RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 DNHD1Q96M86 4753 aa4.6□□□□□ -1.67
PRDM1-201ENST00000369089 KRTAP4-5Q9BYR2 181 aa4.56□□□□□ -1.68
PRDM1-201ENST00000369089 PLECQ15149 4684 aaKnown RBP4.56□□□□□ -1.68
PRDM1-201ENST00000369089 DNAH5Q8TE73 4624 aa4.52□□□□□ -1.69
PRDM1-201ENST00000369089 DNAH11Q96DT5 4516 aa4.51□□□□□ -1.69
PRDM1-201ENST00000369089 DNAH1Q9P2D7 4330 aa4.5□□□□□ -1.69
PRDM1-201ENST00000369089 VPS13DQ5THJ4 4388 aa4.45□□□□□ -1.7
PRDM1-201ENST00000369089 DNAH10Q8IVF4 4471 aa4.43□□□□□ -1.7
PRDM1-201ENST00000369089 STARD9Q9P2P6 4700 aa4.4□□□□□ -1.7
PRDM1-201ENST00000369089 SPRR5A0A1B0GTR4 108 aa4.39□□□□□ -1.71
PRDM1-201ENST00000369089 DNAH17Q9UFH2 4485 aa4.39□□□□□ -1.71
PRDM1-201ENST00000369089 FAT1Q14517 4588 aa4.38□□□□□ -1.71
PRDM1-201ENST00000369089 PRKDCP78527 4128 aaKnown RBP4.37□□□□□ -1.71
PRDM1-201ENST00000369089 DYNC1H1Q14204 4646 aaKnown RBP4.36□□□□□ -1.71
PRDM1-201ENST00000369089 LCE3AQ5TA76 89 aa4.36□□□□□ -1.71
PRDM1-201ENST00000369089 LORP23490 312 aaPredicted RBP4.34□□□□□ -1.72
PRDM1-201ENST00000369089 KRTAP12-3P60328 96 aa4.33□□□□□ -1.72
PRDM1-201ENST00000369089 LRP1BQ9NZR2 4599 aa4.33□□□□□ -1.72
PRDM1-201ENST00000369089 DNAH2Q9P225 4427 aa4.3□□□□□ -1.72
PRDM1-201ENST00000369089 RYR1P21817 5038 aa4.27□□□□□ -1.73
PRDM1-201ENST00000369089 ANK2Q01484 3957 aa4.26□□□□□ -1.73
PRDM1-201ENST00000369089 KRTAP10-12P60413 245 aa4.24□□□□□ -1.73
PRDM1-201ENST00000369089 KMT2AQ03164 3969 aa4.23□□□□□ -1.73
PRDM1-201ENST00000369089 DNAH8Q96JB1 4490 aa4.23□□□□□ -1.73
PRDM1-201ENST00000369089 DYNC2H1Q8NCM8 4307 aaKnown RBP4.22□□□□□ -1.73
PRDM1-201ENST00000369089 KIAA1109Q2LD37 5005 aa4.22□□□□□ -1.73
PRDM1-201ENST00000369089 DNAH3Q8TD57 4116 aa4.19□□□□□ -1.74
PRDM1-201ENST00000369089 FAT2Q9NYQ8 4349 aa4.18□□□□□ -1.74
PRDM1-201ENST00000369089 KRTAP4-1Q9BYQ7 146 aa4.18□□□□□ -1.74
PRDM1-201ENST00000369089 SACSQ9NZJ4 4579 aa4.18□□□□□ -1.74
PRDM1-201ENST00000369089 LYSTQ99698 3801 aa4.16□□□□□ -1.74
PRDM1-201ENST00000369089 MYCBP2O75592 4640 aa4.13□□□□□ -1.75
PRDM1-201ENST00000369089 RYR3Q15413 4870 aa4.12□□□□□ -1.75
PRDM1-201ENST00000369089 VPS13BQ7Z7G8 4022 aa4.11□□□□□ -1.75
PRDM1-201ENST00000369089 KRTAP17-1Q9BYP8 105 aa4.1□□□□□ -1.75
PRDM1-201ENST00000369089 CMYA5Q8N3K9 4069 aa4.09□□□□□ -1.76
PRDM1-201ENST00000369089 APOBP04114 4563 aaKnown RBP4.09□□□□□ -1.76
PRDM1-201ENST00000369089 LRP1Q07954 4544 aaKnown RBP4.06□□□□□ -1.76
PRDM1-201ENST00000369089 KRTAP8-1Q8IUC2 63 aa4.04□□□□□ -1.76
PRDM1-201ENST00000369089 DNAH6Q9C0G6 4158 aa4.02□□□□□ -1.77
PRDM1-201ENST00000369089 FAT3Q8TDW7 4589 aa4□□□□□ -1.77
PRDM1-201ENST00000369089 KRTAP10-5P60370 271 aa3.99□□□□□ -1.77
PRDM1-201ENST00000369089 MT1HP80294 61 aa3.99□□□□□ -1.77
PRDM1-201ENST00000369089 DNAH7Q8WXX0 4024 aa3.99□□□□□ -1.77
PRDM1-201ENST00000369089 RYR2Q92736 4967 aa3.98□□□□□ -1.77
PRDM1-201ENST00000369089 HECTD4Q9Y4D8 3996 aa3.98□□□□□ -1.77
PRDM1-201ENST00000369089 HYDINQ4G0P3 5121 aa3.97□□□□□ -1.77
PRDM1-201ENST00000369089 FRAS1Q86XX4 4008 aa3.96□□□□□ -1.78
PRDM1-201ENST00000369089 LCE2BO14633 110 aa3.95□□□□□ -1.78
PRDM1-201ENST00000369089 MT2AP02795 61 aa3.95□□□□□ -1.78
PRDM1-201ENST00000369089 SPRR2GQ9BYE4 73 aa3.92□□□□□ -1.78
PRDM1-201ENST00000369089 HERC2O95714 4834 aa3.92□□□□□ -1.78
PRDM1-201ENST00000369089 PKHD1P08F94 4074 aa3.9□□□□□ -1.79
PRDM1-201ENST00000369089 LCE3CQ5T5A8 94 aa3.9□□□□□ -1.79
PRDM1-201ENST00000369089 MT1FP04733 61 aa3.88□□□□□ -1.79
PRDM1-201ENST00000369089 LRP2P98164 4655 aa3.87□□□□□ -1.79
PRDM1-201ENST00000369089 CRCT1Q9UGL9 99 aa3.83□□□□□ -1.8
PRDM1-201ENST00000369089 KMT2CQ8NEZ4 4911 aaKnown RBP3.83□□□□□ -1.8
PRDM1-201ENST00000369089 HSPG2P98160 4391 aa3.83□□□□□ -1.8
PRDM1-201ENST00000369089 KRTAP12-4P60329 112 aa3.8□□□□□ -1.8
PRDM1-201ENST00000369089 BIRC6Q9NR09 4857 aa3.78□□□□□ -1.8
PRDM1-201ENST00000369089 PKD1P98161 4303 aa3.78□□□□□ -1.8
PRDM1-201ENST00000369089 KRTAP19-1Q8IUB9 90 aa3.76□□□□□ -1.81
PRDM1-201ENST00000369089 LCE2CQ5TA81 110 aa3.75□□□□□ -1.81
PRDM1-201ENST00000369089 LCE2AQ5TA79 106 aaPredicted RBP3.75□□□□□ -1.81
PRDM1-201ENST00000369089 KRTAP19-5Q3LI72 72 aa3.71□□□□□ -1.82
PRDM1-201ENST00000369089 KRTAP19-8Q3LI54 63 aa3.69□□□□□ -1.82
PRDM1-201ENST00000369089 KRTAP19-4Q3LI73 84 aa3.69□□□□□ -1.82
PRDM1-201ENST00000369089 PCLOQ9Y6V0 5065 aa3.67□□□□□ -1.82
PRDM1-201ENST00000369089 HERC1Q15751 4861 aa3.67□□□□□ -1.82
PRDM1-201ENST00000369089 KRTAP9-8Q9BYQ0 159 aa3.66□□□□□ -1.82
PRDM1-201ENST00000369089 LPAP08519 4548 aa3.66□□□□□ -1.82
PRDM1-201ENST00000369089 EPPK1P58107 5090 aaKnown RBP3.63□□□□□ -1.83
PRDM1-201ENST00000369089 MT1BP07438 61 aa3.6□□□□□ -1.83
PRDM1-201ENST00000369089 KRTAP19-2Q3LHN2 52 aa3.6□□□□□ -1.83
PRDM1-201ENST00000369089 ABCA13Q86UQ4 5058 aa3.6□□□□□ -1.83
PRDM1-201ENST00000369089 KRTAP10-7P60409 375 aaPredicted RBP3.58□□□□□ -1.84
PRDM1-201ENST00000369089 MT1XP80297 61 aa3.58□□□□□ -1.84
PRDM1-201ENST00000369089 TNXBP22105 4242 aa3.57□□□□□ -1.84
PRDM1-201ENST00000369089 KRTAP9-3Q9BYQ3 159 aa3.55□□□□□ -1.84
PRDM1-201ENST00000369089 PKHD1L1Q86WI1 4243 aa3.54□□□□□ -1.84
PRDM1-201ENST00000369089 MUC17Q685J3 4493 aa3.53□□□□□ -1.84
PRDM1-201ENST00000369089 SPRR2FQ96RM1 72 aa3.51□□□□□ -1.85
PRDM1-201ENST00000369089 KRTAP2-3P0C7H8 128 aa3.46□□□□□ -1.86
PRDM1-201ENST00000369089 KRTAP2-4Q9BYR9 128 aa3.46□□□□□ -1.86
PRDM1-201ENST00000369089 KRTAP2-1Q9BYU5 128 aa3.46□□□□□ -1.86
PRDM1-201ENST00000369089 FLGP20930 4061 aaPredicted RBP3.45□□□□□ -1.86
PRDM1-201ENST00000369089 KRTAP4-8A0A0G2JLE6 195 aa3.43□□□□□ -1.86
PRDM1-201ENST00000369089 KRTAP4-8Q9BYQ9 185 aa3.43□□□□□ -1.86
PRDM1-201ENST00000369089 LCE3EQ5T5B0 92 aa3.41□□□□□ -1.86
PRDM1-201ENST00000369089 PRM1P04553 51 aa3.4□□□□□ -1.87
PRDM1-201ENST00000369089 LCE3DQ9BYE3 92 aa3.39□□□□□ -1.87
PRDM1-201ENST00000369089 UBR4Q5T4S7 5183 aa3.38□□□□□ -1.87
PRDM1-201ENST00000369089 FAT4Q6V0I7 4981 aa3.38□□□□□ -1.87
PRDM1-201ENST00000369089 RNF213Q63HN8 5207 aa3.38□□□□□ -1.87
PRDM1-201ENST00000369089 LCE3BQ5TA77 95 aa3.37□□□□□ -1.87
PRDM1-201ENST00000369089 LOC100996750A0A140TA64 210 aa3.34□□□□□ -1.88
PRDM1-201ENST00000369089 KRTAP4-6Q9BYQ5 205 aa3.34□□□□□ -1.88
PRDM1-201ENST00000369089 HMCN2Q8NDA2 5059 aa3.3□□□□□ -1.88
PRDM1-201ENST00000369089 MUC2Q02817 5179 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms