RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 DNAH1Q9P2D7 4330 aa5.74□□□□□ -1.49
PTPRK-203ENST00000368207 KRTAP3-3Q9BYR6 98 aa5.73□□□□□ -1.49
PTPRK-203ENST00000368207 PRKDCP78527 4128 aaKnown RBP5.7□□□□□ -1.5
PTPRK-203ENST00000368207 KRTAP3-2Q9BYR7 98 aa5.68□□□□□ -1.5
PTPRK-203ENST00000368207 DNAH10Q8IVF4 4471 aa5.68□□□□□ -1.5
PTPRK-203ENST00000368207 STARD9Q9P2P6 4700 aa5.64□□□□□ -1.51
PTPRK-203ENST00000368207 FAT1Q14517 4588 aa5.63□□□□□ -1.51
PTPRK-203ENST00000368207 VPS13DQ5THJ4 4388 aa5.63□□□□□ -1.51
PTPRK-203ENST00000368207 DYNC1H1Q14204 4646 aaKnown RBP5.6□□□□□ -1.51
PTPRK-203ENST00000368207 DNAH17Q9UFH2 4485 aa5.56□□□□□ -1.52
PTPRK-203ENST00000368207 LRP1BQ9NZR2 4599 aa5.54□□□□□ -1.52
PTPRK-203ENST00000368207 RYR1P21817 5038 aa5.53□□□□□ -1.52
PTPRK-203ENST00000368207 DNAH3Q8TD57 4116 aa5.48□□□□□ -1.53
PTPRK-203ENST00000368207 DNAH2Q9P225 4427 aa5.46□□□□□ -1.54
PTPRK-203ENST00000368207 LORP23490 312 aaPredicted RBP5.46□□□□□ -1.54
PTPRK-203ENST00000368207 DNAH8Q96JB1 4490 aa5.44□□□□□ -1.54
PTPRK-203ENST00000368207 KIAA1109Q2LD37 5005 aa5.44□□□□□ -1.54
PTPRK-203ENST00000368207 DYNC2H1Q8NCM8 4307 aaKnown RBP5.42□□□□□ -1.54
PTPRK-203ENST00000368207 KMT2AQ03164 3969 aa5.42□□□□□ -1.54
PTPRK-203ENST00000368207 BIRC6Q9NR09 4857 aa5.41□□□□□ -1.54
PTPRK-203ENST00000368207 LYSTQ99698 3801 aa5.4□□□□□ -1.54
PTPRK-203ENST00000368207 CMYA5Q8N3K9 4069 aa5.4□□□□□ -1.54
PTPRK-203ENST00000368207 KRTAP4-1Q9BYQ7 146 aa5.4□□□□□ -1.55
PTPRK-203ENST00000368207 RYR2Q92736 4967 aa5.4□□□□□ -1.55
PTPRK-203ENST00000368207 KRTAP15-1Q3LI76 137 aa5.39□□□□□ -1.55
PTPRK-203ENST00000368207 SACSQ9NZJ4 4579 aa5.38□□□□□ -1.55
PTPRK-203ENST00000368207 RYR3Q15413 4870 aa5.38□□□□□ -1.55
PTPRK-203ENST00000368207 MYCBP2O75592 4640 aa5.33□□□□□ -1.56
PTPRK-203ENST00000368207 FAT2Q9NYQ8 4349 aa5.33□□□□□ -1.56
PTPRK-203ENST00000368207 KRTAP10-12P60413 245 aa5.31□□□□□ -1.56
PTPRK-203ENST00000368207 VPS13BQ7Z7G8 4022 aa5.29□□□□□ -1.56
PTPRK-203ENST00000368207 APOBP04114 4563 aaKnown RBP5.26□□□□□ -1.57
PTPRK-203ENST00000368207 DNAH6Q9C0G6 4158 aa5.26□□□□□ -1.57
PTPRK-203ENST00000368207 KRTAP17-1Q9BYP8 105 aa5.24□□□□□ -1.57
PTPRK-203ENST00000368207 LRP1Q07954 4544 aaKnown RBP5.21□□□□□ -1.58
PTPRK-203ENST00000368207 DNAH7Q8WXX0 4024 aa5.2□□□□□ -1.58
PTPRK-203ENST00000368207 KMT2CQ8NEZ4 4911 aaKnown RBP5.2□□□□□ -1.58
PTPRK-203ENST00000368207 FAT3Q8TDW7 4589 aa5.19□□□□□ -1.58
PTPRK-203ENST00000368207 HERC2O95714 4834 aa5.18□□□□□ -1.58
PTPRK-203ENST00000368207 LCE3AQ5TA76 89 aa5.18□□□□□ -1.58
PTPRK-203ENST00000368207 HYDINQ4G0P3 5121 aa5.18□□□□□ -1.58
PTPRK-203ENST00000368207 KRTAP12-3P60328 96 aa5.17□□□□□ -1.58
PTPRK-203ENST00000368207 MT1HP80294 61 aa5.16□□□□□ -1.58
PTPRK-203ENST00000368207 CRCT1Q9UGL9 99 aa5.1□□□□□ -1.59
PTPRK-203ENST00000368207 MT2AP02795 61 aa5.1□□□□□ -1.59
PTPRK-203ENST00000368207 FRAS1Q86XX4 4008 aa5.09□□□□□ -1.6
PTPRK-203ENST00000368207 HECTD4Q9Y4D8 3996 aa5.06□□□□□ -1.6
PTPRK-203ENST00000368207 KRTAP23-1A1A580 65 aa5.04□□□□□ -1.6
PTPRK-203ENST00000368207 PKHD1P08F94 4074 aa5.03□□□□□ -1.6
PTPRK-203ENST00000368207 MT1FP04733 61 aa5.03□□□□□ -1.6
PTPRK-203ENST00000368207 EPPK1P58107 5090 aaKnown RBP5.01□□□□□ -1.61
PTPRK-203ENST00000368207 SPRR2GQ9BYE4 73 aa5□□□□□ -1.61
PTPRK-203ENST00000368207 LRP2P98164 4655 aa5□□□□□ -1.61
PTPRK-203ENST00000368207 HSPG2P98160 4391 aa4.99□□□□□ -1.61
PTPRK-203ENST00000368207 KRTAP8-1Q8IUC2 63 aa4.93□□□□□ -1.62
PTPRK-203ENST00000368207 PKD1P98161 4303 aa4.86□□□□□ -1.63
PTPRK-203ENST00000368207 ABCA13Q86UQ4 5058 aa4.86□□□□□ -1.63
PTPRK-203ENST00000368207 HERC1Q15751 4861 aa4.85□□□□□ -1.63
PTPRK-203ENST00000368207 PCLOQ9Y6V0 5065 aa4.84□□□□□ -1.63
PTPRK-203ENST00000368207 KRTAP19-1Q8IUB9 90 aa4.81□□□□□ -1.64
PTPRK-203ENST00000368207 INE1O15225 51 aa4.77□□□□□ -1.65
PTPRK-203ENST00000368207 LPAP08519 4548 aa4.74□□□□□ -1.65
PTPRK-203ENST00000368207 PKHD1L1Q86WI1 4243 aa4.72□□□□□ -1.65
PTPRK-203ENST00000368207 KRTAP19-5Q3LI72 72 aa4.71□□□□□ -1.65
PTPRK-203ENST00000368207 KRTAP19-8Q3LI54 63 aa4.69□□□□□ -1.66
PTPRK-203ENST00000368207 LCE2CQ5TA81 110 aa4.69□□□□□ -1.66
PTPRK-203ENST00000368207 KRTAP9-8Q9BYQ0 159 aa4.67□□□□□ -1.66
PTPRK-203ENST00000368207 KRTAP10-5P60370 271 aa4.65□□□□□ -1.66
PTPRK-203ENST00000368207 KRTAP10-7P60409 375 aaPredicted RBP4.65□□□□□ -1.66
PTPRK-203ENST00000368207 SPRR2FQ96RM1 72 aa4.65□□□□□ -1.67
PTPRK-203ENST00000368207 MT1BP07438 61 aa4.61□□□□□ -1.67
PTPRK-203ENST00000368207 MT1XP80297 61 aa4.6□□□□□ -1.67
PTPRK-203ENST00000368207 LCE3CQ5T5A8 94 aa4.55□□□□□ -1.68
PTPRK-203ENST00000368207 KRTAP19-2Q3LHN2 52 aa4.54□□□□□ -1.68
PTPRK-203ENST00000368207 KRTAP9-3Q9BYQ3 159 aa4.53□□□□□ -1.68
PTPRK-203ENST00000368207 TNXBP22105 4242 aa4.52□□□□□ -1.69
PTPRK-203ENST00000368207 HMCN2Q8NDA2 5059 aa4.49□□□□□ -1.69
PTPRK-203ENST00000368207 MUC17Q685J3 4493 aa4.48□□□□□ -1.69
PTPRK-203ENST00000368207 FSIP2Q5CZC0 6907 aa4.48□□□□□ -1.69
PTPRK-203ENST00000368207 RNF213Q63HN8 5207 aa4.47□□□□□ -1.69
PTPRK-203ENST00000368207 KRTAP4-8A0A0G2JLE6 195 aa4.47□□□□□ -1.69
PTPRK-203ENST00000368207 KRTAP4-8Q9BYQ9 185 aa4.47□□□□□ -1.69
PTPRK-203ENST00000368207 UBR4Q5T4S7 5183 aa4.47□□□□□ -1.69
PTPRK-203ENST00000368207 LCE2AQ5TA79 106 aaPredicted RBP4.44□□□□□ -1.7
PTPRK-203ENST00000368207 KRTAP9-2Q9BYQ4 174 aa4.41□□□□□ -1.7
PTPRK-203ENST00000368207 MUC2Q02817 5179 aa4.39□□□□□ -1.71
PTPRK-203ENST00000368207 FLGP20930 4061 aaPredicted RBP4.39□□□□□ -1.71
PTPRK-203ENST00000368207 LCE2BO14633 110 aa4.39□□□□□ -1.71
PTPRK-203ENST00000368207 FAT4Q6V0I7 4981 aa4.36□□□□□ -1.71
PTPRK-203ENST00000368207 LCE2DQ5TA82 110 aaPredicted RBP4.34□□□□□ -1.71
PTPRK-203ENST00000368207 KRTAP19-4Q3LI73 84 aa4.33□□□□□ -1.72
PTPRK-203ENST00000368207 SPRR2EP22531 72 aa4.3□□□□□ -1.72
PTPRK-203ENST00000368207 SPRR2BP35325 72 aa4.3□□□□□ -1.72
PTPRK-203ENST00000368207 SPRR2AP35326 72 aa4.3□□□□□ -1.72
PTPRK-203ENST00000368207 MT1GP13640 62 aa4.27□□□□□ -1.73
PTPRK-203ENST00000368207 KRTAP9-6A0A140TA67 174 aa4.26□□□□□ -1.73
PTPRK-203ENST00000368207 SYNE1Q8NF91 8797 aaKnown RBP4.23□□□□□ -1.73
PTPRK-203ENST00000368207 SPRR5A0A1B0GTR4 108 aa4.19□□□□□ -1.74
PTPRK-203ENST00000368207 LCE3BQ5TA77 95 aa4.19□□□□□ -1.74
PTPRK-203ENST00000368207 KRTAP4-7Q9BYR0 210 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms