RNA–Protein interactions for RNA: ENST00000368571.2

KNDC1-202, Transcript of kinase non-catalytic C-lobe domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene KNDC1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNDC1-202ENST00000368571 KRTAP3-3Q9BYR6 98 aa6.5□□□□□ -1.37
KNDC1-202ENST00000368571 KRTAP10-8P60410 259 aa6.49□□□□□ -1.37
KNDC1-202ENST00000368571 Q5VSD8 79 aa6.49□□□□□ -1.37
KNDC1-202ENST00000368571 KRTAP3-2Q9BYR7 98 aa6.49□□□□□ -1.37
KNDC1-202ENST00000368571 DNAH6Q9C0G6 4158 aa6.48□□□□□ -1.37
KNDC1-202ENST00000368571 KRTAP12-1P59990 96 aa6.46□□□□□ -1.37
KNDC1-202ENST00000368571 SEC61BP60468 96 aaKnown RBP6.44□□□□□ -1.38
KNDC1-202ENST00000368571 DYNC2H1Q8NCM8 4307 aaKnown RBP6.44□□□□□ -1.38
KNDC1-202ENST00000368571 PLAC4Q8WY50 150 aa6.44□□□□□ -1.38
KNDC1-202ENST00000368571 KRTAP21-3Q3LHN1 58 aa6.42□□□□□ -1.38
KNDC1-202ENST00000368571 VPS13BQ7Z7G8 4022 aa6.41□□□□□ -1.38
KNDC1-202ENST00000368571 DNAH5Q8TE73 4624 aa6.41□□□□□ -1.38
KNDC1-202ENST00000368571 J3QL48 77 aa6.36□□□□□ -1.39
KNDC1-202ENST00000368571 FAT1Q14517 4588 aa6.36□□□□□ -1.39
KNDC1-202ENST00000368571 A0A1B0GVY2 172 aa6.29□□□□□ -1.4
KNDC1-202ENST00000368571 KRTAP10-4P60372 401 aaPredicted RBP6.29□□□□□ -1.4
KNDC1-202ENST00000368571 MYCBP2O75592 4640 aa6.22□□□□□ -1.41
KNDC1-202ENST00000368571 SACSQ9NZJ4 4579 aa6.21□□□□□ -1.42
KNDC1-202ENST00000368571 DYNC1H1Q14204 4646 aaKnown RBP6.21□□□□□ -1.42
KNDC1-202ENST00000368571 HYDINQ4G0P3 5121 aa6.13□□□□□ -1.43
KNDC1-202ENST00000368571 PP632Q6XCG6 107 aa6.13□□□□□ -1.43
KNDC1-202ENST00000368571 PKHD1P08F94 4074 aa6.07□□□□□ -1.44
KNDC1-202ENST00000368571 APOBP04114 4563 aaKnown RBP6.07□□□□□ -1.44
KNDC1-202ENST00000368571 FAT2Q9NYQ8 4349 aa6.04□□□□□ -1.44
KNDC1-202ENST00000368571 PKD1P98161 4303 aa6.03□□□□□ -1.44
KNDC1-202ENST00000368571 LRP1Q07954 4544 aaKnown RBP6.03□□□□□ -1.44
KNDC1-202ENST00000368571 TNP1P09430 55 aa6.03□□□□□ -1.44
KNDC1-202ENST00000368571 M0R2T5 61 aa6.01□□□□□ -1.45
KNDC1-202ENST00000368571 MT1HL1P0DM35 61 aa5.97□□□□□ -1.45
KNDC1-202ENST00000368571 LORP23490 312 aaPredicted RBP5.95□□□□□ -1.46
KNDC1-202ENST00000368571 FAT3Q8TDW7 4589 aa5.95□□□□□ -1.46
KNDC1-202ENST00000368571 KIAA1109Q2LD37 5005 aa5.94□□□□□ -1.46
KNDC1-202ENST00000368571 HSPG2P98160 4391 aa5.89□□□□□ -1.47
KNDC1-202ENST00000368571 KMT2CQ8NEZ4 4911 aaKnown RBP5.88□□□□□ -1.47
KNDC1-202ENST00000368571 RYR1P21817 5038 aa5.88□□□□□ -1.47
KNDC1-202ENST00000368571 KRTAP4-5Q9BYR2 181 aa5.84□□□□□ -1.47
KNDC1-202ENST00000368571 RYR3Q15413 4870 aa5.83□□□□□ -1.48
KNDC1-202ENST00000368571 LRP2P98164 4655 aa5.82□□□□□ -1.48
KNDC1-202ENST00000368571 PKHD1L1Q86WI1 4243 aa5.78□□□□□ -1.48
KNDC1-202ENST00000368571 PRO2289Q9P1D8 64 aa5.78□□□□□ -1.48
KNDC1-202ENST00000368571 RYR2Q92736 4967 aa5.71□□□□□ -1.5
KNDC1-202ENST00000368571 KRTAP17-1Q9BYP8 105 aa5.67□□□□□ -1.5
KNDC1-202ENST00000368571 TNXBP22105 4242 aa5.63□□□□□ -1.51
KNDC1-202ENST00000368571 KRTAP4-1Q9BYQ7 146 aa5.62□□□□□ -1.51
KNDC1-202ENST00000368571 LPAP08519 4548 aa5.6□□□□□ -1.51
KNDC1-202ENST00000368571 KRTAP23-1A1A580 65 aa5.52□□□□□ -1.53
KNDC1-202ENST00000368571 INE1O15225 51 aa5.52□□□□□ -1.53
KNDC1-202ENST00000368571 EPPK1P58107 5090 aaKnown RBP5.5□□□□□ -1.53
KNDC1-202ENST00000368571 KRTAP10-10P60014 251 aa5.5□□□□□ -1.53
KNDC1-202ENST00000368571 HERC2O95714 4834 aa5.46□□□□□ -1.54
KNDC1-202ENST00000368571 LCE3AQ5TA76 89 aa5.42□□□□□ -1.54
KNDC1-202ENST00000368571 SPRR5A0A1B0GTR4 108 aa5.34□□□□□ -1.56
KNDC1-202ENST00000368571 ABCA13Q86UQ4 5058 aa5.31□□□□□ -1.56
KNDC1-202ENST00000368571 MUC2Q02817 5179 aa5.26□□□□□ -1.57
KNDC1-202ENST00000368571 KRTAP12-3P60328 96 aa5.23□□□□□ -1.57
KNDC1-202ENST00000368571 KRTAP19-2Q3LHN2 52 aa5.23□□□□□ -1.57
KNDC1-202ENST00000368571 SPRR2GQ9BYE4 73 aa5.21□□□□□ -1.57
KNDC1-202ENST00000368571 KRTAP10-12P60413 245 aa5.19□□□□□ -1.58
KNDC1-202ENST00000368571 HERC1Q15751 4861 aa5.18□□□□□ -1.58
KNDC1-202ENST00000368571 MUC17Q685J3 4493 aa5.17□□□□□ -1.58
KNDC1-202ENST00000368571 KRTAP19-1Q8IUB9 90 aa5.16□□□□□ -1.58
KNDC1-202ENST00000368571 BIRC6Q9NR09 4857 aa5.15□□□□□ -1.58
KNDC1-202ENST00000368571 KRTAP8-1Q8IUC2 63 aa5.12□□□□□ -1.59
KNDC1-202ENST00000368571 RNF213Q63HN8 5207 aa5.12□□□□□ -1.59
KNDC1-202ENST00000368571 FLGP20930 4061 aaPredicted RBP5.1□□□□□ -1.59
KNDC1-202ENST00000368571 PCLOQ9Y6V0 5065 aa5.08□□□□□ -1.6
KNDC1-202ENST00000368571 FAT4Q6V0I7 4981 aa5.08□□□□□ -1.6
KNDC1-202ENST00000368571 MT1FP04733 61 aa5.04□□□□□ -1.6
KNDC1-202ENST00000368571 MT2AP02795 61 aa5.03□□□□□ -1.6
KNDC1-202ENST00000368571 MT1HP80294 61 aa5.01□□□□□ -1.61
KNDC1-202ENST00000368571 UBR4Q5T4S7 5183 aa4.98□□□□□ -1.61
KNDC1-202ENST00000368571 LCE2CQ5TA81 110 aa4.95□□□□□ -1.62
KNDC1-202ENST00000368571 KRTAP10-5P60370 271 aa4.89□□□□□ -1.63
KNDC1-202ENST00000368571 MT1XP80297 61 aa4.89□□□□□ -1.63
KNDC1-202ENST00000368571 KRTAP10-7P60409 375 aaPredicted RBP4.89□□□□□ -1.63
KNDC1-202ENST00000368571 KRTAP19-8Q3LI54 63 aa4.88□□□□□ -1.63
KNDC1-202ENST00000368571 CRCT1Q9UGL9 99 aa4.86□□□□□ -1.63
KNDC1-202ENST00000368571 MT1BP07438 61 aa4.84□□□□□ -1.63
KNDC1-202ENST00000368571 HMCN2Q8NDA2 5059 aa4.83□□□□□ -1.64
KNDC1-202ENST00000368571 FSIP2Q5CZC0 6907 aa4.83□□□□□ -1.64
KNDC1-202ENST00000368571 KRTAP9-8Q9BYQ0 159 aa4.82□□□□□ -1.64
KNDC1-202ENST00000368571 KRTAP19-5Q3LI72 72 aa4.81□□□□□ -1.64
KNDC1-202ENST00000368571 LCE3CQ5T5A8 94 aa4.81□□□□□ -1.64
KNDC1-202ENST00000368571 OBSCNQ5VST9 7968 aa4.73□□□□□ -1.65
KNDC1-202ENST00000368571 KRTAP9-3Q9BYQ3 159 aa4.61□□□□□ -1.67
KNDC1-202ENST00000368571 KRTAP4-8A0A0G2JLE6 195 aa4.6□□□□□ -1.67
KNDC1-202ENST00000368571 KRTAP4-8Q9BYQ9 185 aa4.6□□□□□ -1.67
KNDC1-202ENST00000368571 SYNE1Q8NF91 8797 aaKnown RBP4.57□□□□□ -1.68
KNDC1-202ENST00000368571 KMT2DO14686 5537 aa4.57□□□□□ -1.68
KNDC1-202ENST00000368571 USH2AO75445 5202 aa4.55□□□□□ -1.68
KNDC1-202ENST00000368571 KRTAP4-7Q9BYR0 210 aa4.55□□□□□ -1.68
KNDC1-202ENST00000368571 KRTAP9-6A8MVA2 160 aa4.44□□□□□ -1.7
KNDC1-202ENST00000368571 DSTQ03001 7570 aaKnown RBP4.43□□□□□ -1.7
KNDC1-202ENST00000368571 LCE2BO14633 110 aa4.42□□□□□ -1.7
KNDC1-202ENST00000368571 FCGBPQ9Y6R7 5405 aaPredicted RBP4.4□□□□□ -1.71
KNDC1-202ENST00000368571 KRTAP2-3P0C7H8 128 aa4.36□□□□□ -1.71
KNDC1-202ENST00000368571 KRTAP2-4Q9BYR9 128 aa4.36□□□□□ -1.71
KNDC1-202ENST00000368571 KRTAP2-1Q9BYU5 128 aa4.36□□□□□ -1.71
KNDC1-202ENST00000368571 KRTAP19-4Q3LI73 84 aa4.33□□□□□ -1.72
KNDC1-202ENST00000368571 KRTAP12-4P60329 112 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms