RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 TP53AIP1Q9HCN2 124 aa9□□□□□ -0.97
CD47-202ENST00000361309 TAX1BP3O14907 124 aa8.99□□□□□ -0.97
CD47-202ENST00000361309 CYP4F30PQ9H0H9 118 aa8.93□□□□□ -0.98
CD47-202ENST00000361309 PRO2289Q9P1D8 64 aa8.9□□□□□ -0.98
CD47-202ENST00000361309 SMIM6P0DI80 62 aa8.89□□□□□ -0.99
CD47-202ENST00000361309 KRTAP2-2Q9BYT5 123 aa8.88□□□□□ -0.99
CD47-202ENST00000361309 KRTAP2-1Q9BYU5 128 aa8.88□□□□□ -0.99
CD47-202ENST00000361309 MT1XP80297 61 aa8.87□□□□□ -0.99
CD47-202ENST00000361309 KRTAP8-1Q8IUC2 63 aa8.87□□□□□ -0.99
CD47-202ENST00000361309 SPCS1Q9Y6A9 102 aa8.87□□□□□ -0.99
CD47-202ENST00000361309 H0YAA0 97 aa8.85□□□□□ -0.99
CD47-202ENST00000361309 LCE1AQ5T7P2 110 aa8.85□□□□□ -0.99
CD47-202ENST00000361309 A8MUN3 132 aa8.82□□□□□ -1
CD47-202ENST00000361309 NDUFC1O43677 76 aa8.81□□□□□ -1
CD47-202ENST00000361309 K7EP34 96 aa8.79□□□□□ -1
CD47-202ENST00000361309 ADM2Q7Z4H4 148 aa8.78□□□□□ -1
CD47-202ENST00000361309 TRAV22A0A0B4J277 110 aa8.77□□□□□ -1.01
CD47-202ENST00000361309 LOC101927531A0A1B0GV80 90 aa8.77□□□□□ -1.01
CD47-202ENST00000361309 PRO0461Q9UI25 63 aa8.77□□□□□ -1.01
CD47-202ENST00000361309 PLAC4Q8WY50 150 aa8.76□□□□□ -1.01
CD47-202ENST00000361309 H3BS24 57 aa8.74□□□□□ -1.01
CD47-202ENST00000361309 SPRR2DP22532 72 aa8.74□□□□□ -1.01
CD47-202ENST00000361309 KRTAP12-2P59991 146 aa8.73□□□□□ -1.01
CD47-202ENST00000361309 KRTAP4-8A0A0G2JLE6 195 aa8.66□□□□□ -1.02
CD47-202ENST00000361309 KRTAP4-8Q9BYQ9 185 aa8.66□□□□□ -1.02
CD47-202ENST00000361309 ACYP1P07311 99 aa8.63□□□□□ -1.03
CD47-202ENST00000361309 R4GN34 69 aa8.58□□□□□ -1.04
CD47-202ENST00000361309 H0Y9P7 68 aa8.57□□□□□ -1.04
CD47-202ENST00000361309 UQCRQO14949 82 aa8.55□□□□□ -1.04
CD47-202ENST00000361309 LCE3BQ5TA77 95 aa8.55□□□□□ -1.04
CD47-202ENST00000361309 ATOX1O00244 68 aa8.54□□□□□ -1.04
CD47-202ENST00000361309 P0C880 135 aa8.52□□□□□ -1.05
CD47-202ENST00000361309 COL5A1-AS1Q5SY13 56 aa8.52□□□□□ -1.05
CD47-202ENST00000361309 M0QZ58 72 aa8.5□□□□□ -1.05
CD47-202ENST00000361309 ETDBQ3ZM63 59 aa8.49□□□□□ -1.05
CD47-202ENST00000361309 KRTAP10-7P60409 375 aaPredicted RBP8.48□□□□□ -1.05
CD47-202ENST00000361309 C20orf197Q8N268 126 aa8.46□□□□□ -1.06
CD47-202ENST00000361309 F8W1H4 67 aa8.43□□□□□ -1.06
CD47-202ENST00000361309 HIST1H4AP62805 103 aaKnown RBP8.42□□□□□ -1.06
CD47-202ENST00000361309 LINC01554Q52M75 96 aa8.42□□□□□ -1.06
CD47-202ENST00000361309 LOC105371267A0A1B0GV96 52 aa8.41□□□□□ -1.06
CD47-202ENST00000361309 KRTAP10-12P60413 245 aa8.41□□□□□ -1.06
CD47-202ENST00000361309 GTF2H5Q6ZYL4 71 aa8.41□□□□□ -1.06
CD47-202ENST00000361309 LINC00208Q96KT6 92 aa8.4□□□□□ -1.06
CD47-202ENST00000361309 ATP5EP2Q5VTU8 51 aa8.36□□□□□ -1.07
CD47-202ENST00000361309 GPR98Q8WXG9 6306 aa8.26□□□□□ -1.09
CD47-202ENST00000361309 MP68P56378 58 aa8.25□□□□□ -1.09
CD47-202ENST00000361309 FAM240AA0A1B0GVK7 77 aa8.23□□□□□ -1.09
CD47-202ENST00000361309 DSTQ03001 7570 aaKnown RBP8.22□□□□□ -1.09
CD47-202ENST00000361309 DMAC1Q96GE9 116 aa8.19□□□□□ -1.1
CD47-202ENST00000361309 OCR1Q9BZK8 76 aa8.19□□□□□ -1.1
CD47-202ENST00000361309 MT-ATP8P03928 68 aa8.14□□□□□ -1.11
CD47-202ENST00000361309 LINC00643Q86TS7 51 aa8.09□□□□□ -1.11
CD47-202ENST00000361309 KRTAP4-9Q9BYQ8 210 aa8.09□□□□□ -1.11
CD47-202ENST00000361309 H3BPC8 53 aa8.05□□□□□ -1.12
CD47-202ENST00000361309 LCE5AQ5TCM9 118 aa8□□□□□ -1.13
CD47-202ENST00000361309 TRAV7A0A075B6U4 112 aa7.99□□□□□ -1.13
CD47-202ENST00000361309 PCP4L1A6NKN8 68 aa7.94□□□□□ -1.14
CD47-202ENST00000361309 KRTAP19-7Q3SYF9 63 aa7.94□□□□□ -1.14
CD47-202ENST00000361309 KRTAP19-3Q7Z4W3 81 aa7.92□□□□□ -1.14
CD47-202ENST00000361309 ACYP2P14621 99 aa7.91□□□□□ -1.14
CD47-202ENST00000361309 MT1EP04732 61 aa7.89□□□□□ -1.15
CD47-202ENST00000361309 SPTSSBQ8NFR3 76 aa7.89□□□□□ -1.15
CD47-202ENST00000361309 LCE1DQ5T752 114 aa7.84□□□□□ -1.15
CD47-202ENST00000361309 SCGB1A1P11684 91 aa7.83□□□□□ -1.16
CD47-202ENST00000361309 CAMK2N1Q7Z7J9 78 aa7.82□□□□□ -1.16
CD47-202ENST00000361309 KRTAP9-9Q9BYP9 154 aa7.78□□□□□ -1.16
CD47-202ENST00000361309 KRTAP9-4Q9BYQ2 154 aa7.78□□□□□ -1.16
CD47-202ENST00000361309 KRTAP13-4Q3LI77 160 aa7.77□□□□□ -1.17
CD47-202ENST00000361309 CYSTM1Q9H1C7 97 aa7.77□□□□□ -1.17
CD47-202ENST00000361309 CHKB-CPT1BH3BT56 60 aa7.75□□□□□ -1.17
CD47-202ENST00000361309 KRTAP4-12Q9BQ66 201 aa7.74□□□□□ -1.17
CD47-202ENST00000361309 MT4P47944 62 aa7.7□□□□□ -1.18
CD47-202ENST00000361309 HMCN1Q96RW7 5635 aa7.7□□□□□ -1.18
CD47-202ENST00000361309 LCE4AQ5TA78 99 aa7.68□□□□□ -1.18
CD47-202ENST00000361309 MT1GP13640 62 aa7.67□□□□□ -1.18
CD47-202ENST00000361309 KRTAP19-5Q3LI72 72 aa7.62□□□□□ -1.19
CD47-202ENST00000361309 A0A0D9SG42 100 aa7.61□□□□□ -1.19
CD47-202ENST00000361309 PP632Q6XCG6 107 aa7.6□□□□□ -1.19
CD47-202ENST00000361309 AHNAK2Q8IVF2 5795 aa7.58□□□□□ -1.2
CD47-202ENST00000361309 SVIPQ8NHG7 77 aa7.56□□□□□ -1.2
CD47-202ENST00000361309 MT1MQ8N339 61 aa7.55□□□□□ -1.2
CD47-202ENST00000361309 KRTAP19-4Q3LI73 84 aa7.52□□□□□ -1.21
CD47-202ENST00000361309 J3QR89 54 aa7.51□□□□□ -1.21
CD47-202ENST00000361309 KRTAP5-10Q6L8G5 202 aa7.51□□□□□ -1.21
CD47-202ENST00000361309 MT1LQ93083 61 aa7.47□□□□□ -1.21
CD47-202ENST00000361309 KRTAP4-7Q9BYR0 210 aa7.47□□□□□ -1.21
CD47-202ENST00000361309 A0A1B0GV90 55 aa7.46□□□□□ -1.22
CD47-202ENST00000361309 KRTAP5-4Q6L8H1 288 aa7.46□□□□□ -1.22
CD47-202ENST00000361309 SMIM20Q8N5G0 67 aa7.46□□□□□ -1.22
CD47-202ENST00000361309 SNURFQ9Y675 71 aa7.45□□□□□ -1.22
CD47-202ENST00000361309 KRTAP4-3Q9BYR4 195 aa7.42□□□□□ -1.22
CD47-202ENST00000361309 SPINT4Q6UDR6 99 aa7.41□□□□□ -1.22
CD47-202ENST00000361309 SPANXA2-OT1Q8N9U9 137 aa7.38□□□□□ -1.23
CD47-202ENST00000361309 SPATA8Q6RVD6 105 aa7.37□□□□□ -1.23
CD47-202ENST00000361309 KRTAP23-1A1A580 65 aa7.33□□□□□ -1.24
CD47-202ENST00000361309 KRTAP12-1P59990 96 aa7.3□□□□□ -1.24
CD47-202ENST00000361309 SEC61GP60059 68 aa7.29□□□□□ -1.24
CD47-202ENST00000361309 SERP1Q9Y6X1 66 aa7.29□□□□□ -1.24
CD47-202ENST00000361309 KRTAP5-7Q6L8G8 165 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms