RNA–Protein interactions for RNA: ENST00000370819.5

COL21A1-203, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL21A1, Length 4,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-203ENST00000370819 VPS13DQ5THJ4 4388 aa3.84□□□□□ -1.8
COL21A1-203ENST00000370819 DNAH10Q8IVF4 4471 aa3.82□□□□□ -1.8
COL21A1-203ENST00000370819 KMT2AQ03164 3969 aa3.8□□□□□ -1.8
COL21A1-203ENST00000370819 KRTAP12-1P59990 96 aa3.8□□□□□ -1.8
COL21A1-203ENST00000370819 KRTAP10-10P60014 251 aa3.79□□□□□ -1.8
COL21A1-203ENST00000370819 KRTAP13-4Q3LI77 160 aa3.75□□□□□ -1.81
COL21A1-203ENST00000370819 SACSQ9NZJ4 4579 aa3.75□□□□□ -1.81
COL21A1-203ENST00000370819 DNAH2Q9P225 4427 aa3.75□□□□□ -1.81
COL21A1-203ENST00000370819 DNAH8Q96JB1 4490 aa3.74□□□□□ -1.81
COL21A1-203ENST00000370819 KRTAP10-6P60371 365 aaPredicted RBP3.74□□□□□ -1.81
COL21A1-203ENST00000370819 HYDINQ4G0P3 5121 aa3.71□□□□□ -1.82
COL21A1-203ENST00000370819 DNAH17Q9UFH2 4485 aa3.71□□□□□ -1.82
COL21A1-203ENST00000370819 KRTAP15-1Q3LI76 137 aa3.7□□□□□ -1.82
COL21A1-203ENST00000370819 FAT2Q9NYQ8 4349 aa3.7□□□□□ -1.82
COL21A1-203ENST00000370819 RYR2Q92736 4967 aa3.7□□□□□ -1.82
COL21A1-203ENST00000370819 DNAH11Q96DT5 4516 aa3.68□□□□□ -1.82
COL21A1-203ENST00000370819 HECTD4Q9Y4D8 3996 aa3.68□□□□□ -1.82
COL21A1-203ENST00000370819 KMT2CQ8NEZ4 4911 aaKnown RBP3.68□□□□□ -1.82
COL21A1-203ENST00000370819 PKD1P98161 4303 aa3.66□□□□□ -1.82
COL21A1-203ENST00000370819 PRO2289Q9P1D8 64 aa3.65□□□□□ -1.83
COL21A1-203ENST00000370819 DNAH5Q8TE73 4624 aa3.64□□□□□ -1.83
COL21A1-203ENST00000370819 RYR3Q15413 4870 aa3.63□□□□□ -1.83
COL21A1-203ENST00000370819 KRTAP3-2Q9BYR7 98 aa3.61□□□□□ -1.83
COL21A1-203ENST00000370819 KRTAP3-3Q9BYR6 98 aa3.59□□□□□ -1.83
COL21A1-203ENST00000370819 DYNC1H1Q14204 4646 aaKnown RBP3.58□□□□□ -1.84
COL21A1-203ENST00000370819 PKHD1P08F94 4074 aa3.57□□□□□ -1.84
COL21A1-203ENST00000370819 MYCBP2O75592 4640 aa3.55□□□□□ -1.84
COL21A1-203ENST00000370819 LRP1BQ9NZR2 4599 aa3.53□□□□□ -1.84
COL21A1-203ENST00000370819 MT1HL1P0DM35 61 aa3.53□□□□□ -1.84
COL21A1-203ENST00000370819 APOBP04114 4563 aaKnown RBP3.52□□□□□ -1.85
COL21A1-203ENST00000370819 PKHD1L1Q86WI1 4243 aa3.48□□□□□ -1.85
COL21A1-203ENST00000370819 KRTAP10-4P60372 401 aaPredicted RBP3.48□□□□□ -1.85
COL21A1-203ENST00000370819 EPPK1P58107 5090 aaKnown RBP3.47□□□□□ -1.85
COL21A1-203ENST00000370819 VPS13BQ7Z7G8 4022 aa3.46□□□□□ -1.86
COL21A1-203ENST00000370819 HSPG2P98160 4391 aa3.45□□□□□ -1.86
COL21A1-203ENST00000370819 RYR1P21817 5038 aa3.44□□□□□ -1.86
COL21A1-203ENST00000370819 BIRC6Q9NR09 4857 aa3.4□□□□□ -1.87
COL21A1-203ENST00000370819 LORP23490 312 aaPredicted RBP3.39□□□□□ -1.87
COL21A1-203ENST00000370819 FAT1Q14517 4588 aa3.38□□□□□ -1.87
COL21A1-203ENST00000370819 KRTAP17-1Q9BYP8 105 aa3.38□□□□□ -1.87
COL21A1-203ENST00000370819 KRTAP4-5Q9BYR2 181 aa3.38□□□□□ -1.87
COL21A1-203ENST00000370819 KIAA1109Q2LD37 5005 aa3.36□□□□□ -1.87
COL21A1-203ENST00000370819 HERC2O95714 4834 aa3.36□□□□□ -1.87
COL21A1-203ENST00000370819 KRTAP10-12P60413 245 aa3.34□□□□□ -1.88
COL21A1-203ENST00000370819 INE1O15225 51 aa3.32□□□□□ -1.88
COL21A1-203ENST00000370819 FAT3Q8TDW7 4589 aa3.32□□□□□ -1.88
COL21A1-203ENST00000370819 TNXBP22105 4242 aa3.31□□□□□ -1.88
COL21A1-203ENST00000370819 KRTAP12-3P60328 96 aa3.3□□□□□ -1.88
COL21A1-203ENST00000370819 LCE3AQ5TA76 89 aa3.29□□□□□ -1.88
COL21A1-203ENST00000370819 ABCA13Q86UQ4 5058 aa3.28□□□□□ -1.89
COL21A1-203ENST00000370819 LRP1Q07954 4544 aaKnown RBP3.25□□□□□ -1.89
COL21A1-203ENST00000370819 CRCT1Q9UGL9 99 aa3.25□□□□□ -1.89
COL21A1-203ENST00000370819 KRTAP23-1A1A580 65 aa3.24□□□□□ -1.89
COL21A1-203ENST00000370819 PCLOQ9Y6V0 5065 aa3.2□□□□□ -1.9
COL21A1-203ENST00000370819 KRTAP4-1Q9BYQ7 146 aa3.18□□□□□ -1.9
COL21A1-203ENST00000370819 SPRR5A0A1B0GTR4 108 aa3.13□□□□□ -1.91
COL21A1-203ENST00000370819 HERC1Q15751 4861 aa3.08□□□□□ -1.92
COL21A1-203ENST00000370819 HMCN2Q8NDA2 5059 aa3.08□□□□□ -1.92
COL21A1-203ENST00000370819 LPAP08519 4548 aa3.06□□□□□ -1.92
COL21A1-203ENST00000370819 KRTAP10-5P60370 271 aa3.05□□□□□ -1.92
COL21A1-203ENST00000370819 MUC17Q685J3 4493 aa3.04□□□□□ -1.92
COL21A1-203ENST00000370819 MT2AP02795 61 aa3.03□□□□□ -1.92
COL21A1-203ENST00000370819 SPRR2GQ9BYE4 73 aa3.03□□□□□ -1.92
COL21A1-203ENST00000370819 MT1HP80294 61 aa3.02□□□□□ -1.93
COL21A1-203ENST00000370819 LCE2DQ5TA82 110 aaPredicted RBP3□□□□□ -1.93
COL21A1-203ENST00000370819 KRTAP8-1Q8IUC2 63 aa2.99□□□□□ -1.93
COL21A1-203ENST00000370819 FLGP20930 4061 aaPredicted RBP2.99□□□□□ -1.93
COL21A1-203ENST00000370819 MT1FP04733 61 aa2.99□□□□□ -1.93
COL21A1-203ENST00000370819 LRP2P98164 4655 aa2.98□□□□□ -1.93
COL21A1-203ENST00000370819 KRTAP19-5Q3LI72 72 aa2.93□□□□□ -1.94
COL21A1-203ENST00000370819 KRTAP19-1Q8IUB9 90 aa2.9□□□□□ -1.95
COL21A1-203ENST00000370819 UBR4Q5T4S7 5183 aa2.89□□□□□ -1.95
COL21A1-203ENST00000370819 LCE3CQ5T5A8 94 aa2.89□□□□□ -1.95
COL21A1-203ENST00000370819 RNF213Q63HN8 5207 aa2.87□□□□□ -1.95
COL21A1-203ENST00000370819 KRTAP10-7P60409 375 aaPredicted RBP2.84□□□□□ -1.95
COL21A1-203ENST00000370819 SYNE1Q8NF91 8797 aaKnown RBP2.84□□□□□ -1.95
COL21A1-203ENST00000370819 MUC2Q02817 5179 aa2.83□□□□□ -1.96
COL21A1-203ENST00000370819 KRTAP9-6A0A140TA67 174 aa2.82□□□□□ -1.96
COL21A1-203ENST00000370819 KRTAP19-2Q3LHN2 52 aa2.81□□□□□ -1.96
COL21A1-203ENST00000370819 KRTAP19-8Q3LI54 63 aa2.81□□□□□ -1.96
COL21A1-203ENST00000370819 SPRR2FQ96RM1 72 aa2.79□□□□□ -1.96
COL21A1-203ENST00000370819 MT1XP80297 61 aa2.78□□□□□ -1.96
COL21A1-203ENST00000370819 KRTAP9-2Q9BYQ4 174 aa2.78□□□□□ -1.96
COL21A1-203ENST00000370819 FAT4Q6V0I7 4981 aa2.76□□□□□ -1.97
COL21A1-203ENST00000370819 MT1BP07438 61 aa2.75□□□□□ -1.97
COL21A1-203ENST00000370819 OBSCNQ5VST9 7968 aa2.75□□□□□ -1.97
COL21A1-203ENST00000370819 LCE2CQ5TA81 110 aa2.74□□□□□ -1.97
COL21A1-203ENST00000370819 LOC100996750A0A140TA64 210 aa2.73□□□□□ -1.97
COL21A1-203ENST00000370819 KRTAP4-6Q9BYQ5 205 aa2.73□□□□□ -1.97
COL21A1-203ENST00000370819 KRTAP9-8Q9BYQ0 159 aa2.72□□□□□ -1.97
COL21A1-203ENST00000370819 KRTAP4-8A0A0G2JLE6 195 aa2.71□□□□□ -1.98
COL21A1-203ENST00000370819 KRTAP4-8Q9BYQ9 185 aa2.71□□□□□ -1.98
COL21A1-203ENST00000370819 KRTAP19-4Q3LI73 84 aa2.7□□□□□ -1.98
COL21A1-203ENST00000370819 KRTAP12-4P60329 112 aa2.68□□□□□ -1.98
COL21A1-203ENST00000370819 LCE3BQ5TA77 95 aa2.67□□□□□ -1.98
COL21A1-203ENST00000370819 LCE2AQ5TA79 106 aaPredicted RBP2.67□□□□□ -1.98
COL21A1-203ENST00000370819 MT1GP13640 62 aa2.66□□□□□ -1.98
COL21A1-203ENST00000370819 KRTAP9-3Q9BYQ3 159 aa2.63□□□□□ -1.99
COL21A1-203ENST00000370819 KRTAP4-7Q9BYR0 210 aa2.61□□□□□ -1.99
COL21A1-203ENST00000370819 FSIP2Q5CZC0 6907 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms