RNA–Protein interactions for RNA: ENST00000360110.8

TFRC-201, Transcript of transferrin receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TFRC, Length 5,111 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-201ENST00000360110 CMYA5Q8N3K9 4069 aa4.5□□□□□ -1.69
TFRC-201ENST00000360110 LRP1BQ9NZR2 4599 aa4.5□□□□□ -1.69
TFRC-201ENST00000360110 DNAH6Q9C0G6 4158 aa4.45□□□□□ -1.7
TFRC-201ENST00000360110 KRTAP3-2Q9BYR7 98 aa4.45□□□□□ -1.7
TFRC-201ENST00000360110 ALMS1Q8TCU4 4167 aa4.45□□□□□ -1.7
TFRC-201ENST00000360110 DNAH17Q9UFH2 4485 aa4.45□□□□□ -1.7
TFRC-201ENST00000360110 M0R2T5 61 aa4.44□□□□□ -1.7
TFRC-201ENST00000360110 KRTAP3-3Q9BYR6 98 aa4.44□□□□□ -1.7
TFRC-201ENST00000360110 DNAH5Q8TE73 4624 aa4.43□□□□□ -1.7
TFRC-201ENST00000360110 FAT3Q8TDW7 4589 aa4.41□□□□□ -1.7
TFRC-201ENST00000360110 VPS13DQ5THJ4 4388 aa4.4□□□□□ -1.7
TFRC-201ENST00000360110 SEC61BP60468 96 aaKnown RBP4.4□□□□□ -1.7
TFRC-201ENST00000360110 A0A1B0GVY2 172 aa4.4□□□□□ -1.71
TFRC-201ENST00000360110 TNP1P09430 55 aa4.4□□□□□ -1.71
TFRC-201ENST00000360110 DNAH2Q9P225 4427 aa4.4□□□□□ -1.71
TFRC-201ENST00000360110 PP632Q6XCG6 107 aa4.34□□□□□ -1.71
TFRC-201ENST00000360110 HYDINQ4G0P3 5121 aa4.33□□□□□ -1.72
TFRC-201ENST00000360110 LRP1Q07954 4544 aaKnown RBP4.32□□□□□ -1.72
TFRC-201ENST00000360110 VPS13BQ7Z7G8 4022 aa4.32□□□□□ -1.72
TFRC-201ENST00000360110 PKHD1P08F94 4074 aa4.32□□□□□ -1.72
TFRC-201ENST00000360110 HECTD4Q9Y4D8 3996 aa4.29□□□□□ -1.72
TFRC-201ENST00000360110 DYNC1H1Q14204 4646 aaKnown RBP4.29□□□□□ -1.72
TFRC-201ENST00000360110 KIAA1109Q2LD37 5005 aa4.26□□□□□ -1.73
TFRC-201ENST00000360110 DNAH3Q8TD57 4116 aa4.25□□□□□ -1.73
TFRC-201ENST00000360110 RYR1P21817 5038 aa4.23□□□□□ -1.73
TFRC-201ENST00000360110 SACSQ9NZJ4 4579 aa4.22□□□□□ -1.73
TFRC-201ENST00000360110 LORP23490 312 aaPredicted RBP4.2□□□□□ -1.74
TFRC-201ENST00000360110 APOBP04114 4563 aaKnown RBP4.19□□□□□ -1.74
TFRC-201ENST00000360110 FAT2Q9NYQ8 4349 aa4.18□□□□□ -1.74
TFRC-201ENST00000360110 DYNC2H1Q8NCM8 4307 aaKnown RBP4.17□□□□□ -1.74
TFRC-201ENST00000360110 KMT2CQ8NEZ4 4911 aaKnown RBP4.16□□□□□ -1.74
TFRC-201ENST00000360110 LRP2P98164 4655 aa4.13□□□□□ -1.75
TFRC-201ENST00000360110 RYR3Q15413 4870 aa4.11□□□□□ -1.75
TFRC-201ENST00000360110 KRTAP10-4P60372 401 aaPredicted RBP4.1□□□□□ -1.75
TFRC-201ENST00000360110 KRTAP4-5Q9BYR2 181 aa4.09□□□□□ -1.76
TFRC-201ENST00000360110 KRTAP10-10P60014 251 aa4.01□□□□□ -1.77
TFRC-201ENST00000360110 EPPK1P58107 5090 aaKnown RBP4.01□□□□□ -1.77
TFRC-201ENST00000360110 HSPG2P98160 4391 aa4.01□□□□□ -1.77
TFRC-201ENST00000360110 KRTAP17-1Q9BYP8 105 aa4□□□□□ -1.77
TFRC-201ENST00000360110 MT1HL1P0DM35 61 aa4□□□□□ -1.77
TFRC-201ENST00000360110 LPAP08519 4548 aa3.99□□□□□ -1.77
TFRC-201ENST00000360110 MUC2Q02817 5179 aa3.94□□□□□ -1.78
TFRC-201ENST00000360110 PRO2289Q9P1D8 64 aa3.94□□□□□ -1.78
TFRC-201ENST00000360110 PKD1P98161 4303 aa3.94□□□□□ -1.78
TFRC-201ENST00000360110 RYR2Q92736 4967 aa3.9□□□□□ -1.78
TFRC-201ENST00000360110 LCE3AQ5TA76 89 aa3.89□□□□□ -1.79
TFRC-201ENST00000360110 INE1O15225 51 aa3.85□□□□□ -1.79
TFRC-201ENST00000360110 ABCA13Q86UQ4 5058 aa3.84□□□□□ -1.79
TFRC-201ENST00000360110 HERC2O95714 4834 aa3.83□□□□□ -1.8
TFRC-201ENST00000360110 KRTAP4-1Q9BYQ7 146 aa3.83□□□□□ -1.8
TFRC-201ENST00000360110 PKHD1L1Q86WI1 4243 aa3.81□□□□□ -1.8
TFRC-201ENST00000360110 RNF213Q63HN8 5207 aa3.8□□□□□ -1.8
TFRC-201ENST00000360110 FAT4Q6V0I7 4981 aa3.79□□□□□ -1.8
TFRC-201ENST00000360110 PCLOQ9Y6V0 5065 aa3.78□□□□□ -1.8
TFRC-201ENST00000360110 KRTAP12-3P60328 96 aa3.74□□□□□ -1.81
TFRC-201ENST00000360110 KRTAP10-12P60413 245 aa3.72□□□□□ -1.81
TFRC-201ENST00000360110 HERC1Q15751 4861 aa3.72□□□□□ -1.81
TFRC-201ENST00000360110 BIRC6Q9NR09 4857 aa3.72□□□□□ -1.81
TFRC-201ENST00000360110 TNXBP22105 4242 aa3.67□□□□□ -1.82
TFRC-201ENST00000360110 KRTAP23-1A1A580 65 aa3.66□□□□□ -1.82
TFRC-201ENST00000360110 FSIP2Q5CZC0 6907 aa3.66□□□□□ -1.82
TFRC-201ENST00000360110 CRCT1Q9UGL9 99 aa3.62□□□□□ -1.83
TFRC-201ENST00000360110 UBR4Q5T4S7 5183 aa3.6□□□□□ -1.83
TFRC-201ENST00000360110 OBSCNQ5VST9 7968 aa3.6□□□□□ -1.83
TFRC-201ENST00000360110 HMCN2Q8NDA2 5059 aa3.58□□□□□ -1.84
TFRC-201ENST00000360110 SPRR5A0A1B0GTR4 108 aa3.55□□□□□ -1.84
TFRC-201ENST00000360110 SPRR2GQ9BYE4 73 aa3.47□□□□□ -1.85
TFRC-201ENST00000360110 MT1FP04733 61 aa3.45□□□□□ -1.86
TFRC-201ENST00000360110 USH2AO75445 5202 aa3.45□□□□□ -1.86
TFRC-201ENST00000360110 KRTAP8-1Q8IUC2 63 aa3.45□□□□□ -1.86
TFRC-201ENST00000360110 KRTAP19-1Q8IUB9 90 aa3.45□□□□□ -1.86
TFRC-201ENST00000360110 KRTAP10-5P60370 271 aa3.44□□□□□ -1.86
TFRC-201ENST00000360110 MT2AP02795 61 aa3.43□□□□□ -1.86
TFRC-201ENST00000360110 KRTAP10-7P60409 375 aaPredicted RBP3.43□□□□□ -1.86
TFRC-201ENST00000360110 KRTAP19-5Q3LI72 72 aa3.42□□□□□ -1.86
TFRC-201ENST00000360110 MUC17Q685J3 4493 aa3.41□□□□□ -1.86
TFRC-201ENST00000360110 MT1HP80294 61 aa3.4□□□□□ -1.87
TFRC-201ENST00000360110 SYNE1Q8NF91 8797 aaKnown RBP3.39□□□□□ -1.87
TFRC-201ENST00000360110 LCE3CQ5T5A8 94 aa3.37□□□□□ -1.87
TFRC-201ENST00000360110 KMT2DO14686 5537 aa3.37□□□□□ -1.87
TFRC-201ENST00000360110 KRTAP19-2Q3LHN2 52 aa3.33□□□□□ -1.88
TFRC-201ENST00000360110 DSTQ03001 7570 aaKnown RBP3.33□□□□□ -1.88
TFRC-201ENST00000360110 FLGP20930 4061 aaPredicted RBP3.32□□□□□ -1.88
TFRC-201ENST00000360110 MT1XP80297 61 aa3.32□□□□□ -1.88
TFRC-201ENST00000360110 LCE2CQ5TA81 110 aa3.28□□□□□ -1.88
TFRC-201ENST00000360110 KRTAP4-7Q9BYR0 210 aa3.28□□□□□ -1.88
TFRC-201ENST00000360110 KRTAP4-8A0A0G2JLE6 195 aa3.27□□□□□ -1.89
TFRC-201ENST00000360110 KRTAP4-8Q9BYQ9 185 aa3.27□□□□□ -1.89
TFRC-201ENST00000360110 MT1BP07438 61 aa3.24□□□□□ -1.89
TFRC-201ENST00000360110 FCGBPQ9Y6R7 5405 aaPredicted RBP3.24□□□□□ -1.89
TFRC-201ENST00000360110 KRTAP9-8Q9BYQ0 159 aa3.19□□□□□ -1.9
TFRC-201ENST00000360110 KRTAP12-4P60329 112 aa3.18□□□□□ -1.9
TFRC-201ENST00000360110 KRTAP19-8Q3LI54 63 aa3.18□□□□□ -1.9
TFRC-201ENST00000360110 MT1GP13640 62 aa3.1□□□□□ -1.91
TFRC-201ENST00000360110 LCE3BQ5TA77 95 aa3.09□□□□□ -1.91
TFRC-201ENST00000360110 LOC100996750A0A140TA64 210 aa3.04□□□□□ -1.92
TFRC-201ENST00000360110 KRTAP9-6A8MVA2 160 aa3.04□□□□□ -1.92
TFRC-201ENST00000360110 LCE2BO14633 110 aa3.04□□□□□ -1.92
TFRC-201ENST00000360110 KRTAP9-3Q9BYQ3 159 aa3.04□□□□□ -1.92
TFRC-201ENST00000360110 MUC12Q9UKN1 5478 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms