1.58
FAM78A-203ENST00000372271 MT1BP07438 61 aa5.19□□□□□ -1.58
FAM78A-203ENST00000372271 KRTAP10-5P60370 271 aa5.19□□□□□ -1.58
FAM78A-203ENST00000372271 KRTAP10-7P60409 375 aaPredicted RBP5.18□□□□□ -1.58
FAM78A-203ENST00000372271 INE1O15225 51 aa5.11□□□□□ -1.59
FAM78A-203ENST00000372271 KRTAP19-5Q3LI72 72 aa5.06□□□□□ -1.6
FAM78A-203ENST00000372271 KRTAP9-3Q9BYQ3 159 aa5.04□□□□□ -1.6
FAM78A-203ENST00000372271 LCE3CQ5T5A8 94 aa4.95□□□□□ -1.62
FAM78A-203ENST00000372271 KRTAP4-8A0A0G2JLE6 195 aa4.93□□□□□ -1.62
FAM78A-203ENST00000372271 KRTAP4-8Q9BYQ9 185 aa4.93□□□□□ -1.62
FAM78A-203ENST00000372271 LCE2BO14633 110 aa4.88□□□□□ -1.63
FAM78A-203ENST00000372271 USH2AO75445 5202 aa4.86□□□□□ -1.63
FAM78A-203ENST00000372271 CRCT1Q9UGL9 99 aa4.83□□□□□ -1.64
FAM78A-203ENST00000372271 FSIP2Q5CZC0 6907 aa4.81□□□□□ -1.64
FAM78A-203ENST00000372271 KMT2DO14686 5537 aa4.8□□□□□ -1.64
FAM78A-203ENST00000372271 KRTAP4-7Q9BYR0 210 aa4.76□□□□□ -1.65
FAM78A-203ENST00000372271 KRTAP19-7Q3SYF9 63 aa4.57□□□□□ -1.68
FAM78A-203ENST00000372271 KRTAP9-6A8MVA2 160 aa4.57□□□□□ -1.68
FAM78A-203ENST00000372271 LCE2AQ5TA79 106 aaPredicted RBP4.56□□□□□ -1.68
FAM78A-203ENST00000372271 MT1LQ93083 61 aa4.55□□□□□ -1.68
FAM78A-203ENST00000372271 MT1EP04732 61 aa4.52□□□□□ -1.69
FAM78A-203ENST00000372271 MT1GP13640 62 aa4.49□□□□□ -1.69
FAM78A-203ENST00000372271 KRTAP19-4Q3LI73 84 aa4.45□□□□□ -1.7
FAM78A-203ENST00000372271 KRTAP4-3Q9BYR4 195 aa4.43□□□□□ -1.7
FAM78A-203ENST00000372271 DSTQ03001 7570 aaKnown RBP4.42□□□□□ -1.7
FAM78A-203ENST00000372271 LOC100996750A0A140TA64 210 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms