RNA–Protein interactions for RNA: ENST00000358918.7

APP-205, Transcript of amyloid beta precursor protein, humanhuman

TSL 5 BASIC

Gene APP, Length 2,366 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-205ENST00000358918 SPINT4Q6UDR6 99 aa7.55□□□□□ -1.2
APP-205ENST00000358918 TPRXLQ17RH7 258 aa7.5□□□□□ -1.21
APP-205ENST00000358918 A0A0D9SG42 100 aa7.49□□□□□ -1.21
APP-205ENST00000358918 RYR3Q15413 4870 aa7.49□□□□□ -1.21
APP-205ENST00000358918 PKHD1L1Q86WI1 4243 aa7.49□□□□□ -1.21
APP-205ENST00000358918 KRTAP10-6P60371 365 aaPredicted RBP7.47□□□□□ -1.21
APP-205ENST00000358918 KRTAP13-4Q3LI77 160 aa7.46□□□□□ -1.21
APP-205ENST00000358918 Q5VSD8 79 aa7.45□□□□□ -1.22
APP-205ENST00000358918 HSPG2P98160 4391 aa7.44□□□□□ -1.22
APP-205ENST00000358918 C10orf95Q9H7T3 257 aa7.41□□□□□ -1.22
APP-205ENST00000358918 KRTAP3-3Q9BYR6 98 aa7.4□□□□□ -1.23
APP-205ENST00000358918 LRP1Q07954 4544 aaKnown RBP7.4□□□□□ -1.23
APP-205ENST00000358918 KRTAP17-1Q9BYP8 105 aa7.39□□□□□ -1.23
APP-205ENST00000358918 KRTAP3-2Q9BYR7 98 aa7.39□□□□□ -1.23
APP-205ENST00000358918 KRTAP15-1Q3LI76 137 aa7.37□□□□□ -1.23
APP-205ENST00000358918 NDUFAF8A1L188 74 aa7.36□□□□□ -1.23
APP-205ENST00000358918 KRTAP10-8P60410 259 aa7.34□□□□□ -1.23
APP-205ENST00000358918 TNXBP22105 4242 aa7.34□□□□□ -1.23
APP-205ENST00000358918 RYR1P21817 5038 aa7.33□□□□□ -1.24
APP-205ENST00000358918 S4R3F8 94 aa7.33□□□□□ -1.24
APP-205ENST00000358918 KIAA1109Q2LD37 5005 aa7.28□□□□□ -1.24
APP-205ENST00000358918 FAT3Q8TDW7 4589 aa7.27□□□□□ -1.24
APP-205ENST00000358918 KRTAP12-2P59991 146 aa7.27□□□□□ -1.25
APP-205ENST00000358918 DMBT1Q9UGM3 2413 aaPredicted RBP7.25□□□□□ -1.25
APP-205ENST00000358918 EPPK1P58107 5090 aaKnown RBP7.23□□□□□ -1.25
APP-205ENST00000358918 MYCBP2O75592 4640 aa7.21□□□□□ -1.26
APP-205ENST00000358918 MT1HL1P0DM35 61 aa7.19□□□□□ -1.26
APP-205ENST00000358918 KRTAP12-1P59990 96 aa7.19□□□□□ -1.26
APP-205ENST00000358918 XP32Q5T750 250 aa7.16□□□□□ -1.26
APP-205ENST00000358918 KRTAP4-5Q9BYR2 181 aa7.1□□□□□ -1.27
APP-205ENST00000358918 M0QZ58 72 aa7.07□□□□□ -1.28
APP-205ENST00000358918 LPAP08519 4548 aa6.91□□□□□ -1.3
APP-205ENST00000358918 ABCA13Q86UQ4 5058 aa6.9□□□□□ -1.3
APP-205ENST00000358918 LRP2P98164 4655 aa6.9□□□□□ -1.31
APP-205ENST00000358918 PLAC4Q8WY50 150 aa6.88□□□□□ -1.31
APP-205ENST00000358918 J3QL48 77 aa6.86□□□□□ -1.31
APP-205ENST00000358918 R4GN34 69 aa6.82□□□□□ -1.32
APP-205ENST00000358918 HERC2O95714 4834 aa6.8□□□□□ -1.32
APP-205ENST00000358918 A0A0A0MQY5 61 aa6.79□□□□□ -1.32
APP-205ENST00000358918 LUZP6Q538Z0 58 aa6.79□□□□□ -1.32
APP-205ENST00000358918 BIRC6Q9NR09 4857 aa6.75□□□□□ -1.33
APP-205ENST00000358918 SEC61BP60468 96 aaKnown RBP6.69□□□□□ -1.34
APP-205ENST00000358918 PP632Q6XCG6 107 aa6.66□□□□□ -1.34
APP-205ENST00000358918 KRTAP4-1Q9BYQ7 146 aa6.62□□□□□ -1.35
APP-205ENST00000358918 LORP23490 312 aaPredicted RBP6.6□□□□□ -1.35
APP-205ENST00000358918 MUC17Q685J3 4493 aa6.59□□□□□ -1.35
APP-205ENST00000358918 CAMK2N1Q7Z7J9 78 aa6.54□□□□□ -1.36
APP-205ENST00000358918 PCLOQ9Y6V0 5065 aa6.48□□□□□ -1.37
APP-205ENST00000358918 HERC1Q15751 4861 aa6.48□□□□□ -1.37
APP-205ENST00000358918 MUC2Q02817 5179 aa6.44□□□□□ -1.38
APP-205ENST00000358918 KRTAP19-2Q3LHN2 52 aa6.44□□□□□ -1.38
APP-205ENST00000358918 HMCN2Q8NDA2 5059 aa6.38□□□□□ -1.39
APP-205ENST00000358918 TNP1P09430 55 aa6.33□□□□□ -1.4
APP-205ENST00000358918 KRTAP23-1A1A580 65 aa6.32□□□□□ -1.4
APP-205ENST00000358918 SPRR5A0A1B0GTR4 108 aa6.31□□□□□ -1.4
APP-205ENST00000358918 FLGP20930 4061 aaPredicted RBP6.26□□□□□ -1.41
APP-205ENST00000358918 LCE2CQ5TA81 110 aa6.17□□□□□ -1.42
APP-205ENST00000358918 FAT4Q6V0I7 4981 aa6.14□□□□□ -1.43
APP-205ENST00000358918 UBR4Q5T4S7 5183 aa6.12□□□□□ -1.43
APP-205ENST00000358918 RNF213Q63HN8 5207 aa6.08□□□□□ -1.44
APP-205ENST00000358918 M0R2T5 61 aa6.06□□□□□ -1.44
APP-205ENST00000358918 MT1HP80294 61 aa6.04□□□□□ -1.44
APP-205ENST00000358918 PRO2289Q9P1D8 64 aa6.03□□□□□ -1.44
APP-205ENST00000358918 LCE3AQ5TA76 89 aa5.93□□□□□ -1.46
APP-205ENST00000358918 INE1O15225 51 aa5.92□□□□□ -1.46
APP-205ENST00000358918 SPRR2GQ9BYE4 73 aa5.88□□□□□ -1.47
APP-205ENST00000358918 MT2AP02795 61 aa5.87□□□□□ -1.47
APP-205ENST00000358918 MT1FP04733 61 aa5.87□□□□□ -1.47
APP-205ENST00000358918 KRTAP10-10P60014 251 aa5.86□□□□□ -1.47
APP-205ENST00000358918 KRTAP19-1Q8IUB9 90 aa5.86□□□□□ -1.47
APP-205ENST00000358918 KRTAP9-8Q9BYQ0 159 aa5.86□□□□□ -1.47
APP-205ENST00000358918 KRTAP8-1Q8IUC2 63 aa5.77□□□□□ -1.49
APP-205ENST00000358918 KRTAP19-8Q3LI54 63 aa5.64□□□□□ -1.51
APP-205ENST00000358918 KRTAP12-3P60328 96 aa5.63□□□□□ -1.51
APP-205ENST00000358918 KRTAP9-3Q9BYQ3 159 aa5.62□□□□□ -1.51
APP-205ENST00000358918 MT1BP07438 61 aa5.6□□□□□ -1.51
APP-205ENST00000358918 KRTAP10-12P60413 245 aa5.57□□□□□ -1.52
APP-205ENST00000358918 LCE2AQ5TA79 106 aaPredicted RBP5.55□□□□□ -1.52
APP-205ENST00000358918 KRTAP10-5P60370 271 aa5.54□□□□□ -1.52
APP-205ENST00000358918 MT1XP80297 61 aa5.52□□□□□ -1.53
APP-205ENST00000358918 LCE2BO14633 110 aa5.45□□□□□ -1.54
APP-205ENST00000358918 KRTAP10-7P60409 375 aaPredicted RBP5.41□□□□□ -1.54
APP-205ENST00000358918 USH2AO75445 5202 aa5.33□□□□□ -1.56
APP-205ENST00000358918 LCE3CQ5T5A8 94 aa5.32□□□□□ -1.56
APP-205ENST00000358918 KRTAP19-5Q3LI72 72 aa5.26□□□□□ -1.57
APP-205ENST00000358918 KRTAP9-6A8MVA2 160 aa5.13□□□□□ -1.59
APP-205ENST00000358918 KRTAP2-3P0C7H8 128 aa5.11□□□□□ -1.59
APP-205ENST00000358918 KRTAP2-4Q9BYR9 128 aa5.11□□□□□ -1.59
APP-205ENST00000358918 KRTAP2-1Q9BYU5 128 aa5.11□□□□□ -1.59
APP-205ENST00000358918 KMT2DO14686 5537 aa5.1□□□□□ -1.59
APP-205ENST00000358918 KRTAP4-8A0A0G2JLE6 195 aa5.08□□□□□ -1.6
APP-205ENST00000358918 KRTAP4-8Q9BYQ9 185 aa5.08□□□□□ -1.6
APP-205ENST00000358918 FSIP2Q5CZC0 6907 aa5.02□□□□□ -1.61
APP-205ENST00000358918 SSPOA2VEC9 5147 aa5.02□□□□□ -1.61
APP-205ENST00000358918 KRTAP19-6Q3LI70 58 aa4.97□□□□□ -1.61
APP-205ENST00000358918 KRTAP4-7Q9BYR0 210 aa4.94□□□□□ -1.62
APP-205ENST00000358918 KRTAP19-4Q3LI73 84 aa4.91□□□□□ -1.62
APP-205ENST00000358918 KRTAP19-7Q3SYF9 63 aa4.91□□□□□ -1.62
APP-205ENST00000358918 LCE2DQ5TA82 110 aaPredicted RBP4.87□□□□□ -1.63
APP-205ENST00000358918 MT1LQ93083 61 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms