RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 LPAP08519 4548 aa5.71□□□□□ -1.5
LRIF1-201ENST00000369763 A0A1B0GVY2 172 aa5.69□□□□□ -1.5
LRIF1-201ENST00000369763 KRTAP10-8P60410 259 aa5.66□□□□□ -1.5
LRIF1-201ENST00000369763 TNXBP22105 4242 aa5.64□□□□□ -1.51
LRIF1-201ENST00000369763 K7ERS5 55 aa5.64□□□□□ -1.51
LRIF1-201ENST00000369763 KIAA1109Q2LD37 5005 aa5.63□□□□□ -1.51
LRIF1-201ENST00000369763 KRTAP25-1Q3LHN0 102 aa5.62□□□□□ -1.51
LRIF1-201ENST00000369763 KRTAP13-4Q3LI77 160 aa5.62□□□□□ -1.51
LRIF1-201ENST00000369763 Q5VSD8 79 aa5.61□□□□□ -1.51
LRIF1-201ENST00000369763 LRP2P98164 4655 aa5.61□□□□□ -1.51
LRIF1-201ENST00000369763 RYR3Q15413 4870 aa5.61□□□□□ -1.51
LRIF1-201ENST00000369763 KRTAP3-3Q9BYR6 98 aa5.58□□□□□ -1.52
LRIF1-201ENST00000369763 P0C880 135 aa5.57□□□□□ -1.52
LRIF1-201ENST00000369763 KRTAP10-6P60371 365 aaPredicted RBP5.57□□□□□ -1.52
LRIF1-201ENST00000369763 XP32Q5T750 250 aa5.57□□□□□ -1.52
LRIF1-201ENST00000369763 RYR1P21817 5038 aa5.56□□□□□ -1.52
LRIF1-201ENST00000369763 S4R3F8 94 aa5.56□□□□□ -1.52
LRIF1-201ENST00000369763 RPL37P61927 97 aaKnown RBP5.54□□□□□ -1.52
LRIF1-201ENST00000369763 KRTAP17-1Q9BYP8 105 aa5.54□□□□□ -1.52
LRIF1-201ENST00000369763 C10orf95Q9H7T3 257 aa5.53□□□□□ -1.52
LRIF1-201ENST00000369763 SPINT4Q6UDR6 99 aa5.51□□□□□ -1.53
LRIF1-201ENST00000369763 ROMO1P60602 79 aa5.5□□□□□ -1.53
LRIF1-201ENST00000369763 KRTAP3-2Q9BYR7 98 aa5.5□□□□□ -1.53
LRIF1-201ENST00000369763 ABCA13Q86UQ4 5058 aa5.47□□□□□ -1.53
LRIF1-201ENST00000369763 KRTAP12-2P59991 146 aa5.44□□□□□ -1.54
LRIF1-201ENST00000369763 TPRXLQ17RH7 258 aa5.43□□□□□ -1.54
LRIF1-201ENST00000369763 EPPK1P58107 5090 aaKnown RBP5.43□□□□□ -1.54
LRIF1-201ENST00000369763 MT1HL1P0DM35 61 aa5.38□□□□□ -1.55
LRIF1-201ENST00000369763 KRTAP21-3Q3LHN1 58 aa5.38□□□□□ -1.55
LRIF1-201ENST00000369763 MUC2Q02817 5179 aa5.34□□□□□ -1.55
LRIF1-201ENST00000369763 KRTAP12-1P59990 96 aa5.32□□□□□ -1.56
LRIF1-201ENST00000369763 M0QZ58 72 aa5.29□□□□□ -1.56
LRIF1-201ENST00000369763 KRTAP4-5Q9BYR2 181 aa5.28□□□□□ -1.56
LRIF1-201ENST00000369763 A0A0A0MQY5 61 aa5.24□□□□□ -1.57
LRIF1-201ENST00000369763 R4GN34 69 aa5.24□□□□□ -1.57
LRIF1-201ENST00000369763 NDUFAF8A1L188 74 aa5.21□□□□□ -1.57
LRIF1-201ENST00000369763 LORP23490 312 aaPredicted RBP5.21□□□□□ -1.58
LRIF1-201ENST00000369763 HERC2O95714 4834 aa5.15□□□□□ -1.58
LRIF1-201ENST00000369763 J3QL48 77 aa5.14□□□□□ -1.59
LRIF1-201ENST00000369763 KRTAP4-1Q9BYQ7 146 aa5.13□□□□□ -1.59
LRIF1-201ENST00000369763 MUC17Q685J3 4493 aa5.12□□□□□ -1.59
LRIF1-201ENST00000369763 KRTAP15-1Q3LI76 137 aa5.11□□□□□ -1.59
LRIF1-201ENST00000369763 SEC61BP60468 96 aaKnown RBP5.07□□□□□ -1.6
LRIF1-201ENST00000369763 FAT4Q6V0I7 4981 aa5.06□□□□□ -1.6
LRIF1-201ENST00000369763 HERC1Q15751 4861 aa5.04□□□□□ -1.6
LRIF1-201ENST00000369763 CAMK2N1Q7Z7J9 78 aa5.03□□□□□ -1.6
LRIF1-201ENST00000369763 PCLOQ9Y6V0 5065 aa4.98□□□□□ -1.61
LRIF1-201ENST00000369763 PLAC4Q8WY50 150 aa4.93□□□□□ -1.62
LRIF1-201ENST00000369763 RNF213Q63HN8 5207 aa4.92□□□□□ -1.62
LRIF1-201ENST00000369763 KRTAP19-2Q3LHN2 52 aa4.87□□□□□ -1.63
LRIF1-201ENST00000369763 LUZP6Q538Z0 58 aa4.86□□□□□ -1.63
LRIF1-201ENST00000369763 FLGP20930 4061 aaPredicted RBP4.86□□□□□ -1.63
LRIF1-201ENST00000369763 BIRC6Q9NR09 4857 aa4.79□□□□□ -1.64
LRIF1-201ENST00000369763 UBR4Q5T4S7 5183 aa4.77□□□□□ -1.65
LRIF1-201ENST00000369763 HMCN2Q8NDA2 5059 aa4.76□□□□□ -1.65
LRIF1-201ENST00000369763 M0R2T5 61 aa4.76□□□□□ -1.65
LRIF1-201ENST00000369763 TNP1P09430 55 aa4.73□□□□□ -1.65
LRIF1-201ENST00000369763 PP632Q6XCG6 107 aa4.7□□□□□ -1.66
LRIF1-201ENST00000369763 LCE2CQ5TA81 110 aa4.6□□□□□ -1.67
LRIF1-201ENST00000369763 KRTAP10-10P60014 251 aa4.59□□□□□ -1.67
LRIF1-201ENST00000369763 KRTAP19-1Q8IUB9 90 aa4.57□□□□□ -1.68
LRIF1-201ENST00000369763 LCE3AQ5TA76 89 aa4.53□□□□□ -1.68
LRIF1-201ENST00000369763 MT1HP80294 61 aa4.51□□□□□ -1.69
LRIF1-201ENST00000369763 MT1FP04733 61 aa4.51□□□□□ -1.69
LRIF1-201ENST00000369763 SPRR2GQ9BYE4 73 aa4.5□□□□□ -1.69
LRIF1-201ENST00000369763 USH2AO75445 5202 aa4.47□□□□□ -1.69
LRIF1-201ENST00000369763 MT2AP02795 61 aa4.47□□□□□ -1.69
LRIF1-201ENST00000369763 KMT2DO14686 5537 aa4.42□□□□□ -1.7
LRIF1-201ENST00000369763 KRTAP9-8Q9BYQ0 159 aa4.39□□□□□ -1.71
LRIF1-201ENST00000369763 KRTAP23-1A1A580 65 aa4.38□□□□□ -1.71
LRIF1-201ENST00000369763 SPRR5A0A1B0GTR4 108 aa4.37□□□□□ -1.71
LRIF1-201ENST00000369763 KRTAP10-5P60370 271 aa4.31□□□□□ -1.72
LRIF1-201ENST00000369763 MT1BP07438 61 aa4.31□□□□□ -1.72
LRIF1-201ENST00000369763 MT1XP80297 61 aa4.31□□□□□ -1.72
LRIF1-201ENST00000369763 KRTAP10-7P60409 375 aaPredicted RBP4.29□□□□□ -1.72
LRIF1-201ENST00000369763 KRTAP10-12P60413 245 aa4.28□□□□□ -1.72
LRIF1-201ENST00000369763 KRTAP12-3P60328 96 aa4.27□□□□□ -1.73
LRIF1-201ENST00000369763 KRTAP8-1Q8IUC2 63 aa4.25□□□□□ -1.73
LRIF1-201ENST00000369763 KRTAP19-8Q3LI54 63 aa4.24□□□□□ -1.73
LRIF1-201ENST00000369763 FSIP2Q5CZC0 6907 aa4.2□□□□□ -1.74
LRIF1-201ENST00000369763 KRTAP9-3Q9BYQ3 159 aa4.18□□□□□ -1.74
LRIF1-201ENST00000369763 PRO2289Q9P1D8 64 aa4.12□□□□□ -1.75
LRIF1-201ENST00000369763 KRTAP4-8A0A0G2JLE6 195 aa4.11□□□□□ -1.75
LRIF1-201ENST00000369763 KRTAP19-5Q3LI72 72 aa4.11□□□□□ -1.75
LRIF1-201ENST00000369763 KRTAP4-8Q9BYQ9 185 aa4.11□□□□□ -1.75
LRIF1-201ENST00000369763 LCE2BO14633 110 aa4.09□□□□□ -1.76
LRIF1-201ENST00000369763 KRTAP4-7Q9BYR0 210 aa4□□□□□ -1.77
LRIF1-201ENST00000369763 LCE3CQ5T5A8 94 aa3.98□□□□□ -1.77
LRIF1-201ENST00000369763 KRTAP9-6A8MVA2 160 aa3.93□□□□□ -1.78
LRIF1-201ENST00000369763 INE1O15225 51 aa3.9□□□□□ -1.78
LRIF1-201ENST00000369763 DSTQ03001 7570 aaKnown RBP3.88□□□□□ -1.79
LRIF1-201ENST00000369763 SSPOA2VEC9 5147 aa3.87□□□□□ -1.79
LRIF1-201ENST00000369763 MUC12Q9UKN1 5478 aa3.86□□□□□ -1.79
LRIF1-201ENST00000369763 KRTAP19-7Q3SYF9 63 aa3.83□□□□□ -1.8
LRIF1-201ENST00000369763 LCE2AQ5TA79 106 aaPredicted RBP3.82□□□□□ -1.8
LRIF1-201ENST00000369763 FCGBPQ9Y6R7 5405 aaPredicted RBP3.8□□□□□ -1.8
LRIF1-201ENST00000369763 LCE2DQ5TA82 110 aaPredicted RBP3.76□□□□□ -1.81
LRIF1-201ENST00000369763 CRCT1Q9UGL9 99 aa3.75□□□□□ -1.81
LRIF1-201ENST00000369763 KRTAP4-3Q9BYR4 195 aa3.72□□□□□ -1.81
LRIF1-201ENST00000369763 MT1LQ93083 61 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms