RNA–Protein interactions for RNA: ENST00000368258.7

CCT3-203, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 1,885 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-203ENST00000368258 FAT2Q9NYQ8 4349 aa6.53□□□□□ -1.36
CCT3-203ENST00000368258 LRP1BQ9NZR2 4599 aa6.52□□□□□ -1.37
CCT3-203ENST00000368258 RPL37P61927 97 aaKnown RBP6.49□□□□□ -1.37
CCT3-203ENST00000368258 PKD1P98161 4303 aa6.46□□□□□ -1.38
CCT3-203ENST00000368258 CRIPTQ9P021 101 aa6.45□□□□□ -1.38
CCT3-203ENST00000368258 KRTAP4-5Q9BYR2 181 aa6.45□□□□□ -1.38
CCT3-203ENST00000368258 ABCA13Q86UQ4 5058 aa6.43□□□□□ -1.38
CCT3-203ENST00000368258 LCE2BO14633 110 aa6.42□□□□□ -1.38
CCT3-203ENST00000368258 KRTAP10-6P60371 365 aaPredicted RBP6.42□□□□□ -1.38
CCT3-203ENST00000368258 VPS13BQ7Z7G8 4022 aa6.42□□□□□ -1.38
CCT3-203ENST00000368258 FLG2Q5D862 2391 aaPredicted RBP6.41□□□□□ -1.38
CCT3-203ENST00000368258 C9orf92A6NGG3 77 aa6.41□□□□□ -1.38
CCT3-203ENST00000368258 PKHD1P08F94 4074 aa6.41□□□□□ -1.38
CCT3-203ENST00000368258 TPRXLQ17RH7 258 aa6.4□□□□□ -1.39
CCT3-203ENST00000368258 HSPG2P98160 4391 aa6.37□□□□□ -1.39
CCT3-203ENST00000368258 SPINT4Q6UDR6 99 aa6.37□□□□□ -1.39
CCT3-203ENST00000368258 KRTAP13-4Q3LI77 160 aa6.35□□□□□ -1.39
CCT3-203ENST00000368258 PKHD1L1Q86WI1 4243 aa6.35□□□□□ -1.39
CCT3-203ENST00000368258 KRTAP15-1Q3LI76 137 aa6.34□□□□□ -1.39
CCT3-203ENST00000368258 APOBP04114 4563 aaKnown RBP6.33□□□□□ -1.4
CCT3-203ENST00000368258 A0A0D9SG42 100 aa6.26□□□□□ -1.41
CCT3-203ENST00000368258 HERC1Q15751 4861 aa6.26□□□□□ -1.41
CCT3-203ENST00000368258 S4R3F8 94 aa6.26□□□□□ -1.41
CCT3-203ENST00000368258 C10orf95Q9H7T3 257 aa6.24□□□□□ -1.41
CCT3-203ENST00000368258 NDUFAF8A1L188 74 aa6.22□□□□□ -1.41
CCT3-203ENST00000368258 Q5VSD8 79 aa6.22□□□□□ -1.41
CCT3-203ENST00000368258 KRTAP10-4P60372 401 aaPredicted RBP6.21□□□□□ -1.42
CCT3-203ENST00000368258 KRTAP12-2P59991 146 aa6.18□□□□□ -1.42
CCT3-203ENST00000368258 XP32Q5T750 250 aa6.18□□□□□ -1.42
CCT3-203ENST00000368258 LCE2CQ5TA81 110 aa6.17□□□□□ -1.42
CCT3-203ENST00000368258 KRTAP12-1P59990 96 aa6.15□□□□□ -1.42
CCT3-203ENST00000368258 DMBT1Q9UGM3 2413 aaPredicted RBP6.13□□□□□ -1.43
CCT3-203ENST00000368258 SMR3BP02814 79 aaPredicted RBP6.11□□□□□ -1.43
CCT3-203ENST00000368258 FAT1Q14517 4588 aa6.11□□□□□ -1.43
CCT3-203ENST00000368258 M0QZ58 72 aa6.09□□□□□ -1.43
CCT3-203ENST00000368258 KRTAP10-8P60410 259 aa6.09□□□□□ -1.43
CCT3-203ENST00000368258 MYCBP2O75592 4640 aa6.09□□□□□ -1.44
CCT3-203ENST00000368258 LCE2AQ5TA79 106 aaPredicted RBP6.08□□□□□ -1.44
CCT3-203ENST00000368258 UBR4Q5T4S7 5183 aa6.05□□□□□ -1.44
CCT3-203ENST00000368258 LRP1Q07954 4544 aaKnown RBP6.05□□□□□ -1.44
CCT3-203ENST00000368258 FAT3Q8TDW7 4589 aa6.03□□□□□ -1.44
CCT3-203ENST00000368258 TNXBP22105 4242 aa6.02□□□□□ -1.45
CCT3-203ENST00000368258 LORP23490 312 aaPredicted RBP6□□□□□ -1.45
CCT3-203ENST00000368258 HMCN2Q8NDA2 5059 aa5.88□□□□□ -1.47
CCT3-203ENST00000368258 PLAC4Q8WY50 150 aa5.87□□□□□ -1.47
CCT3-203ENST00000368258 MT1HL1P0DM35 61 aa5.85□□□□□ -1.47
CCT3-203ENST00000368258 A0A0A0MQY5 61 aa5.77□□□□□ -1.49
CCT3-203ENST00000368258 LUZP6Q538Z0 58 aa5.77□□□□□ -1.49
CCT3-203ENST00000368258 PP632Q6XCG6 107 aa5.77□□□□□ -1.49
CCT3-203ENST00000368258 R4GN34 69 aa5.77□□□□□ -1.49
CCT3-203ENST00000368258 RNF213Q63HN8 5207 aa5.74□□□□□ -1.49
CCT3-203ENST00000368258 KRTAP9-6A0A140TA67 174 aa5.69□□□□□ -1.5
CCT3-203ENST00000368258 KRTAP9-2Q9BYQ4 174 aa5.66□□□□□ -1.5
CCT3-203ENST00000368258 LRP2P98164 4655 aa5.66□□□□□ -1.5
CCT3-203ENST00000368258 KRTAP23-1A1A580 65 aa5.57□□□□□ -1.52
CCT3-203ENST00000368258 LPAP08519 4548 aa5.55□□□□□ -1.52
CCT3-203ENST00000368258 SPRR5A0A1B0GTR4 108 aa5.53□□□□□ -1.52
CCT3-203ENST00000368258 CAMK2N1Q7Z7J9 78 aa5.51□□□□□ -1.53
CCT3-203ENST00000368258 SEC61BP60468 96 aaKnown RBP5.47□□□□□ -1.53
CCT3-203ENST00000368258 TNP1P09430 55 aa5.41□□□□□ -1.54
CCT3-203ENST00000368258 MUC17Q685J3 4493 aa5.4□□□□□ -1.54
CCT3-203ENST00000368258 MUC2Q02817 5179 aa5.39□□□□□ -1.55
CCT3-203ENST00000368258 FAT4Q6V0I7 4981 aa5.38□□□□□ -1.55
CCT3-203ENST00000368258 KRTAP19-2Q3LHN2 52 aa5.38□□□□□ -1.55
CCT3-203ENST00000368258 KRTAP4-1Q9BYQ7 146 aa5.32□□□□□ -1.56
CCT3-203ENST00000368258 CRCT1Q9UGL9 99 aa5.28□□□□□ -1.56
CCT3-203ENST00000368258 PRO2289Q9P1D8 64 aa5.23□□□□□ -1.57
CCT3-203ENST00000368258 FSIP2Q5CZC0 6907 aa5.19□□□□□ -1.58
CCT3-203ENST00000368258 FLGP20930 4061 aaPredicted RBP5.16□□□□□ -1.58
CCT3-203ENST00000368258 INE1O15225 51 aa5.15□□□□□ -1.58
CCT3-203ENST00000368258 SPRR2GQ9BYE4 73 aa5.09□□□□□ -1.6
CCT3-203ENST00000368258 KRTAP9-7A8MTY7 169 aa5.05□□□□□ -1.6
CCT3-203ENST00000368258 LCE3AQ5TA76 89 aa5.03□□□□□ -1.6
CCT3-203ENST00000368258 KRTAP8-1Q8IUC2 63 aa5.01□□□□□ -1.61
CCT3-203ENST00000368258 MT1HP80294 61 aa4.98□□□□□ -1.61
CCT3-203ENST00000368258 KRTAP19-1Q8IUB9 90 aa4.98□□□□□ -1.61
CCT3-203ENST00000368258 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.94□□□□□ -1.62
CCT3-203ENST00000368258 M0R2T5 61 aa4.87□□□□□ -1.63
CCT3-203ENST00000368258 KRTAP19-4Q3LI73 84 aa4.87□□□□□ -1.63
CCT3-203ENST00000368258 KRTAP19-8Q3LI54 63 aa4.82□□□□□ -1.64
CCT3-203ENST00000368258 KRTAP12-3P60328 96 aa4.81□□□□□ -1.64
CCT3-203ENST00000368258 KRTAP10-12P60413 245 aa4.79□□□□□ -1.64
CCT3-203ENST00000368258 KRTAP10-5P60370 271 aa4.75□□□□□ -1.65
CCT3-203ENST00000368258 MT2AP02795 61 aa4.73□□□□□ -1.65
CCT3-203ENST00000368258 MT1FP04733 61 aa4.73□□□□□ -1.65
CCT3-203ENST00000368258 MT1XP80297 61 aa4.73□□□□□ -1.65
CCT3-203ENST00000368258 KRTAP10-10P60014 251 aa4.69□□□□□ -1.66
CCT3-203ENST00000368258 MT1BP07438 61 aa4.69□□□□□ -1.66
CCT3-203ENST00000368258 KRTAP9-8Q9BYQ0 159 aa4.69□□□□□ -1.66
CCT3-203ENST00000368258 LOC100996750A0A140TA64 210 aa4.66□□□□□ -1.66
CCT3-203ENST00000368258 KRTAP4-6Q9BYQ5 205 aa4.66□□□□□ -1.66
CCT3-203ENST00000368258 SSPOA2VEC9 5147 aa4.63□□□□□ -1.67
CCT3-203ENST00000368258 USH2AO75445 5202 aa4.61□□□□□ -1.67
CCT3-203ENST00000368258 FCGBPQ9Y6R7 5405 aaPredicted RBP4.59□□□□□ -1.68
CCT3-203ENST00000368258 KRTAP10-7P60409 375 aaPredicted RBP4.57□□□□□ -1.68
CCT3-203ENST00000368258 LCE3CQ5T5A8 94 aa4.56□□□□□ -1.68
CCT3-203ENST00000368258 KRTAP9-3Q9BYQ3 159 aa4.56□□□□□ -1.68
CCT3-203ENST00000368258 SYNE2Q8WXH0 6885 aaKnown RBP4.55□□□□□ -1.68
CCT3-203ENST00000368258 MACF1Q9UPN3 7388 aaKnown RBP4.53□□□□□ -1.68
CCT3-203ENST00000368258 KRTAP6-3Q3LI67 103 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms