RNA–Protein interactions for RNA: ENST00000368905.8

SCNM1-202, Transcript of sodium channel modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCNM1, Length 2,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-202ENST00000368905 PKD1P98161 4303 aa5.38□□□□□ -1.55
SCNM1-202ENST00000368905 RPS29P62273 56 aaKnown RBP5.35□□□□□ -1.55
SCNM1-202ENST00000368905 IGKV2-30P06310 120 aa5.35□□□□□ -1.55
SCNM1-202ENST00000368905 INE1O15225 51 aa5.34□□□□□ -1.55
SCNM1-202ENST00000368905 KRTAP13-3Q3SY46 172 aa5.33□□□□□ -1.56
SCNM1-202ENST00000368905 LRP1BQ9NZR2 4599 aa5.32□□□□□ -1.56
SCNM1-202ENST00000368905 PKHD1P08F94 4074 aa5.32□□□□□ -1.56
SCNM1-202ENST00000368905 VPS13BQ7Z7G8 4022 aa5.31□□□□□ -1.56
SCNM1-202ENST00000368905 DYNC1H1Q14204 4646 aaKnown RBP5.29□□□□□ -1.56
SCNM1-202ENST00000368905 EPPK1P58107 5090 aaKnown RBP5.27□□□□□ -1.57
SCNM1-202ENST00000368905 PLAC4Q8WY50 150 aa5.26□□□□□ -1.57
SCNM1-202ENST00000368905 SMR3BP02814 79 aaPredicted RBP5.24□□□□□ -1.57
SCNM1-202ENST00000368905 APOBP04114 4563 aaKnown RBP5.22□□□□□ -1.57
SCNM1-202ENST00000368905 CRIPTQ9P021 101 aa5.21□□□□□ -1.57
SCNM1-202ENST00000368905 IGKV2D-30A0A075B6S6 120 aa5.19□□□□□ -1.58
SCNM1-202ENST00000368905 KRTAP10-4P60372 401 aaPredicted RBP5.18□□□□□ -1.58
SCNM1-202ENST00000368905 KRTAP10-8P60410 259 aa5.17□□□□□ -1.58
SCNM1-202ENST00000368905 BIRC6Q9NR09 4857 aa5.17□□□□□ -1.58
SCNM1-202ENST00000368905 HSPG2P98160 4391 aa5.16□□□□□ -1.58
SCNM1-202ENST00000368905 RYR1P21817 5038 aa5.14□□□□□ -1.59
SCNM1-202ENST00000368905 KIAA1109Q2LD37 5005 aa5.13□□□□□ -1.59
SCNM1-202ENST00000368905 Q5VSD8 79 aa5.12□□□□□ -1.59
SCNM1-202ENST00000368905 PKHD1L1Q86WI1 4243 aa5.11□□□□□ -1.59
SCNM1-202ENST00000368905 FAT1Q14517 4588 aa5.1□□□□□ -1.59
SCNM1-202ENST00000368905 C9orf92A6NGG3 77 aa5.09□□□□□ -1.59
SCNM1-202ENST00000368905 KRTAP17-1Q9BYP8 105 aa5.06□□□□□ -1.6
SCNM1-202ENST00000368905 HERC2O95714 4834 aa5.05□□□□□ -1.6
SCNM1-202ENST00000368905 FLG2Q5D862 2391 aaPredicted RBP5.04□□□□□ -1.6
SCNM1-202ENST00000368905 H0YAA0 97 aa5.02□□□□□ -1.61
SCNM1-202ENST00000368905 KRTAP4-5Q9BYR2 181 aa5.01□□□□□ -1.61
SCNM1-202ENST00000368905 KRTAP12-2P59991 146 aa4.98□□□□□ -1.61
SCNM1-202ENST00000368905 PP632Q6XCG6 107 aa4.96□□□□□ -1.62
SCNM1-202ENST00000368905 COX6B2Q6YFQ2 88 aa4.96□□□□□ -1.62
SCNM1-202ENST00000368905 RPL37P61927 97 aaKnown RBP4.94□□□□□ -1.62
SCNM1-202ENST00000368905 ABCA13Q86UQ4 5058 aa4.93□□□□□ -1.62
SCNM1-202ENST00000368905 TNXBP22105 4242 aa4.93□□□□□ -1.62
SCNM1-202ENST00000368905 DMBT1Q9UGM3 2413 aaPredicted RBP4.92□□□□□ -1.62
SCNM1-202ENST00000368905 XP32Q5T750 250 aa4.91□□□□□ -1.62
SCNM1-202ENST00000368905 FAT3Q8TDW7 4589 aa4.91□□□□□ -1.62
SCNM1-202ENST00000368905 MYCBP2O75592 4640 aa4.9□□□□□ -1.63
SCNM1-202ENST00000368905 LRP1Q07954 4544 aaKnown RBP4.89□□□□□ -1.63
SCNM1-202ENST00000368905 C10orf95Q9H7T3 257 aa4.87□□□□□ -1.63
SCNM1-202ENST00000368905 MT1HL1P0DM35 61 aa4.86□□□□□ -1.63
SCNM1-202ENST00000368905 PCLOQ9Y6V0 5065 aa4.85□□□□□ -1.63
SCNM1-202ENST00000368905 H1FX-AS1Q4G0G2 97 aa4.81□□□□□ -1.64
SCNM1-202ENST00000368905 KRTAP19-4Q3LI73 84 aa4.79□□□□□ -1.64
SCNM1-202ENST00000368905 S4R3F8 94 aa4.79□□□□□ -1.64
SCNM1-202ENST00000368905 HERC1Q15751 4861 aa4.69□□□□□ -1.66
SCNM1-202ENST00000368905 KRTAP10-6P60371 365 aaPredicted RBP4.66□□□□□ -1.66
SCNM1-202ENST00000368905 LCE5AQ5TCM9 118 aa4.65□□□□□ -1.67
SCNM1-202ENST00000368905 HMCN2Q8NDA2 5059 aa4.6□□□□□ -1.67
SCNM1-202ENST00000368905 LOC100996750A0A140TA64 210 aa4.6□□□□□ -1.67
SCNM1-202ENST00000368905 KRTAP4-6Q9BYQ5 205 aa4.6□□□□□ -1.67
SCNM1-202ENST00000368905 LRP2P98164 4655 aa4.57□□□□□ -1.68
SCNM1-202ENST00000368905 KRTAP2-2Q9BYT5 123 aa4.57□□□□□ -1.68
SCNM1-202ENST00000368905 M0QZ58 72 aa4.56□□□□□ -1.68
SCNM1-202ENST00000368905 LPAP08519 4548 aa4.56□□□□□ -1.68
SCNM1-202ENST00000368905 A0A0D9SG42 100 aa4.55□□□□□ -1.68
SCNM1-202ENST00000368905 KRTAP13-4Q3LI77 160 aa4.55□□□□□ -1.68
SCNM1-202ENST00000368905 SPRR5A0A1B0GTR4 108 aa4.5□□□□□ -1.69
SCNM1-202ENST00000368905 MUC17Q685J3 4493 aa4.44□□□□□ -1.7
SCNM1-202ENST00000368905 KRTAP12-1P59990 96 aa4.43□□□□□ -1.7
SCNM1-202ENST00000368905 KRTAP4-1Q9BYQ7 146 aa4.41□□□□□ -1.7
SCNM1-202ENST00000368905 UBR4Q5T4S7 5183 aa4.4□□□□□ -1.7
SCNM1-202ENST00000368905 KRTAP9-4Q9BYQ2 154 aa4.36□□□□□ -1.71
SCNM1-202ENST00000368905 KRTAP19-2Q3LHN2 52 aa4.35□□□□□ -1.71
SCNM1-202ENST00000368905 RNF213Q63HN8 5207 aa4.33□□□□□ -1.72
SCNM1-202ENST00000368905 FLGP20930 4061 aaPredicted RBP4.31□□□□□ -1.72
SCNM1-202ENST00000368905 MUC2Q02817 5179 aa4.3□□□□□ -1.72
SCNM1-202ENST00000368905 LCE1FQ5T754 118 aa4.2□□□□□ -1.74
SCNM1-202ENST00000368905 MT3P25713 68 aa4.19□□□□□ -1.74
SCNM1-202ENST00000368905 FAT4Q6V0I7 4981 aa4.17□□□□□ -1.74
SCNM1-202ENST00000368905 M0R2T5 61 aa4.14□□□□□ -1.75
SCNM1-202ENST00000368905 KRTAP4-8Q9BYQ9 185 aa4.12□□□□□ -1.75
SCNM1-202ENST00000368905 MT1HP80294 61 aa4.11□□□□□ -1.75
SCNM1-202ENST00000368905 SPRR2GQ9BYE4 73 aa4.08□□□□□ -1.76
SCNM1-202ENST00000368905 KRTAP9-9Q9BYP9 154 aa4.06□□□□□ -1.76
SCNM1-202ENST00000368905 TNP1P09430 55 aa4.05□□□□□ -1.76
SCNM1-202ENST00000368905 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.04□□□□□ -1.76
SCNM1-202ENST00000368905 KRTAP9-2Q9BYQ4 174 aa4.04□□□□□ -1.76
SCNM1-202ENST00000368905 KRTAP9-6A0A140TA67 174 aa4.02□□□□□ -1.77
SCNM1-202ENST00000368905 KRTAP10-10P60014 251 aa4□□□□□ -1.77
SCNM1-202ENST00000368905 LCE1AQ5T7P2 110 aa4□□□□□ -1.77
SCNM1-202ENST00000368905 KRTAP19-1Q8IUB9 90 aa3.99□□□□□ -1.77
SCNM1-202ENST00000368905 MT2AP02795 61 aa3.98□□□□□ -1.77
SCNM1-202ENST00000368905 KRTAP9-7A8MTY7 169 aa3.97□□□□□ -1.77
SCNM1-202ENST00000368905 MT1FP04733 61 aa3.95□□□□□ -1.78
SCNM1-202ENST00000368905 LCE3BQ5TA77 95 aa3.95□□□□□ -1.78
SCNM1-202ENST00000368905 KRTAP9-8Q9BYQ0 159 aa3.95□□□□□ -1.78
SCNM1-202ENST00000368905 KRTAP19-8Q3LI54 63 aa3.92□□□□□ -1.78
SCNM1-202ENST00000368905 KRTAP6-3Q3LI67 103 aa3.88□□□□□ -1.79
SCNM1-202ENST00000368905 LCE1EQ5T753 118 aa3.88□□□□□ -1.79
SCNM1-202ENST00000368905 LCE3CQ5T5A8 94 aa3.85□□□□□ -1.79
SCNM1-202ENST00000368905 KRTAP4-8A0A0G2JLE6 195 aa3.84□□□□□ -1.79
SCNM1-202ENST00000368905 KRTAP4-12Q9BQ66 201 aa3.83□□□□□ -1.8
SCNM1-202ENST00000368905 LCE4AQ5TA78 99 aa3.82□□□□□ -1.8
SCNM1-202ENST00000368905 MT1BP07438 61 aa3.8□□□□□ -1.8
SCNM1-202ENST00000368905 KRTAP9-3Q9BYQ3 159 aa3.8□□□□□ -1.8
SCNM1-202ENST00000368905 KRTAP12-4P60329 112 aa3.77□□□□□ -1.81
SCNM1-202ENST00000368905 KRTAP10-5P60370 271 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms