RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 RPL37P61927 97 aaKnown RBP10.38□□□□□ -0.75
TRIM58-201ENST00000366481 PKHD1L1Q86WI1 4243 aa10.35□□□□□ -0.75
TRIM58-201ENST00000366481 KRTAP10-4P60372 401 aaPredicted RBP10.35□□□□□ -0.75
TRIM58-201ENST00000366481 KIAA1109Q2LD37 5005 aa10.34□□□□□ -0.75
TRIM58-201ENST00000366481 C10orf95Q9H7T3 257 aa10.33□□□□□ -0.76
TRIM58-201ENST00000366481 A0A1B0GVY2 172 aa10.33□□□□□ -0.76
TRIM58-201ENST00000366481 C20orf166-AS1Q96NR2 134 aa10.33□□□□□ -0.76
TRIM58-201ENST00000366481 RYR3Q15413 4870 aa10.32□□□□□ -0.76
TRIM58-201ENST00000366481 RPS29P62273 56 aaKnown RBP10.29□□□□□ -0.76
TRIM58-201ENST00000366481 HSPG2P98160 4391 aa10.28□□□□□ -0.76
TRIM58-201ENST00000366481 Q5VSD8 79 aa10.26□□□□□ -0.77
TRIM58-201ENST00000366481 NDUFAF8A1L188 74 aa10.26□□□□□ -0.77
TRIM58-201ENST00000366481 TPRXLQ17RH7 258 aa10.25□□□□□ -0.77
TRIM58-201ENST00000366481 FAT3Q8TDW7 4589 aa10.23□□□□□ -0.77
TRIM58-201ENST00000366481 KRTAP13-4Q3LI77 160 aa10.18□□□□□ -0.78
TRIM58-201ENST00000366481 KRTAP10-6P60371 365 aaPredicted RBP10.1□□□□□ -0.79
TRIM58-201ENST00000366481 TNXBP22105 4242 aa10.1□□□□□ -0.79
TRIM58-201ENST00000366481 RYR1P21817 5038 aa10.08□□□□□ -0.8
TRIM58-201ENST00000366481 EPPK1P58107 5090 aaKnown RBP10.06□□□□□ -0.8
TRIM58-201ENST00000366481 KRTAP17-1Q9BYP8 105 aa10.06□□□□□ -0.8
TRIM58-201ENST00000366481 KRTAP10-8P60410 259 aa10.05□□□□□ -0.8
TRIM58-201ENST00000366481 LPAP08519 4548 aa10.04□□□□□ -0.8
TRIM58-201ENST00000366481 S4R3F8 94 aa10.03□□□□□ -0.8
TRIM58-201ENST00000366481 KRTAP3-3Q9BYR6 98 aa9.97□□□□□ -0.81
TRIM58-201ENST00000366481 KRTAP12-2P59991 146 aa9.95□□□□□ -0.82
TRIM58-201ENST00000366481 KRTAP3-2Q9BYR7 98 aa9.94□□□□□ -0.82
TRIM58-201ENST00000366481 XP32Q5T750 250 aa9.94□□□□□ -0.82
TRIM58-201ENST00000366481 LRP2P98164 4655 aa9.93□□□□□ -0.82
TRIM58-201ENST00000366481 KRTAP15-1Q3LI76 137 aa9.92□□□□□ -0.82
TRIM58-201ENST00000366481 KRTAP4-5Q9BYR2 181 aa9.82□□□□□ -0.84
TRIM58-201ENST00000366481 KRTAP12-1P59990 96 aa9.77□□□□□ -0.85
TRIM58-201ENST00000366481 ABCA13Q86UQ4 5058 aa9.75□□□□□ -0.85
TRIM58-201ENST00000366481 MT1HL1P0DM35 61 aa9.7□□□□□ -0.86
TRIM58-201ENST00000366481 J3QL48 77 aa9.62□□□□□ -0.87
TRIM58-201ENST00000366481 M0QZ58 72 aa9.56□□□□□ -0.88
TRIM58-201ENST00000366481 HERC2O95714 4834 aa9.52□□□□□ -0.89
TRIM58-201ENST00000366481 R4GN34 69 aa9.5□□□□□ -0.89
TRIM58-201ENST00000366481 MUC2Q02817 5179 aa9.49□□□□□ -0.89
TRIM58-201ENST00000366481 PLAC4Q8WY50 150 aa9.46□□□□□ -0.89
TRIM58-201ENST00000366481 A0A0A0MQY5 61 aa9.46□□□□□ -0.9
TRIM58-201ENST00000366481 LUZP6Q538Z0 58 aa9.44□□□□□ -0.9
TRIM58-201ENST00000366481 HERC1Q15751 4861 aa9.29□□□□□ -0.92
TRIM58-201ENST00000366481 LORP23490 312 aaPredicted RBP9.23□□□□□ -0.93
TRIM58-201ENST00000366481 KRTAP4-1Q9BYQ7 146 aa9.2□□□□□ -0.94
TRIM58-201ENST00000366481 CAMK2N1Q7Z7J9 78 aa9.2□□□□□ -0.94
TRIM58-201ENST00000366481 MUC17Q685J3 4493 aa9.15□□□□□ -0.94
TRIM58-201ENST00000366481 PCLOQ9Y6V0 5065 aa9.12□□□□□ -0.95
TRIM58-201ENST00000366481 SEC61BP60468 96 aaKnown RBP9.1□□□□□ -0.95
TRIM58-201ENST00000366481 RNF213Q63HN8 5207 aa9.07□□□□□ -0.96
TRIM58-201ENST00000366481 BIRC6Q9NR09 4857 aa9.03□□□□□ -0.96
TRIM58-201ENST00000366481 FAT4Q6V0I7 4981 aa9.02□□□□□ -0.97
TRIM58-201ENST00000366481 PP632Q6XCG6 107 aa8.95□□□□□ -0.98
TRIM58-201ENST00000366481 UBR4Q5T4S7 5183 aa8.86□□□□□ -0.99
TRIM58-201ENST00000366481 KRTAP19-2Q3LHN2 52 aa8.8□□□□□ -1
TRIM58-201ENST00000366481 M0R2T5 61 aa8.75□□□□□ -1.01
TRIM58-201ENST00000366481 TNP1P09430 55 aa8.72□□□□□ -1.01
TRIM58-201ENST00000366481 HMCN2Q8NDA2 5059 aa8.7□□□□□ -1.02
TRIM58-201ENST00000366481 FLGP20930 4061 aaPredicted RBP8.67□□□□□ -1.02
TRIM58-201ENST00000366481 LCE2CQ5TA81 110 aa8.32□□□□□ -1.08
TRIM58-201ENST00000366481 SPRR5A0A1B0GTR4 108 aa8.3□□□□□ -1.08
TRIM58-201ENST00000366481 KRTAP10-10P60014 251 aa8.27□□□□□ -1.09
TRIM58-201ENST00000366481 KRTAP23-1A1A580 65 aa8.24□□□□□ -1.09
TRIM58-201ENST00000366481 KRTAP19-1Q8IUB9 90 aa8.19□□□□□ -1.1
TRIM58-201ENST00000366481 MT1HP80294 61 aa8.15□□□□□ -1.11
TRIM58-201ENST00000366481 PRO2289Q9P1D8 64 aa8.13□□□□□ -1.11
TRIM58-201ENST00000366481 LCE3AQ5TA76 89 aa8.13□□□□□ -1.11
TRIM58-201ENST00000366481 MT1FP04733 61 aa8.09□□□□□ -1.11
TRIM58-201ENST00000366481 SPRR2GQ9BYE4 73 aa8.07□□□□□ -1.12
TRIM58-201ENST00000366481 USH2AO75445 5202 aa8.05□□□□□ -1.12
TRIM58-201ENST00000366481 MT2AP02795 61 aa8.03□□□□□ -1.12
TRIM58-201ENST00000366481 FSIP2Q5CZC0 6907 aa7.99□□□□□ -1.13
TRIM58-201ENST00000366481 INE1O15225 51 aa7.92□□□□□ -1.14
TRIM58-201ENST00000366481 KRTAP9-8Q9BYQ0 159 aa7.92□□□□□ -1.14
TRIM58-201ENST00000366481 MT1BP07438 61 aa7.75□□□□□ -1.17
TRIM58-201ENST00000366481 KMT2DO14686 5537 aa7.72□□□□□ -1.17
TRIM58-201ENST00000366481 KRTAP12-3P60328 96 aa7.72□□□□□ -1.17
TRIM58-201ENST00000366481 KRTAP10-5P60370 271 aa7.72□□□□□ -1.17
TRIM58-201ENST00000366481 MT1XP80297 61 aa7.72□□□□□ -1.17
TRIM58-201ENST00000366481 KRTAP8-1Q8IUC2 63 aa7.71□□□□□ -1.18
TRIM58-201ENST00000366481 KRTAP19-8Q3LI54 63 aa7.65□□□□□ -1.18
TRIM58-201ENST00000366481 KRTAP10-7P60409 375 aaPredicted RBP7.64□□□□□ -1.19
TRIM58-201ENST00000366481 KRTAP10-12P60413 245 aa7.62□□□□□ -1.19
TRIM58-201ENST00000366481 KRTAP9-3Q9BYQ3 159 aa7.56□□□□□ -1.2
TRIM58-201ENST00000366481 LCE2BO14633 110 aa7.4□□□□□ -1.22
TRIM58-201ENST00000366481 KRTAP4-8A0A0G2JLE6 195 aa7.3□□□□□ -1.24
TRIM58-201ENST00000366481 KRTAP4-8Q9BYQ9 185 aa7.3□□□□□ -1.24
TRIM58-201ENST00000366481 KRTAP19-5Q3LI72 72 aa7.29□□□□□ -1.24
TRIM58-201ENST00000366481 LCE2AQ5TA79 106 aaPredicted RBP7.21□□□□□ -1.26
TRIM58-201ENST00000366481 LCE3CQ5T5A8 94 aa7.2□□□□□ -1.26
TRIM58-201ENST00000366481 SSPOA2VEC9 5147 aa7.11□□□□□ -1.27
TRIM58-201ENST00000366481 KRTAP4-7Q9BYR0 210 aa7.06□□□□□ -1.28
TRIM58-201ENST00000366481 KRTAP9-6A8MVA2 160 aa6.97□□□□□ -1.29
TRIM58-201ENST00000366481 DSTQ03001 7570 aaKnown RBP6.97□□□□□ -1.29
TRIM58-201ENST00000366481 MUC12Q9UKN1 5478 aa6.91□□□□□ -1.3
TRIM58-201ENST00000366481 KRTAP19-7Q3SYF9 63 aa6.87□□□□□ -1.31
TRIM58-201ENST00000366481 FCGBPQ9Y6R7 5405 aaPredicted RBP6.84□□□□□ -1.32
TRIM58-201ENST00000366481 KRTAP2-3P0C7H8 128 aa6.75□□□□□ -1.33
TRIM58-201ENST00000366481 KRTAP2-4Q9BYR9 128 aa6.75□□□□□ -1.33
TRIM58-201ENST00000366481 KRTAP2-1Q9BYU5 128 aa6.75□□□□□ -1.33
TRIM58-201ENST00000366481 MT1LQ93083 61 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms