RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 DMBT1Q9UGM3 2413 aaPredicted RBP8.27□□□□□ -1.09
CHD1L-203ENST00000369259 FAT2Q9NYQ8 4349 aa8.25□□□□□ -1.09
CHD1L-203ENST00000369259 KRTAP12-2P59991 146 aa8.24□□□□□ -1.09
CHD1L-203ENST00000369259 PKHD1L1Q86WI1 4243 aa8.19□□□□□ -1.1
CHD1L-203ENST00000369259 XP32Q5T750 250 aa8.15□□□□□ -1.1
CHD1L-203ENST00000369259 KRTAP12-1P59990 96 aa8.14□□□□□ -1.11
CHD1L-203ENST00000369259 SMR3BP02814 79 aaPredicted RBP8.12□□□□□ -1.11
CHD1L-203ENST00000369259 HYDINQ4G0P3 5121 aa8.09□□□□□ -1.11
CHD1L-203ENST00000369259 KRTAP10-8P60410 259 aa8.07□□□□□ -1.12
CHD1L-203ENST00000369259 PKHD1P08F94 4074 aa8.05□□□□□ -1.12
CHD1L-203ENST00000369259 APOBP04114 4563 aaKnown RBP8.02□□□□□ -1.13
CHD1L-203ENST00000369259 KRTAP10-4P60372 401 aaPredicted RBP8.01□□□□□ -1.13
CHD1L-203ENST00000369259 A0A0A0MQY5 61 aa7.98□□□□□ -1.13
CHD1L-203ENST00000369259 M0QZ58 72 aa7.96□□□□□ -1.13
CHD1L-203ENST00000369259 FAT1Q14517 4588 aa7.94□□□□□ -1.14
CHD1L-203ENST00000369259 DYNC1H1Q14204 4646 aaKnown RBP7.93□□□□□ -1.14
CHD1L-203ENST00000369259 KMT2CQ8NEZ4 4911 aaKnown RBP7.92□□□□□ -1.14
CHD1L-203ENST00000369259 LRP1Q07954 4544 aaKnown RBP7.91□□□□□ -1.14
CHD1L-203ENST00000369259 FAT3Q8TDW7 4589 aa7.89□□□□□ -1.15
CHD1L-203ENST00000369259 PLAC4Q8WY50 150 aa7.85□□□□□ -1.15
CHD1L-203ENST00000369259 HSPG2P98160 4391 aa7.85□□□□□ -1.15
CHD1L-203ENST00000369259 LUZP6Q538Z0 58 aa7.84□□□□□ -1.15
CHD1L-203ENST00000369259 RYR3Q15413 4870 aa7.81□□□□□ -1.16
CHD1L-203ENST00000369259 TNXBP22105 4242 aa7.78□□□□□ -1.16
CHD1L-203ENST00000369259 A0A1B0GVY2 172 aa7.73□□□□□ -1.17
CHD1L-203ENST00000369259 RYR2Q92736 4967 aa7.71□□□□□ -1.18
CHD1L-203ENST00000369259 MYCBP2O75592 4640 aa7.66□□□□□ -1.18
CHD1L-203ENST00000369259 R4GN34 69 aa7.64□□□□□ -1.19
CHD1L-203ENST00000369259 EPPK1P58107 5090 aaKnown RBP7.55□□□□□ -1.2
CHD1L-203ENST00000369259 PP632Q6XCG6 107 aa7.53□□□□□ -1.2
CHD1L-203ENST00000369259 LPAP08519 4548 aa7.51□□□□□ -1.21
CHD1L-203ENST00000369259 LORP23490 312 aaPredicted RBP7.44□□□□□ -1.22
CHD1L-203ENST00000369259 Q5VSD8 79 aa7.44□□□□□ -1.22
CHD1L-203ENST00000369259 BIRC6Q9NR09 4857 aa7.42□□□□□ -1.22
CHD1L-203ENST00000369259 LRP2P98164 4655 aa7.37□□□□□ -1.23
CHD1L-203ENST00000369259 MT1HL1P0DM35 61 aa7.33□□□□□ -1.24
CHD1L-203ENST00000369259 CAMK2N1Q7Z7J9 78 aa7.33□□□□□ -1.24
CHD1L-203ENST00000369259 RYR1P21817 5038 aa7.27□□□□□ -1.25
CHD1L-203ENST00000369259 KIAA1109Q2LD37 5005 aa7.27□□□□□ -1.25
CHD1L-203ENST00000369259 SPRR5A0A1B0GTR4 108 aa7.22□□□□□ -1.25
CHD1L-203ENST00000369259 KRTAP17-1Q9BYP8 105 aa7.18□□□□□ -1.26
CHD1L-203ENST00000369259 HERC2O95714 4834 aa7.17□□□□□ -1.26
CHD1L-203ENST00000369259 KRTAP23-1A1A580 65 aa7.15□□□□□ -1.27
CHD1L-203ENST00000369259 PCLOQ9Y6V0 5065 aa7.13□□□□□ -1.27
CHD1L-203ENST00000369259 TNP1P09430 55 aa7.12□□□□□ -1.27
CHD1L-203ENST00000369259 SEC61BP60468 96 aaKnown RBP7.09□□□□□ -1.27
CHD1L-203ENST00000369259 MUC17Q685J3 4493 aa7.05□□□□□ -1.28
CHD1L-203ENST00000369259 KRTAP4-5Q9BYR2 181 aa7.01□□□□□ -1.29
CHD1L-203ENST00000369259 ABCA13Q86UQ4 5058 aa7.01□□□□□ -1.29
CHD1L-203ENST00000369259 KRTAP4-1Q9BYQ7 146 aa7□□□□□ -1.29
CHD1L-203ENST00000369259 PRO2289Q9P1D8 64 aa6.96□□□□□ -1.29
CHD1L-203ENST00000369259 KRTAP19-2Q3LHN2 52 aa6.95□□□□□ -1.3
CHD1L-203ENST00000369259 INE1O15225 51 aa6.8□□□□□ -1.32
CHD1L-203ENST00000369259 HERC1Q15751 4861 aa6.77□□□□□ -1.33
CHD1L-203ENST00000369259 FLGP20930 4061 aaPredicted RBP6.69□□□□□ -1.34
CHD1L-203ENST00000369259 LCE3AQ5TA76 89 aa6.68□□□□□ -1.34
CHD1L-203ENST00000369259 J3QL48 77 aa6.63□□□□□ -1.35
CHD1L-203ENST00000369259 SPRR2GQ9BYE4 73 aa6.57□□□□□ -1.36
CHD1L-203ENST00000369259 KRTAP19-1Q8IUB9 90 aa6.51□□□□□ -1.37
CHD1L-203ENST00000369259 KRTAP8-1Q8IUC2 63 aa6.51□□□□□ -1.37
CHD1L-203ENST00000369259 MUC2Q02817 5179 aa6.49□□□□□ -1.37
CHD1L-203ENST00000369259 HMCN2Q8NDA2 5059 aa6.45□□□□□ -1.38
CHD1L-203ENST00000369259 UBR4Q5T4S7 5183 aa6.41□□□□□ -1.38
CHD1L-203ENST00000369259 KRTAP12-3P60328 96 aa6.33□□□□□ -1.4
CHD1L-203ENST00000369259 KRTAP10-12P60413 245 aa6.31□□□□□ -1.4
CHD1L-203ENST00000369259 LCE2CQ5TA81 110 aa6.3□□□□□ -1.4
CHD1L-203ENST00000369259 RNF213Q63HN8 5207 aa6.27□□□□□ -1.41
CHD1L-203ENST00000369259 M0R2T5 61 aa6.2□□□□□ -1.42
CHD1L-203ENST00000369259 KRTAP10-5P60370 271 aa6.2□□□□□ -1.42
CHD1L-203ENST00000369259 KRTAP19-8Q3LI54 63 aa6.18□□□□□ -1.42
CHD1L-203ENST00000369259 KRTAP10-10P60014 251 aa6.17□□□□□ -1.42
CHD1L-203ENST00000369259 FAT4Q6V0I7 4981 aa6.17□□□□□ -1.42
CHD1L-203ENST00000369259 MT1FP04733 61 aa6.17□□□□□ -1.42
CHD1L-203ENST00000369259 MT1XP80297 61 aa6.17□□□□□ -1.42
CHD1L-203ENST00000369259 MT2AP02795 61 aa6.14□□□□□ -1.43
CHD1L-203ENST00000369259 MT1BP07438 61 aa6.09□□□□□ -1.43
CHD1L-203ENST00000369259 MT1HP80294 61 aa6.09□□□□□ -1.43
CHD1L-203ENST00000369259 KRTAP10-7P60409 375 aaPredicted RBP6.06□□□□□ -1.44
CHD1L-203ENST00000369259 KRTAP9-8Q9BYQ0 159 aa6.04□□□□□ -1.44
CHD1L-203ENST00000369259 LCE3CQ5T5A8 94 aa6□□□□□ -1.45
CHD1L-203ENST00000369259 KRTAP19-5Q3LI72 72 aa5.89□□□□□ -1.47
CHD1L-203ENST00000369259 KRTAP9-6A8MVA2 160 aa5.82□□□□□ -1.48
CHD1L-203ENST00000369259 KRTAP2-3P0C7H8 128 aa5.82□□□□□ -1.48
CHD1L-203ENST00000369259 KRTAP2-4Q9BYR9 128 aa5.82□□□□□ -1.48
CHD1L-203ENST00000369259 KRTAP2-1Q9BYU5 128 aa5.82□□□□□ -1.48
CHD1L-203ENST00000369259 KRTAP9-3Q9BYQ3 159 aa5.75□□□□□ -1.49
CHD1L-203ENST00000369259 LCE2AQ5TA79 106 aaPredicted RBP5.74□□□□□ -1.49
CHD1L-203ENST00000369259 KRTAP9-2Q9BYQ4 174 aa5.6□□□□□ -1.51
CHD1L-203ENST00000369259 KRTAP4-7Q9BYR0 210 aa5.56□□□□□ -1.52
CHD1L-203ENST00000369259 KRTAP4-8A0A0G2JLE6 195 aa5.56□□□□□ -1.52
CHD1L-203ENST00000369259 KRTAP4-8Q9BYQ9 185 aa5.56□□□□□ -1.52
CHD1L-203ENST00000369259 FSIP2Q5CZC0 6907 aa5.51□□□□□ -1.53
CHD1L-203ENST00000369259 KMT2DO14686 5537 aa5.51□□□□□ -1.53
CHD1L-203ENST00000369259 KRTAP19-4Q3LI73 84 aa5.49□□□□□ -1.53
CHD1L-203ENST00000369259 KRTAP19-7Q3SYF9 63 aa5.49□□□□□ -1.53
CHD1L-203ENST00000369259 LCE2BO14633 110 aa5.44□□□□□ -1.54
CHD1L-203ENST00000369259 LCE2DQ5TA82 110 aaPredicted RBP5.41□□□□□ -1.54
CHD1L-203ENST00000369259 KRTAP9-6A0A140TA67 174 aa5.4□□□□□ -1.55
CHD1L-203ENST00000369259 MT1LQ93083 61 aa5.38□□□□□ -1.55
CHD1L-203ENST00000369259 USH2AO75445 5202 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms