RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 KIAA1109Q2LD37 5005 aa2.98□□□□□ -1.93
ATXN3-202ENST00000359366 KRTAP16-1A8MUX0 517 aa2.98□□□□□ -1.93
ATXN3-202ENST00000359366 SPINK6Q6UWN8 80 aa2.98□□□□□ -1.93
ATXN3-202ENST00000359366 LRP1Q07954 4544 aaKnown RBP2.97□□□□□ -1.93
ATXN3-202ENST00000359366 KRTAP1-4P0C5Y4 121 aa2.97□□□□□ -1.93
ATXN3-202ENST00000359366 MIR22HGQ0VDD5 57 aa2.97□□□□□ -1.93
ATXN3-202ENST00000359366 SPATA8Q6RVD6 105 aa2.97□□□□□ -1.93
ATXN3-202ENST00000359366 LINC00472Q9H8W2 130 aa2.97□□□□□ -1.93
ATXN3-202ENST00000359366 Q96NJ1 140 aa2.97□□□□□ -1.93
ATXN3-202ENST00000359366 PKHD1L1Q86WI1 4243 aa2.96□□□□□ -1.94
ATXN3-202ENST00000359366 MYCBP2O75592 4640 aa2.95□□□□□ -1.94
ATXN3-202ENST00000359366 RYR1P21817 5038 aa2.95□□□□□ -1.94
ATXN3-202ENST00000359366 A8MWP4 228 aa2.94□□□□□ -1.94
ATXN3-202ENST00000359366 KRTAP10-4P60372 401 aaPredicted RBP2.94□□□□□ -1.94
ATXN3-202ENST00000359366 DMBT1Q9UGM3 2413 aaPredicted RBP2.93□□□□□ -1.94
ATXN3-202ENST00000359366 BIRC6Q9NR09 4857 aa2.93□□□□□ -1.94
ATXN3-202ENST00000359366 UQCR11O14957 56 aa2.93□□□□□ -1.94
ATXN3-202ENST00000359366 TYMSOSQ8TAI1 123 aa2.93□□□□□ -1.94
ATXN3-202ENST00000359366 SSBP3-AS1Q7Z2R9 100 aa2.92□□□□□ -1.94
ATXN3-202ENST00000359366 UBR4Q5T4S7 5183 aa2.92□□□□□ -1.94
ATXN3-202ENST00000359366 KRTAP25-1Q3LHN0 102 aa2.92□□□□□ -1.94
ATXN3-202ENST00000359366 MMP24-AS1A0A0U1RRL7 71 aa2.91□□□□□ -1.94
ATXN3-202ENST00000359366 KRTAP29-1A8MX34 341 aaPredicted RBP2.91□□□□□ -1.94
ATXN3-202ENST00000359366 TNXBP22105 4242 aa2.91□□□□□ -1.94
ATXN3-202ENST00000359366 A0A1B0GVX0 72 aa2.9□□□□□ -1.95
ATXN3-202ENST00000359366 K7ERS5 55 aa2.9□□□□□ -1.95
ATXN3-202ENST00000359366 Q5VSD8 79 aa2.9□□□□□ -1.95
ATXN3-202ENST00000359366 TP53AIP1Q9HCN2 124 aa2.9□□□□□ -1.95
ATXN3-202ENST00000359366 C8orf17Q9NRJ1 99 aa2.9□□□□□ -1.95
ATXN3-202ENST00000359366 DMAC1Q96GE9 116 aa2.89□□□□□ -1.95
ATXN3-202ENST00000359366 LINC00304Q8N9R0 145 aa2.88□□□□□ -1.95
ATXN3-202ENST00000359366 A0A1B0GU69 56 aa2.88□□□□□ -1.95
ATXN3-202ENST00000359366 HRES1P13985 223 aa2.87□□□□□ -1.95
ATXN3-202ENST00000359366 FAT3Q8TDW7 4589 aa2.87□□□□□ -1.95
ATXN3-202ENST00000359366 KRTAP3-1Q9BYR8 98 aa2.87□□□□□ -1.95
ATXN3-202ENST00000359366 P0C880 135 aa2.86□□□□□ -1.95
ATXN3-202ENST00000359366 C20orf166-AS1Q96NR2 134 aa2.86□□□□□ -1.95
ATXN3-202ENST00000359366 ACYP2P14621 99 aa2.85□□□□□ -1.95
ATXN3-202ENST00000359366 C9orf92A6NGG3 77 aa2.85□□□□□ -1.95
ATXN3-202ENST00000359366 SPINK1P00995 79 aa2.85□□□□□ -1.95
ATXN3-202ENST00000359366 Q8N1X5 172 aa2.85□□□□□ -1.95
ATXN3-202ENST00000359366 MRPL34Q9BQ48 92 aaKnown RBP2.85□□□□□ -1.95
ATXN3-202ENST00000359366 ABCA13Q86UQ4 5058 aa2.85□□□□□ -1.95
ATXN3-202ENST00000359366 LUZP6Q538Z0 58 aa2.84□□□□□ -1.95
ATXN3-202ENST00000359366 Q5W150 140 aa2.84□□□□□ -1.95
ATXN3-202ENST00000359366 KRTAP23-1A1A580 65 aa2.83□□□□□ -1.96
ATXN3-202ENST00000359366 PCOTHQ58A44 107 aa2.83□□□□□ -1.96
ATXN3-202ENST00000359366 MUC5BQ9HC84 5762 aaPredicted RBP2.81□□□□□ -1.96
ATXN3-202ENST00000359366 A8MUU9 505 aa2.81□□□□□ -1.96
ATXN3-202ENST00000359366 KRTAP10-8P60410 259 aa2.8□□□□□ -1.96
ATXN3-202ENST00000359366 HERC2O95714 4834 aa2.79□□□□□ -1.96
ATXN3-202ENST00000359366 KRTAP13-3Q3SY46 172 aa2.79□□□□□ -1.96
ATXN3-202ENST00000359366 GPR98Q8WXG9 6306 aa2.79□□□□□ -1.96
ATXN3-202ENST00000359366 NDUFAF8A1L188 74 aa2.78□□□□□ -1.96
ATXN3-202ENST00000359366 MT1HL1P0DM35 61 aa2.78□□□□□ -1.96
ATXN3-202ENST00000359366 LPAP08519 4548 aa2.78□□□□□ -1.96
ATXN3-202ENST00000359366 IGKV2D-30A0A075B6S6 120 aa2.77□□□□□ -1.97
ATXN3-202ENST00000359366 IGKV2-30P06310 120 aa2.77□□□□□ -1.97
ATXN3-202ENST00000359366 RPS29P62273 56 aaKnown RBP2.77□□□□□ -1.97
ATXN3-202ENST00000359366 SPINT4Q6UDR6 99 aa2.76□□□□□ -1.97
ATXN3-202ENST00000359366 LRP2P98164 4655 aa2.75□□□□□ -1.97
ATXN3-202ENST00000359366 KRTAP5-11Q6L8G4 156 aa2.75□□□□□ -1.97
ATXN3-202ENST00000359366 CAMK2N1Q7Z7J9 78 aa2.74□□□□□ -1.97
ATXN3-202ENST00000359366 KRTAP15-1Q3LI76 137 aa2.73□□□□□ -1.97
ATXN3-202ENST00000359366 HERC1Q15751 4861 aa2.72□□□□□ -1.97
ATXN3-202ENST00000359366 KRTAP10-7P60409 375 aaPredicted RBP2.71□□□□□ -1.98
ATXN3-202ENST00000359366 MUC2Q02817 5179 aa2.66□□□□□ -1.98
ATXN3-202ENST00000359366 RPL37P61927 97 aaKnown RBP2.66□□□□□ -1.98
ATXN3-202ENST00000359366 KRTAP5-9P26371 169 aa2.64□□□□□ -1.99
ATXN3-202ENST00000359366 H0YAA0 97 aa2.62□□□□□ -1.99
ATXN3-202ENST00000359366 TPRXLQ17RH7 258 aa2.62□□□□□ -1.99
ATXN3-202ENST00000359366 COX6B2Q6YFQ2 88 aa2.61□□□□□ -1.99
ATXN3-202ENST00000359366 A0A1B0GU33 70 aa2.6□□□□□ -1.99
ATXN3-202ENST00000359366 HMCN2Q8NDA2 5059 aa2.6□□□□□ -1.99
ATXN3-202ENST00000359366 KRTAP4-1Q9BYQ7 146 aa2.58□□□□□ -2
ATXN3-202ENST00000359366 CRIPTQ9P021 101 aa2.58□□□□□ -2
ATXN3-202ENST00000359366 RNF213Q63HN8 5207 aa2.58□□□□□ -2
ATXN3-202ENST00000359366 MUC17Q685J3 4493 aa2.58□□□□□ -2
ATXN3-202ENST00000359366 H1FX-AS1Q4G0G2 97 aa2.57□□□□□ -2
ATXN3-202ENST00000359366 KRTAP5-1Q6L8H4 278 aa2.57□□□□□ -2
ATXN3-202ENST00000359366 KRTAP5-4Q6L8H1 288 aa2.56□□□□□ -2
ATXN3-202ENST00000359366 S4R3F8 94 aa2.53□□□□□ -2.01
ATXN3-202ENST00000359366 FAT4Q6V0I7 4981 aa2.52□□□□□ -2.01
ATXN3-202ENST00000359366 KRTAP10-6P60371 365 aaPredicted RBP2.51□□□□□ -2.01
ATXN3-202ENST00000359366 KRTAP4-4Q9BYR3 166 aa2.5□□□□□ -2.01
ATXN3-202ENST00000359366 PRO2289Q9P1D8 64 aa2.5□□□□□ -2.01
ATXN3-202ENST00000359366 FLGP20930 4061 aaPredicted RBP2.49□□□□□ -2.01
ATXN3-202ENST00000359366 PLAC4Q8WY50 150 aa2.49□□□□□ -2.01
ATXN3-202ENST00000359366 KRTAP19-2Q3LHN2 52 aa2.47□□□□□ -2.01
ATXN3-202ENST00000359366 KRTAP13-4Q3LI77 160 aa2.44□□□□□ -2.02
ATXN3-202ENST00000359366 LCE1EQ5T753 118 aa2.44□□□□□ -2.02
ATXN3-202ENST00000359366 C10orf95Q9H7T3 257 aa2.44□□□□□ -2.02
ATXN3-202ENST00000359366 A0A0D9SG42 100 aa2.43□□□□□ -2.02
ATXN3-202ENST00000359366 CRCT1Q9UGL9 99 aa2.4□□□□□ -2.02
ATXN3-202ENST00000359366 INE1O15225 51 aa2.4□□□□□ -2.03
ATXN3-202ENST00000359366 R4GN34 69 aa2.38□□□□□ -2.03
ATXN3-202ENST00000359366 M0R2T5 61 aa2.36□□□□□ -2.03
ATXN3-202ENST00000359366 M0QZ58 72 aa2.35□□□□□ -2.03
ATXN3-202ENST00000359366 MT1HP80294 61 aa2.35□□□□□ -2.03
ATXN3-202ENST00000359366 KRTAP12-2P59991 146 aa2.34□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms