RNA–Protein interactions for RNA: ENST00000360620.7

EPHB4-202, Transcript of EPH receptor B4, humanhuman

TSL 1 (best) BASIC

Gene EPHB4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-202ENST00000360620 R4GN34 69 aa6.26□□□□□ -1.41
EPHB4-202ENST00000360620 P0C880 135 aa6.25□□□□□ -1.41
EPHB4-202ENST00000360620 M0QZ58 72 aa6.23□□□□□ -1.41
EPHB4-202ENST00000360620 SACSQ9NZJ4 4579 aa6.19□□□□□ -1.42
EPHB4-202ENST00000360620 KRTAP21-3Q3LHN1 58 aa6.18□□□□□ -1.42
EPHB4-202ENST00000360620 CAMK2N1Q7Z7J9 78 aa6.17□□□□□ -1.42
EPHB4-202ENST00000360620 SEC61BP60468 96 aaKnown RBP6.16□□□□□ -1.42
EPHB4-202ENST00000360620 XP32Q5T750 250 aa6.14□□□□□ -1.43
EPHB4-202ENST00000360620 KMT2CQ8NEZ4 4911 aaKnown RBP6.14□□□□□ -1.43
EPHB4-202ENST00000360620 DYNC1H1Q14204 4646 aaKnown RBP6.13□□□□□ -1.43
EPHB4-202ENST00000360620 A0A1B0GVY2 172 aa6.09□□□□□ -1.43
EPHB4-202ENST00000360620 J3QL48 77 aa6.09□□□□□ -1.43
EPHB4-202ENST00000360620 MYCBP2O75592 4640 aa6.09□□□□□ -1.43
EPHB4-202ENST00000360620 TPRXLQ17RH7 258 aa6.06□□□□□ -1.44
EPHB4-202ENST00000360620 KRTAP13-4Q3LI77 160 aa6.06□□□□□ -1.44
EPHB4-202ENST00000360620 KRTAP10-6P60371 365 aaPredicted RBP6.06□□□□□ -1.44
EPHB4-202ENST00000360620 KIAA1109Q2LD37 5005 aa6.05□□□□□ -1.44
EPHB4-202ENST00000360620 LRP1Q07954 4544 aaKnown RBP6.03□□□□□ -1.44
EPHB4-202ENST00000360620 KRTAP12-2P59991 146 aa6.03□□□□□ -1.44
EPHB4-202ENST00000360620 APOBP04114 4563 aaKnown RBP6.01□□□□□ -1.45
EPHB4-202ENST00000360620 KRTAP10-8P60410 259 aa6.01□□□□□ -1.45
EPHB4-202ENST00000360620 RYR2Q92736 4967 aa5.99□□□□□ -1.45
EPHB4-202ENST00000360620 FAT3Q8TDW7 4589 aa5.98□□□□□ -1.45
EPHB4-202ENST00000360620 KRTAP12-1P59990 96 aa5.95□□□□□ -1.46
EPHB4-202ENST00000360620 RYR3Q15413 4870 aa5.94□□□□□ -1.46
EPHB4-202ENST00000360620 KRTAP3-3Q9BYR6 98 aa5.93□□□□□ -1.46
EPHB4-202ENST00000360620 PKHD1L1Q86WI1 4243 aa5.93□□□□□ -1.46
EPHB4-202ENST00000360620 RYR1P21817 5038 aa5.93□□□□□ -1.46
EPHB4-202ENST00000360620 KRTAP3-2Q9BYR7 98 aa5.92□□□□□ -1.46
EPHB4-202ENST00000360620 KRTAP10-4P60372 401 aaPredicted RBP5.9□□□□□ -1.46
EPHB4-202ENST00000360620 PLAC4Q8WY50 150 aa5.89□□□□□ -1.47
EPHB4-202ENST00000360620 KRTAP4-5Q9BYR2 181 aa5.88□□□□□ -1.47
EPHB4-202ENST00000360620 KRTAP17-1Q9BYP8 105 aa5.86□□□□□ -1.47
EPHB4-202ENST00000360620 TNXBP22105 4242 aa5.8□□□□□ -1.48
EPHB4-202ENST00000360620 KRTAP15-1Q3LI76 137 aa5.8□□□□□ -1.48
EPHB4-202ENST00000360620 HSPG2P98160 4391 aa5.78□□□□□ -1.48
EPHB4-202ENST00000360620 EPPK1P58107 5090 aaKnown RBP5.76□□□□□ -1.49
EPHB4-202ENST00000360620 PP632Q6XCG6 107 aa5.75□□□□□ -1.49
EPHB4-202ENST00000360620 M0R2T5 61 aa5.73□□□□□ -1.49
EPHB4-202ENST00000360620 TNP1P09430 55 aa5.71□□□□□ -1.49
EPHB4-202ENST00000360620 MT1HL1P0DM35 61 aa5.71□□□□□ -1.49
EPHB4-202ENST00000360620 LPAP08519 4548 aa5.67□□□□□ -1.5
EPHB4-202ENST00000360620 LRP2P98164 4655 aa5.66□□□□□ -1.5
EPHB4-202ENST00000360620 ABCA13Q86UQ4 5058 aa5.6□□□□□ -1.51
EPHB4-202ENST00000360620 HERC2O95714 4834 aa5.55□□□□□ -1.52
EPHB4-202ENST00000360620 MUC2Q02817 5179 aa5.48□□□□□ -1.53
EPHB4-202ENST00000360620 LORP23490 312 aaPredicted RBP5.46□□□□□ -1.54
EPHB4-202ENST00000360620 HERC1Q15751 4861 aa5.38□□□□□ -1.55
EPHB4-202ENST00000360620 KRTAP4-1Q9BYQ7 146 aa5.37□□□□□ -1.55
EPHB4-202ENST00000360620 RNF213Q63HN8 5207 aa5.32□□□□□ -1.56
EPHB4-202ENST00000360620 KRTAP10-10P60014 251 aa5.29□□□□□ -1.56
EPHB4-202ENST00000360620 PRO2289Q9P1D8 64 aa5.25□□□□□ -1.57
EPHB4-202ENST00000360620 MUC17Q685J3 4493 aa5.24□□□□□ -1.57
EPHB4-202ENST00000360620 PCLOQ9Y6V0 5065 aa5.23□□□□□ -1.57
EPHB4-202ENST00000360620 FAT4Q6V0I7 4981 aa5.22□□□□□ -1.57
EPHB4-202ENST00000360620 BIRC6Q9NR09 4857 aa5.22□□□□□ -1.57
EPHB4-202ENST00000360620 UBR4Q5T4S7 5183 aa5.18□□□□□ -1.58
EPHB4-202ENST00000360620 KRTAP23-1A1A580 65 aa5.12□□□□□ -1.59
EPHB4-202ENST00000360620 LCE3AQ5TA76 89 aa5.04□□□□□ -1.6
EPHB4-202ENST00000360620 INE1O15225 51 aa5□□□□□ -1.61
EPHB4-202ENST00000360620 HMCN2Q8NDA2 5059 aa4.97□□□□□ -1.61
EPHB4-202ENST00000360620 KRTAP19-2Q3LHN2 52 aa4.96□□□□□ -1.61
EPHB4-202ENST00000360620 FLGP20930 4061 aaPredicted RBP4.96□□□□□ -1.62
EPHB4-202ENST00000360620 KRTAP10-12P60413 245 aa4.92□□□□□ -1.62
EPHB4-202ENST00000360620 FSIP2Q5CZC0 6907 aa4.91□□□□□ -1.62
EPHB4-202ENST00000360620 KRTAP12-3P60328 96 aa4.9□□□□□ -1.62
EPHB4-202ENST00000360620 SPRR2GQ9BYE4 73 aa4.87□□□□□ -1.63
EPHB4-202ENST00000360620 MT1HP80294 61 aa4.84□□□□□ -1.64
EPHB4-202ENST00000360620 SPRR5A0A1B0GTR4 108 aa4.79□□□□□ -1.64
EPHB4-202ENST00000360620 LCE2CQ5TA81 110 aa4.78□□□□□ -1.64
EPHB4-202ENST00000360620 KRTAP19-1Q8IUB9 90 aa4.77□□□□□ -1.65
EPHB4-202ENST00000360620 MT1FP04733 61 aa4.77□□□□□ -1.65
EPHB4-202ENST00000360620 MT2AP02795 61 aa4.75□□□□□ -1.65
EPHB4-202ENST00000360620 KRTAP8-1Q8IUC2 63 aa4.73□□□□□ -1.65
EPHB4-202ENST00000360620 USH2AO75445 5202 aa4.71□□□□□ -1.66
EPHB4-202ENST00000360620 KRTAP9-8Q9BYQ0 159 aa4.59□□□□□ -1.67
EPHB4-202ENST00000360620 KRTAP19-8Q3LI54 63 aa4.56□□□□□ -1.68
EPHB4-202ENST00000360620 MT1XP80297 61 aa4.54□□□□□ -1.68
EPHB4-202ENST00000360620 KRTAP10-7P60409 375 aaPredicted RBP4.53□□□□□ -1.68
EPHB4-202ENST00000360620 KRTAP10-5P60370 271 aa4.52□□□□□ -1.69
EPHB4-202ENST00000360620 MT1BP07438 61 aa4.51□□□□□ -1.69
EPHB4-202ENST00000360620 KMT2DO14686 5537 aa4.5□□□□□ -1.69
EPHB4-202ENST00000360620 KRTAP19-5Q3LI72 72 aa4.5□□□□□ -1.69
EPHB4-202ENST00000360620 LCE3CQ5T5A8 94 aa4.46□□□□□ -1.7
EPHB4-202ENST00000360620 KRTAP9-3Q9BYQ3 159 aa4.39□□□□□ -1.71
EPHB4-202ENST00000360620 CRCT1Q9UGL9 99 aa4.37□□□□□ -1.71
EPHB4-202ENST00000360620 LCE2BO14633 110 aa4.37□□□□□ -1.71
EPHB4-202ENST00000360620 KRTAP4-8A0A0G2JLE6 195 aa4.34□□□□□ -1.72
EPHB4-202ENST00000360620 KRTAP4-8Q9BYQ9 185 aa4.34□□□□□ -1.72
EPHB4-202ENST00000360620 OBSCNQ5VST9 7968 aa4.32□□□□□ -1.72
EPHB4-202ENST00000360620 DSTQ03001 7570 aaKnown RBP4.24□□□□□ -1.73
EPHB4-202ENST00000360620 LCE2AQ5TA79 106 aaPredicted RBP4.19□□□□□ -1.74
EPHB4-202ENST00000360620 SYNE1Q8NF91 8797 aaKnown RBP4.16□□□□□ -1.74
EPHB4-202ENST00000360620 KRTAP4-7Q9BYR0 210 aa4.15□□□□□ -1.74
EPHB4-202ENST00000360620 KRTAP19-4Q3LI73 84 aa4.11□□□□□ -1.75
EPHB4-202ENST00000360620 SSPOA2VEC9 5147 aa4.11□□□□□ -1.75
EPHB4-202ENST00000360620 FCGBPQ9Y6R7 5405 aaPredicted RBP4.1□□□□□ -1.75
EPHB4-202ENST00000360620 MUC12Q9UKN1 5478 aa4.07□□□□□ -1.76
EPHB4-202ENST00000360620 MT1LQ93083 61 aa4.01□□□□□ -1.77
EPHB4-202ENST00000360620 KRTAP9-6A8MVA2 160 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms