RNA–Protein interactions for RNA: ENST00000368449.8

SHC1-203, Transcript of SHC adaptor protein 1, humanhuman

TSL 5 BASIC

Gene SHC1, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-203ENST00000368449 RYR3Q15413 4870 aa6.59□□□□□ -1.36
SHC1-203ENST00000368449 KRTAP3-3Q9BYR6 98 aa6.59□□□□□ -1.36
SHC1-203ENST00000368449 KRTAP3-2Q9BYR7 98 aa6.59□□□□□ -1.36
SHC1-203ENST00000368449 COX6B2Q6YFQ2 88 aa6.58□□□□□ -1.36
SHC1-203ENST00000368449 FAT3Q8TDW7 4589 aa6.58□□□□□ -1.36
SHC1-203ENST00000368449 HSPG2P98160 4391 aa6.56□□□□□ -1.36
SHC1-203ENST00000368449 DMBT1Q9UGM3 2413 aaPredicted RBP6.55□□□□□ -1.36
SHC1-203ENST00000368449 K7ERS5 55 aa6.55□□□□□ -1.36
SHC1-203ENST00000368449 TNXBP22105 4242 aa6.54□□□□□ -1.36
SHC1-203ENST00000368449 MYCBP2O75592 4640 aa6.53□□□□□ -1.36
SHC1-203ENST00000368449 KRTAP10-8P60410 259 aa6.47□□□□□ -1.37
SHC1-203ENST00000368449 TPRXLQ17RH7 258 aa6.47□□□□□ -1.37
SHC1-203ENST00000368449 KRTAP10-6P60371 365 aaPredicted RBP6.46□□□□□ -1.38
SHC1-203ENST00000368449 SPINT4Q6UDR6 99 aa6.45□□□□□ -1.38
SHC1-203ENST00000368449 A0A0D9SG42 100 aa6.44□□□□□ -1.38
SHC1-203ENST00000368449 A0A0A0MQY5 61 aa6.43□□□□□ -1.38
SHC1-203ENST00000368449 KRTAP13-4Q3LI77 160 aa6.43□□□□□ -1.38
SHC1-203ENST00000368449 C10orf95Q9H7T3 257 aa6.43□□□□□ -1.38
SHC1-203ENST00000368449 RPL37P61927 97 aaKnown RBP6.42□□□□□ -1.38
SHC1-203ENST00000368449 XP32Q5T750 250 aa6.39□□□□□ -1.39
SHC1-203ENST00000368449 KRTAP17-1Q9BYP8 105 aa6.39□□□□□ -1.39
SHC1-203ENST00000368449 EPPK1P58107 5090 aaKnown RBP6.37□□□□□ -1.39
SHC1-203ENST00000368449 NDUFAF8A1L188 74 aa6.36□□□□□ -1.39
SHC1-203ENST00000368449 Q5VSD8 79 aa6.36□□□□□ -1.39
SHC1-203ENST00000368449 KIAA1109Q2LD37 5005 aa6.36□□□□□ -1.39
SHC1-203ENST00000368449 LPAP08519 4548 aa6.34□□□□□ -1.4
SHC1-203ENST00000368449 S4R3F8 94 aa6.33□□□□□ -1.4
SHC1-203ENST00000368449 KRTAP15-1Q3LI76 137 aa6.32□□□□□ -1.4
SHC1-203ENST00000368449 RYR1P21817 5038 aa6.32□□□□□ -1.4
SHC1-203ENST00000368449 LRP2P98164 4655 aa6.26□□□□□ -1.41
SHC1-203ENST00000368449 MT1HL1P0DM35 61 aa6.25□□□□□ -1.41
SHC1-203ENST00000368449 KRTAP12-2P59991 146 aa6.24□□□□□ -1.41
SHC1-203ENST00000368449 J3QL48 77 aa6.13□□□□□ -1.43
SHC1-203ENST00000368449 KRTAP12-1P59990 96 aa6.13□□□□□ -1.43
SHC1-203ENST00000368449 ABCA13Q86UQ4 5058 aa6.11□□□□□ -1.43
SHC1-203ENST00000368449 KRTAP4-5Q9BYR2 181 aa6.09□□□□□ -1.43
SHC1-203ENST00000368449 M0QZ58 72 aa6.01□□□□□ -1.45
SHC1-203ENST00000368449 BIRC6Q9NR09 4857 aa5.95□□□□□ -1.46
SHC1-203ENST00000368449 HERC2O95714 4834 aa5.95□□□□□ -1.46
SHC1-203ENST00000368449 MUC17Q685J3 4493 aa5.93□□□□□ -1.46
SHC1-203ENST00000368449 LORP23490 312 aaPredicted RBP5.92□□□□□ -1.46
SHC1-203ENST00000368449 KRTAP4-1Q9BYQ7 146 aa5.9□□□□□ -1.47
SHC1-203ENST00000368449 R4GN34 69 aa5.89□□□□□ -1.47
SHC1-203ENST00000368449 PLAC4Q8WY50 150 aa5.87□□□□□ -1.47
SHC1-203ENST00000368449 PCLOQ9Y6V0 5065 aa5.86□□□□□ -1.47
SHC1-203ENST00000368449 LUZP6Q538Z0 58 aa5.81□□□□□ -1.48
SHC1-203ENST00000368449 LCE2BO14633 110 aa5.81□□□□□ -1.48
SHC1-203ENST00000368449 SEC61BP60468 96 aaKnown RBP5.81□□□□□ -1.48
SHC1-203ENST00000368449 KRTAP19-2Q3LHN2 52 aa5.78□□□□□ -1.48
SHC1-203ENST00000368449 MUC2Q02817 5179 aa5.78□□□□□ -1.48
SHC1-203ENST00000368449 HERC1Q15751 4861 aa5.75□□□□□ -1.49
SHC1-203ENST00000368449 FLGP20930 4061 aaPredicted RBP5.62□□□□□ -1.51
SHC1-203ENST00000368449 CAMK2N1Q7Z7J9 78 aa5.6□□□□□ -1.51
SHC1-203ENST00000368449 HMCN2Q8NDA2 5059 aa5.55□□□□□ -1.52
SHC1-203ENST00000368449 PP632Q6XCG6 107 aa5.55□□□□□ -1.52
SHC1-203ENST00000368449 FAT4Q6V0I7 4981 aa5.49□□□□□ -1.53
SHC1-203ENST00000368449 RNF213Q63HN8 5207 aa5.48□□□□□ -1.53
SHC1-203ENST00000368449 LCE2CQ5TA81 110 aa5.48□□□□□ -1.53
SHC1-203ENST00000368449 UBR4Q5T4S7 5183 aa5.47□□□□□ -1.53
SHC1-203ENST00000368449 TNP1P09430 55 aa5.37□□□□□ -1.55
SHC1-203ENST00000368449 SPRR5A0A1B0GTR4 108 aa5.36□□□□□ -1.55
SHC1-203ENST00000368449 KRTAP19-1Q8IUB9 90 aa5.32□□□□□ -1.56
SHC1-203ENST00000368449 SPRR2GQ9BYE4 73 aa5.29□□□□□ -1.56
SHC1-203ENST00000368449 LCE2AQ5TA79 106 aaPredicted RBP5.28□□□□□ -1.56
SHC1-203ENST00000368449 KRTAP23-1A1A580 65 aa5.27□□□□□ -1.57
SHC1-203ENST00000368449 M0R2T5 61 aa5.21□□□□□ -1.58
SHC1-203ENST00000368449 MT1HP80294 61 aa5.21□□□□□ -1.58
SHC1-203ENST00000368449 MT1FP04733 61 aa5.19□□□□□ -1.58
SHC1-203ENST00000368449 MT2AP02795 61 aa5.16□□□□□ -1.58
SHC1-203ENST00000368449 LCE3AQ5TA76 89 aa5.16□□□□□ -1.58
SHC1-203ENST00000368449 KRTAP10-10P60014 251 aa5.14□□□□□ -1.59
SHC1-203ENST00000368449 KRTAP9-8Q9BYQ0 159 aa5.12□□□□□ -1.59
SHC1-203ENST00000368449 PRO2289Q9P1D8 64 aa5.1□□□□□ -1.59
SHC1-203ENST00000368449 KRTAP19-8Q3LI54 63 aa5.04□□□□□ -1.6
SHC1-203ENST00000368449 MT1BP07438 61 aa5.02□□□□□ -1.61
SHC1-203ENST00000368449 KRTAP10-5P60370 271 aa5.02□□□□□ -1.61
SHC1-203ENST00000368449 MT1XP80297 61 aa5.01□□□□□ -1.61
SHC1-203ENST00000368449 KRTAP8-1Q8IUC2 63 aa4.99□□□□□ -1.61
SHC1-203ENST00000368449 INE1O15225 51 aa4.95□□□□□ -1.62
SHC1-203ENST00000368449 KRTAP10-7P60409 375 aaPredicted RBP4.9□□□□□ -1.63
SHC1-203ENST00000368449 KRTAP9-3Q9BYQ3 159 aa4.9□□□□□ -1.63
SHC1-203ENST00000368449 KRTAP10-12P60413 245 aa4.89□□□□□ -1.63
SHC1-203ENST00000368449 KRTAP12-3P60328 96 aa4.88□□□□□ -1.63
SHC1-203ENST00000368449 USH2AO75445 5202 aa4.77□□□□□ -1.65
SHC1-203ENST00000368449 KMT2DO14686 5537 aa4.74□□□□□ -1.65
SHC1-203ENST00000368449 KRTAP19-5Q3LI72 72 aa4.69□□□□□ -1.66
SHC1-203ENST00000368449 FSIP2Q5CZC0 6907 aa4.65□□□□□ -1.67
SHC1-203ENST00000368449 KRTAP4-8A0A0G2JLE6 195 aa4.62□□□□□ -1.67
SHC1-203ENST00000368449 KRTAP4-8Q9BYQ9 185 aa4.62□□□□□ -1.67
SHC1-203ENST00000368449 LCE3CQ5T5A8 94 aa4.6□□□□□ -1.67
SHC1-203ENST00000368449 KRTAP9-6A8MVA2 160 aa4.53□□□□□ -1.68
SHC1-203ENST00000368449 KRTAP4-7Q9BYR0 210 aa4.47□□□□□ -1.69
SHC1-203ENST00000368449 KRTAP19-7Q3SYF9 63 aa4.47□□□□□ -1.69
SHC1-203ENST00000368449 LOC100996750A0A140TA64 210 aa4.44□□□□□ -1.7
SHC1-203ENST00000368449 KRTAP4-6Q9BYQ5 205 aa4.44□□□□□ -1.7
SHC1-203ENST00000368449 SSPOA2VEC9 5147 aa4.42□□□□□ -1.7
SHC1-203ENST00000368449 KRTAP2-3P0C7H8 128 aa4.34□□□□□ -1.71
SHC1-203ENST00000368449 KRTAP2-4Q9BYR9 128 aa4.34□□□□□ -1.71
SHC1-203ENST00000368449 KRTAP2-1Q9BYU5 128 aa4.34□□□□□ -1.71
SHC1-203ENST00000368449 MT1LQ93083 61 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms