RNA–Protein interactions for RNA: ENST00000369214.2

PRDM13-201, Transcript of PR/SET domain 13, humanhuman

TSL 5

Gene PRDM13, Length 3,232 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM13-201ENST00000369214 FAT3Q8TDW7 4589 aa9.61□□□□□ -0.87
PRDM13-201ENST00000369214 KRTAP3-3Q9BYR6 98 aa9.59□□□□□ -0.87
PRDM13-201ENST00000369214 EPPK1P58107 5090 aaKnown RBP9.57□□□□□ -0.88
PRDM13-201ENST00000369214 KRTAP10-6P60371 365 aaPredicted RBP9.57□□□□□ -0.88
PRDM13-201ENST00000369214 DMBT1Q9UGM3 2413 aaPredicted RBP9.56□□□□□ -0.88
PRDM13-201ENST00000369214 RPL37P61927 97 aaKnown RBP9.54□□□□□ -0.88
PRDM13-201ENST00000369214 KRTAP10-8P60410 259 aa9.52□□□□□ -0.88
PRDM13-201ENST00000369214 TNXBP22105 4242 aa9.51□□□□□ -0.89
PRDM13-201ENST00000369214 KRTAP13-4Q3LI77 160 aa9.49□□□□□ -0.89
PRDM13-201ENST00000369214 KRTAP3-2Q9BYR7 98 aa9.49□□□□□ -0.89
PRDM13-201ENST00000369214 ROMO1P60602 79 aa9.48□□□□□ -0.89
PRDM13-201ENST00000369214 S4R3F8 94 aa9.47□□□□□ -0.89
PRDM13-201ENST00000369214 LRP1Q07954 4544 aaKnown RBP9.46□□□□□ -0.89
PRDM13-201ENST00000369214 XP32Q5T750 250 aa9.46□□□□□ -0.89
PRDM13-201ENST00000369214 HSPG2P98160 4391 aa9.46□□□□□ -0.9
PRDM13-201ENST00000369214 A0A0D9SG42 100 aa9.43□□□□□ -0.9
PRDM13-201ENST00000369214 KIAA1109Q2LD37 5005 aa9.39□□□□□ -0.91
PRDM13-201ENST00000369214 Q5VSD8 79 aa9.37□□□□□ -0.91
PRDM13-201ENST00000369214 P0C880 135 aa9.35□□□□□ -0.91
PRDM13-201ENST00000369214 MYCBP2O75592 4640 aa9.26□□□□□ -0.93
PRDM13-201ENST00000369214 A0A0A0MQY5 61 aa9.26□□□□□ -0.93
PRDM13-201ENST00000369214 TPRXLQ17RH7 258 aa9.25□□□□□ -0.93
PRDM13-201ENST00000369214 BIRC6Q9NR09 4857 aa9.2□□□□□ -0.94
PRDM13-201ENST00000369214 KRTAP12-2P59991 146 aa9.2□□□□□ -0.94
PRDM13-201ENST00000369214 SPINT4Q6UDR6 99 aa9.18□□□□□ -0.94
PRDM13-201ENST00000369214 NDUFAF8A1L188 74 aa9.17□□□□□ -0.94
PRDM13-201ENST00000369214 MT1HL1P0DM35 61 aa9.16□□□□□ -0.94
PRDM13-201ENST00000369214 RYR1P21817 5038 aa9.15□□□□□ -0.94
PRDM13-201ENST00000369214 KRTAP17-1Q9BYP8 105 aa9.15□□□□□ -0.94
PRDM13-201ENST00000369214 C10orf95Q9H7T3 257 aa9.15□□□□□ -0.94
PRDM13-201ENST00000369214 KRTAP12-1P59990 96 aa9.13□□□□□ -0.95
PRDM13-201ENST00000369214 KRTAP4-5Q9BYR2 181 aa9.08□□□□□ -0.96
PRDM13-201ENST00000369214 M0QZ58 72 aa9.06□□□□□ -0.96
PRDM13-201ENST00000369214 LPAP08519 4548 aa9.04□□□□□ -0.96
PRDM13-201ENST00000369214 LRP2P98164 4655 aa8.99□□□□□ -0.97
PRDM13-201ENST00000369214 HERC2O95714 4834 aa8.94□□□□□ -0.98
PRDM13-201ENST00000369214 ABCA13Q86UQ4 5058 aa8.94□□□□□ -0.98
PRDM13-201ENST00000369214 PCLOQ9Y6V0 5065 aa8.91□□□□□ -0.98
PRDM13-201ENST00000369214 KRTAP15-1Q3LI76 137 aa8.9□□□□□ -0.99
PRDM13-201ENST00000369214 R4GN34 69 aa8.79□□□□□ -1
PRDM13-201ENST00000369214 J3QL48 77 aa8.76□□□□□ -1.01
PRDM13-201ENST00000369214 HERC1Q15751 4861 aa8.7□□□□□ -1.02
PRDM13-201ENST00000369214 SEC61BP60468 96 aaKnown RBP8.68□□□□□ -1.02
PRDM13-201ENST00000369214 MUC17Q685J3 4493 aa8.66□□□□□ -1.02
PRDM13-201ENST00000369214 LORP23490 312 aaPredicted RBP8.66□□□□□ -1.02
PRDM13-201ENST00000369214 LUZP6Q538Z0 58 aa8.6□□□□□ -1.03
PRDM13-201ENST00000369214 KRTAP4-1Q9BYQ7 146 aa8.58□□□□□ -1.04
PRDM13-201ENST00000369214 KRTAP19-2Q3LHN2 52 aa8.47□□□□□ -1.05
PRDM13-201ENST00000369214 PLAC4Q8WY50 150 aa8.44□□□□□ -1.06
PRDM13-201ENST00000369214 CAMK2N1Q7Z7J9 78 aa8.37□□□□□ -1.07
PRDM13-201ENST00000369214 PP632Q6XCG6 107 aa8.34□□□□□ -1.07
PRDM13-201ENST00000369214 UBR4Q5T4S7 5183 aa8.26□□□□□ -1.09
PRDM13-201ENST00000369214 FLGP20930 4061 aaPredicted RBP8.19□□□□□ -1.1
PRDM13-201ENST00000369214 RNF213Q63HN8 5207 aa8.18□□□□□ -1.1
PRDM13-201ENST00000369214 HMCN2Q8NDA2 5059 aa8.15□□□□□ -1.1
PRDM13-201ENST00000369214 TNP1P09430 55 aa8.08□□□□□ -1.12
PRDM13-201ENST00000369214 MUC2Q02817 5179 aa8.08□□□□□ -1.12
PRDM13-201ENST00000369214 KRTAP23-1A1A580 65 aa8.04□□□□□ -1.12
PRDM13-201ENST00000369214 LCE2CQ5TA81 110 aa7.87□□□□□ -1.15
PRDM13-201ENST00000369214 SPRR2GQ9BYE4 73 aa7.86□□□□□ -1.15
PRDM13-201ENST00000369214 SPRR5A0A1B0GTR4 108 aa7.85□□□□□ -1.15
PRDM13-201ENST00000369214 KRTAP19-1Q8IUB9 90 aa7.81□□□□□ -1.16
PRDM13-201ENST00000369214 FAT4Q6V0I7 4981 aa7.71□□□□□ -1.17
PRDM13-201ENST00000369214 M0R2T5 61 aa7.69□□□□□ -1.18
PRDM13-201ENST00000369214 MT1HP80294 61 aa7.64□□□□□ -1.19
PRDM13-201ENST00000369214 LCE3AQ5TA76 89 aa7.64□□□□□ -1.19
PRDM13-201ENST00000369214 MT1FP04733 61 aa7.58□□□□□ -1.2
PRDM13-201ENST00000369214 MT2AP02795 61 aa7.58□□□□□ -1.2
PRDM13-201ENST00000369214 KRTAP10-10P60014 251 aa7.57□□□□□ -1.2
PRDM13-201ENST00000369214 KRTAP9-8Q9BYQ0 159 aa7.5□□□□□ -1.21
PRDM13-201ENST00000369214 KRTAP19-8Q3LI54 63 aa7.49□□□□□ -1.21
PRDM13-201ENST00000369214 KRTAP8-1Q8IUC2 63 aa7.46□□□□□ -1.22
PRDM13-201ENST00000369214 KRTAP10-5P60370 271 aa7.39□□□□□ -1.23
PRDM13-201ENST00000369214 MT1BP07438 61 aa7.38□□□□□ -1.23
PRDM13-201ENST00000369214 MT1XP80297 61 aa7.37□□□□□ -1.23
PRDM13-201ENST00000369214 FSIP2Q5CZC0 6907 aa7.31□□□□□ -1.24
PRDM13-201ENST00000369214 KRTAP10-12P60413 245 aa7.27□□□□□ -1.24
PRDM13-201ENST00000369214 KRTAP12-3P60328 96 aa7.26□□□□□ -1.25
PRDM13-201ENST00000369214 KRTAP9-3Q9BYQ3 159 aa7.18□□□□□ -1.26
PRDM13-201ENST00000369214 KRTAP10-7P60409 375 aaPredicted RBP7.17□□□□□ -1.26
PRDM13-201ENST00000369214 PRO2289Q9P1D8 64 aa7.13□□□□□ -1.27
PRDM13-201ENST00000369214 LCE2AQ5TA79 106 aaPredicted RBP7.11□□□□□ -1.27
PRDM13-201ENST00000369214 INE1O15225 51 aa7.03□□□□□ -1.28
PRDM13-201ENST00000369214 KRTAP19-5Q3LI72 72 aa6.91□□□□□ -1.3
PRDM13-201ENST00000369214 KRTAP9-2Q9BYQ4 174 aa6.87□□□□□ -1.31
PRDM13-201ENST00000369214 USH2AO75445 5202 aa6.87□□□□□ -1.31
PRDM13-201ENST00000369214 LCE2BO14633 110 aa6.86□□□□□ -1.31
PRDM13-201ENST00000369214 LCE3CQ5T5A8 94 aa6.86□□□□□ -1.31
PRDM13-201ENST00000369214 KRTAP4-8A0A0G2JLE6 195 aa6.68□□□□□ -1.34
PRDM13-201ENST00000369214 KRTAP4-8Q9BYQ9 185 aa6.68□□□□□ -1.34
PRDM13-201ENST00000369214 KMT2DO14686 5537 aa6.65□□□□□ -1.34
PRDM13-201ENST00000369214 KRTAP9-6A8MVA2 160 aa6.61□□□□□ -1.35
PRDM13-201ENST00000369214 KRTAP19-7Q3SYF9 63 aa6.56□□□□□ -1.36
PRDM13-201ENST00000369214 SSPOA2VEC9 5147 aa6.53□□□□□ -1.36
PRDM13-201ENST00000369214 CRCT1Q9UGL9 99 aa6.52□□□□□ -1.37
PRDM13-201ENST00000369214 LCE2DQ5TA82 110 aaPredicted RBP6.51□□□□□ -1.37
PRDM13-201ENST00000369214 KRTAP9-6A0A140TA67 174 aa6.49□□□□□ -1.37
PRDM13-201ENST00000369214 KRTAP4-7Q9BYR0 210 aa6.47□□□□□ -1.37
PRDM13-201ENST00000369214 KRTAP2-3P0C7H8 128 aa6.46□□□□□ -1.38
PRDM13-201ENST00000369214 KRTAP2-4Q9BYR9 128 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms