RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 KRTAP19-4Q3LI73 84 aa3.69□□□□□ -1.82
SSR2-202ENST00000368311 KRTAP3-1Q9BYR8 98 aa3.69□□□□□ -1.82
SSR2-202ENST00000368311 SVEP1Q4LDE5 3571 aa3.69□□□□□ -1.82
SSR2-202ENST00000368311 VPS13DQ5THJ4 4388 aa3.68□□□□□ -1.82
SSR2-202ENST00000368311 DNAH17Q9UFH2 4485 aa3.68□□□□□ -1.82
SSR2-202ENST00000368311 KRTAP10-12P60413 245 aa3.67□□□□□ -1.82
SSR2-202ENST00000368311 KRTAP3-3Q9BYR6 98 aa3.66□□□□□ -1.82
SSR2-202ENST00000368311 KRTAP3-2Q9BYR7 98 aa3.66□□□□□ -1.82
SSR2-202ENST00000368311 PLECQ15149 4684 aaKnown RBP3.66□□□□□ -1.82
SSR2-202ENST00000368311 SMG1Q96Q15 3661 aaKnown RBP3.66□□□□□ -1.82
SSR2-202ENST00000368311 KRTAP8-1Q8IUC2 63 aa3.65□□□□□ -1.82
SSR2-202ENST00000368311 HSPG2P98160 4391 aa3.65□□□□□ -1.83
SSR2-202ENST00000368311 ZNF469Q96JG9 3925 aaPredicted RBP3.63□□□□□ -1.83
SSR2-202ENST00000368311 TGP01266 2768 aa3.62□□□□□ -1.83
SSR2-202ENST00000368311 INE1O15225 51 aa3.62□□□□□ -1.83
SSR2-202ENST00000368311 VPS13CQ709C8 3753 aa3.62□□□□□ -1.83
SSR2-202ENST00000368311 DNAH8Q96JB1 4490 aa3.61□□□□□ -1.83
SSR2-202ENST00000368311 KRTAP12-1P59990 96 aa3.61□□□□□ -1.83
SSR2-202ENST00000368311 FAT2Q9NYQ8 4349 aa3.6□□□□□ -1.83
SSR2-202ENST00000368311 DNAH5Q8TE73 4624 aa3.6□□□□□ -1.83
SSR2-202ENST00000368311 MEGF8Q7Z7M0 2845 aa3.59□□□□□ -1.83
SSR2-202ENST00000368311 DNAH7Q8WXX0 4024 aa3.58□□□□□ -1.84
SSR2-202ENST00000368311 MT2AP02795 61 aa3.58□□□□□ -1.84
SSR2-202ENST00000368311 KRTAP17-1Q9BYP8 105 aa3.57□□□□□ -1.84
SSR2-202ENST00000368311 SPRR2GQ9BYE4 73 aa3.56□□□□□ -1.84
SSR2-202ENST00000368311 KRTAP12-2P59991 146 aa3.56□□□□□ -1.84
SSR2-202ENST00000368311 SRRM2Q9UQ35 2752 aaKnown RBP3.54□□□□□ -1.84
SSR2-202ENST00000368311 TRRAPQ9Y4A5 3859 aa3.54□□□□□ -1.84
SSR2-202ENST00000368311 SACSQ9NZJ4 4579 aa3.53□□□□□ -1.84
SSR2-202ENST00000368311 APOBP04114 4563 aaKnown RBP3.52□□□□□ -1.85
SSR2-202ENST00000368311 RYR2Q92736 4967 aa3.51□□□□□ -1.85
SSR2-202ENST00000368311 DNHD1Q96M86 4753 aa3.5□□□□□ -1.85
SSR2-202ENST00000368311 PKHD1L1Q86WI1 4243 aa3.5□□□□□ -1.85
SSR2-202ENST00000368311 KRTAP4-1Q9BYQ7 146 aa3.5□□□□□ -1.85
SSR2-202ENST00000368311 CUBNO60494 3623 aa3.49□□□□□ -1.85
SSR2-202ENST00000368311 RYR1P21817 5038 aa3.49□□□□□ -1.85
SSR2-202ENST00000368311 FAT1Q14517 4588 aa3.48□□□□□ -1.85
SSR2-202ENST00000368311 PRKDCP78527 4128 aaKnown RBP3.47□□□□□ -1.85
SSR2-202ENST00000368311 CRCT1Q9UGL9 99 aa3.47□□□□□ -1.85
SSR2-202ENST00000368311 LORP23490 312 aaPredicted RBP3.46□□□□□ -1.86
SSR2-202ENST00000368311 KRTAP12-3P60328 96 aa3.43□□□□□ -1.86
SSR2-202ENST00000368311 MT1FP04733 61 aa3.42□□□□□ -1.86
SSR2-202ENST00000368311 STARD9Q9P2P6 4700 aa3.42□□□□□ -1.86
SSR2-202ENST00000368311 KRTAP19-8Q3LI54 63 aa3.42□□□□□ -1.86
SSR2-202ENST00000368311 LCE2AQ5TA79 106 aaPredicted RBP3.41□□□□□ -1.86
SSR2-202ENST00000368311 LCE2CQ5TA81 110 aa3.41□□□□□ -1.86
SSR2-202ENST00000368311 KRTAP9-6A0A140TA67 174 aa3.4□□□□□ -1.86
SSR2-202ENST00000368311 PCLOQ9Y6V0 5065 aa3.4□□□□□ -1.87
SSR2-202ENST00000368311 RYR3Q15413 4870 aa3.39□□□□□ -1.87
SSR2-202ENST00000368311 KRTAP10-5P60370 271 aa3.38□□□□□ -1.87
SSR2-202ENST00000368311 SPRR2FQ96RM1 72 aa3.38□□□□□ -1.87
SSR2-202ENST00000368311 KRTAP10-7P60409 375 aaPredicted RBP3.37□□□□□ -1.87
SSR2-202ENST00000368311 KRTAP9-2Q9BYQ4 174 aa3.37□□□□□ -1.87
SSR2-202ENST00000368311 HERC2O95714 4834 aa3.37□□□□□ -1.87
SSR2-202ENST00000368311 LCE2BO14633 110 aa3.36□□□□□ -1.87
SSR2-202ENST00000368311 FAT3Q8TDW7 4589 aa3.36□□□□□ -1.87
SSR2-202ENST00000368311 FRAS1Q86XX4 4008 aa3.36□□□□□ -1.87
SSR2-202ENST00000368311 VPS13BQ7Z7G8 4022 aa3.36□□□□□ -1.87
SSR2-202ENST00000368311 SPRR2EP22531 72 aa3.35□□□□□ -1.87
SSR2-202ENST00000368311 SPRR2BP35325 72 aa3.35□□□□□ -1.87
SSR2-202ENST00000368311 SPRR2AP35326 72 aa3.35□□□□□ -1.87
SSR2-202ENST00000368311 MUC17Q685J3 4493 aa3.32□□□□□ -1.88
SSR2-202ENST00000368311 KMT2CQ8NEZ4 4911 aaKnown RBP3.31□□□□□ -1.88
SSR2-202ENST00000368311 SPRR2DP22532 72 aa3.3□□□□□ -1.88
SSR2-202ENST00000368311 HECTD4Q9Y4D8 3996 aa3.29□□□□□ -1.88
SSR2-202ENST00000368311 COL7A1Q02388 2944 aa3.29□□□□□ -1.88
SSR2-202ENST00000368311 KRTAP19-1Q8IUB9 90 aa3.28□□□□□ -1.88
SSR2-202ENST00000368311 LCE3AQ5TA76 89 aa3.27□□□□□ -1.89
SSR2-202ENST00000368311 KMT2AQ03164 3969 aa3.27□□□□□ -1.89
SSR2-202ENST00000368311 LYSTQ99698 3801 aa3.26□□□□□ -1.89
SSR2-202ENST00000368311 KRTAP9-8Q9BYQ0 159 aa3.25□□□□□ -1.89
SSR2-202ENST00000368311 KRTAP19-6Q3LI70 58 aa3.24□□□□□ -1.89
SSR2-202ENST00000368311 KRTAP9-3Q9BYQ3 159 aa3.24□□□□□ -1.89
SSR2-202ENST00000368311 PKD1P98161 4303 aa3.24□□□□□ -1.89
SSR2-202ENST00000368311 CSMD3Q7Z407 3707 aa3.23□□□□□ -1.89
SSR2-202ENST00000368311 LRP1Q07954 4544 aaKnown RBP3.22□□□□□ -1.89
SSR2-202ENST00000368311 PKHD1P08F94 4074 aa3.22□□□□□ -1.89
SSR2-202ENST00000368311 KRTAP6-3Q3LI67 103 aa3.14□□□□□ -1.91
SSR2-202ENST00000368311 MT1GP13640 62 aa3.13□□□□□ -1.91
SSR2-202ENST00000368311 KRTAP12-4P60329 112 aa3.13□□□□□ -1.91
SSR2-202ENST00000368311 HYDINQ4G0P3 5121 aa3.13□□□□□ -1.91
SSR2-202ENST00000368311 MT1BP07438 61 aa3.12□□□□□ -1.91
SSR2-202ENST00000368311 KRTAP20-1Q3LI63 56 aa3.11□□□□□ -1.91
SSR2-202ENST00000368311 KRTAP9-7A8MTY7 169 aa3.08□□□□□ -1.92
SSR2-202ENST00000368311 KRTAP19-5Q3LI72 72 aa3.08□□□□□ -1.92
SSR2-202ENST00000368311 KIAA1109Q2LD37 5005 aa3.08□□□□□ -1.92
SSR2-202ENST00000368311 TNXBP22105 4242 aa3.07□□□□□ -1.92
SSR2-202ENST00000368311 KRTAP19-2Q3LHN2 52 aa3.07□□□□□ -1.92
SSR2-202ENST00000368311 MT1XP80297 61 aa3.05□□□□□ -1.92
SSR2-202ENST00000368311 LRP2P98164 4655 aa3.04□□□□□ -1.92
SSR2-202ENST00000368311 KRTAP2-3P0C7H8 128 aa3.03□□□□□ -1.92
SSR2-202ENST00000368311 KRTAP2-4Q9BYR9 128 aa3.03□□□□□ -1.92
SSR2-202ENST00000368311 LCE3CQ5T5A8 94 aa3.02□□□□□ -1.93
SSR2-202ENST00000368311 LCE1AQ5T7P2 110 aa3.02□□□□□ -1.93
SSR2-202ENST00000368311 ABCA13Q86UQ4 5058 aa2.98□□□□□ -1.93
SSR2-202ENST00000368311 KRTAP19-3Q7Z4W3 81 aa2.98□□□□□ -1.93
SSR2-202ENST00000368311 LCE3BQ5TA77 95 aa2.97□□□□□ -1.93
SSR2-202ENST00000368311 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.96□□□□□ -1.93
SSR2-202ENST00000368311 SPRR5A0A1B0GTR4 108 aa2.95□□□□□ -1.94
SSR2-202ENST00000368311 KRTAP2-2Q9BYT5 123 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms