RNA–Protein interactions for RNA: ENST00000359461.10

YIF1A-201, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene YIF1A, Length 943 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-201ENST00000359461 SPRR2AP35326 72 aa9.79□□□□□ -0.84
YIF1A-201ENST00000359461 SPCS1Q9Y6A9 102 aa9.78□□□□□ -0.84
YIF1A-201ENST00000359461 H0YAA0 97 aa9.75□□□□□ -0.85
YIF1A-201ENST00000359461 PRO0461Q9UI25 63 aa9.72□□□□□ -0.85
YIF1A-201ENST00000359461 LOC105371267A0A1B0GV96 52 aa9.71□□□□□ -0.86
YIF1A-201ENST00000359461 MT1XP80297 61 aa9.71□□□□□ -0.86
YIF1A-201ENST00000359461 PRO2289Q9P1D8 64 aa9.7□□□□□ -0.86
YIF1A-201ENST00000359461 LOC101927531A0A1B0GV80 90 aa9.65□□□□□ -0.86
YIF1A-201ENST00000359461 TRAV22A0A0B4J277 110 aa9.64□□□□□ -0.87
YIF1A-201ENST00000359461 LCE1AQ5T7P2 110 aa9.64□□□□□ -0.87
YIF1A-201ENST00000359461 KRTAP8-1Q8IUC2 63 aa9.63□□□□□ -0.87
YIF1A-201ENST00000359461 A8MUN3 132 aa9.62□□□□□ -0.87
YIF1A-201ENST00000359461 NDUFC1O43677 76 aa9.62□□□□□ -0.87
YIF1A-201ENST00000359461 KRTAP2-2Q9BYT5 123 aa9.61□□□□□ -0.87
YIF1A-201ENST00000359461 KRTAP2-1Q9BYU5 128 aa9.61□□□□□ -0.87
YIF1A-201ENST00000359461 K7EP34 96 aa9.58□□□□□ -0.88
YIF1A-201ENST00000359461 KRTAP12-2P59991 146 aa9.58□□□□□ -0.88
YIF1A-201ENST00000359461 ADM2Q7Z4H4 148 aa9.56□□□□□ -0.88
YIF1A-201ENST00000359461 PLAC4Q8WY50 150 aa9.5□□□□□ -0.89
YIF1A-201ENST00000359461 SPRR2DP22532 72 aa9.47□□□□□ -0.89
YIF1A-201ENST00000359461 COL5A1-AS1Q5SY13 56 aa9.46□□□□□ -0.9
YIF1A-201ENST00000359461 ACYP1P07311 99 aa9.43□□□□□ -0.9
YIF1A-201ENST00000359461 KRTAP4-8A0A0G2JLE6 195 aa9.41□□□□□ -0.9
YIF1A-201ENST00000359461 ATOX1O00244 68 aa9.41□□□□□ -0.9
YIF1A-201ENST00000359461 KRTAP4-8Q9BYQ9 185 aa9.41□□□□□ -0.9
YIF1A-201ENST00000359461 H0Y9P7 68 aa9.4□□□□□ -0.9
YIF1A-201ENST00000359461 UQCRQO14949 82 aa9.4□□□□□ -0.9
YIF1A-201ENST00000359461 ETDBQ3ZM63 59 aa9.36□□□□□ -0.91
YIF1A-201ENST00000359461 R4GN34 69 aa9.36□□□□□ -0.91
YIF1A-201ENST00000359461 F8W1H4 67 aa9.33□□□□□ -0.92
YIF1A-201ENST00000359461 P0C880 135 aa9.32□□□□□ -0.92
YIF1A-201ENST00000359461 GTF2H5Q6ZYL4 71 aa9.29□□□□□ -0.92
YIF1A-201ENST00000359461 M0QZ58 72 aa9.26□□□□□ -0.93
YIF1A-201ENST00000359461 LCE3BQ5TA77 95 aa9.26□□□□□ -0.93
YIF1A-201ENST00000359461 ATP5EP2Q5VTU8 51 aa9.26□□□□□ -0.93
YIF1A-201ENST00000359461 C20orf197Q8N268 126 aa9.26□□□□□ -0.93
YIF1A-201ENST00000359461 KRTAP10-7P60409 375 aaPredicted RBP9.23□□□□□ -0.93
YIF1A-201ENST00000359461 KRTAP10-12P60413 245 aa9.22□□□□□ -0.93
YIF1A-201ENST00000359461 HIST1H4AP62805 103 aaKnown RBP9.22□□□□□ -0.93
YIF1A-201ENST00000359461 LINC00208Q96KT6 92 aa9.2□□□□□ -0.94
YIF1A-201ENST00000359461 KRTAP3-2Q9BYR7 98 aa9.18□□□□□ -0.94
YIF1A-201ENST00000359461 FAM240AA0A1B0GVK7 77 aa9.16□□□□□ -0.94
YIF1A-201ENST00000359461 PCP4L1A6NKN8 68 aa9.13□□□□□ -0.95
YIF1A-201ENST00000359461 LINC01554Q52M75 96 aa9.12□□□□□ -0.95
YIF1A-201ENST00000359461 OCR1Q9BZK8 76 aa9.06□□□□□ -0.96
YIF1A-201ENST00000359461 MP68P56378 58 aa9.05□□□□□ -0.96
YIF1A-201ENST00000359461 DMAC1Q96GE9 116 aa9.04□□□□□ -0.96
YIF1A-201ENST00000359461 LINC00643Q86TS7 51 aa8.95□□□□□ -0.98
YIF1A-201ENST00000359461 GPR98Q8WXG9 6306 aa8.92□□□□□ -0.98
YIF1A-201ENST00000359461 H3BPC8 53 aa8.9□□□□□ -0.98
YIF1A-201ENST00000359461 MT-ATP8P03928 68 aa8.84□□□□□ -0.99
YIF1A-201ENST00000359461 DSTQ03001 7570 aaKnown RBP8.82□□□□□ -1
YIF1A-201ENST00000359461 TRAV7A0A075B6U4 112 aa8.81□□□□□ -1
YIF1A-201ENST00000359461 LCE5AQ5TCM9 118 aa8.76□□□□□ -1.01
YIF1A-201ENST00000359461 KRTAP4-9Q9BYQ8 210 aa8.72□□□□□ -1.01
YIF1A-201ENST00000359461 KRTAP19-7Q3SYF9 63 aa8.69□□□□□ -1.02
YIF1A-201ENST00000359461 ACYP2P14621 99 aa8.66□□□□□ -1.02
YIF1A-201ENST00000359461 KRTAP19-3Q7Z4W3 81 aa8.65□□□□□ -1.02
YIF1A-201ENST00000359461 SPTSSBQ8NFR3 76 aa8.64□□□□□ -1.03
YIF1A-201ENST00000359461 MT1EP04732 61 aa8.63□□□□□ -1.03
YIF1A-201ENST00000359461 A0A1B0GV90 55 aa8.62□□□□□ -1.03
YIF1A-201ENST00000359461 SCGB1A1P11684 91 aa8.57□□□□□ -1.04
YIF1A-201ENST00000359461 KRTAP13-4Q3LI77 160 aa8.53□□□□□ -1.04
YIF1A-201ENST00000359461 CAMK2N1Q7Z7J9 78 aa8.51□□□□□ -1.05
YIF1A-201ENST00000359461 LCE1DQ5T752 114 aa8.5□□□□□ -1.05
YIF1A-201ENST00000359461 CHKB-CPT1BH3BT56 60 aa8.46□□□□□ -1.06
YIF1A-201ENST00000359461 CYSTM1Q9H1C7 97 aa8.45□□□□□ -1.06
YIF1A-201ENST00000359461 J3QR89 54 aa8.38□□□□□ -1.07
YIF1A-201ENST00000359461 MT1GP13640 62 aa8.38□□□□□ -1.07
YIF1A-201ENST00000359461 LCE4AQ5TA78 99 aa8.37□□□□□ -1.07
YIF1A-201ENST00000359461 HMCN1Q96RW7 5635 aa8.37□□□□□ -1.07
YIF1A-201ENST00000359461 KRTAP19-5Q3LI72 72 aa8.31□□□□□ -1.08
YIF1A-201ENST00000359461 MT4P47944 62 aa8.3□□□□□ -1.08
YIF1A-201ENST00000359461 PP632Q6XCG6 107 aa8.29□□□□□ -1.08
YIF1A-201ENST00000359461 A0A0D9SG42 100 aa8.28□□□□□ -1.08
YIF1A-201ENST00000359461 SMIM20Q8N5G0 67 aa8.27□□□□□ -1.09
YIF1A-201ENST00000359461 MT1MQ8N339 61 aa8.25□□□□□ -1.09
YIF1A-201ENST00000359461 AHNAK2Q8IVF2 5795 aa8.21□□□□□ -1.1
YIF1A-201ENST00000359461 SPANXA2-OT1Q8N9U9 137 aa8.19□□□□□ -1.1
YIF1A-201ENST00000359461 KRTAP5-4Q6L8H1 288 aa8.18□□□□□ -1.1
YIF1A-201ENST00000359461 KRTAP5-10Q6L8G5 202 aa8.17□□□□□ -1.1
YIF1A-201ENST00000359461 MT1LQ93083 61 aa8.17□□□□□ -1.1
YIF1A-201ENST00000359461 SNURFQ9Y675 71 aa8.17□□□□□ -1.1
YIF1A-201ENST00000359461 KRTAP4-6Q9BYQ5 205 aa8.05□□□□□ -1.12
YIF1A-201ENST00000359461 KRTAP4-3Q9BYR4 195 aa8.05□□□□□ -1.12
YIF1A-201ENST00000359461 SPATA8Q6RVD6 105 aa8.04□□□□□ -1.12
YIF1A-201ENST00000359461 SPINT4Q6UDR6 99 aa8.04□□□□□ -1.12
YIF1A-201ENST00000359461 KRTAP12-1P59990 96 aa8.02□□□□□ -1.13
YIF1A-201ENST00000359461 K7ERU9 68 aa7.99□□□□□ -1.13
YIF1A-201ENST00000359461 COA5Q86WW8 74 aa7.97□□□□□ -1.13
YIF1A-201ENST00000359461 SEC61GP60059 68 aa7.96□□□□□ -1.14
YIF1A-201ENST00000359461 SERP1Q9Y6X1 66 aa7.96□□□□□ -1.14
YIF1A-201ENST00000359461 A0A1B0GU33 70 aa7.91□□□□□ -1.14
YIF1A-201ENST00000359461 KRTAP5-7Q6L8G8 165 aa7.91□□□□□ -1.14
YIF1A-201ENST00000359461 C10orf95Q9H7T3 257 aa7.91□□□□□ -1.14
YIF1A-201ENST00000359461 LCE3AQ5TA76 89 aa7.89□□□□□ -1.15
YIF1A-201ENST00000359461 SERP2Q8N6R1 65 aa7.87□□□□□ -1.15
YIF1A-201ENST00000359461 KRTAP5-3Q6L8H2 238 aa7.85□□□□□ -1.15
YIF1A-201ENST00000359461 TNP1P09430 55 aa7.73□□□□□ -1.17
YIF1A-201ENST00000359461 KRTAP20-2Q3LI61 65 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms