RNA–Protein interactions for RNA: ENST00000358173.7

EPHB4-201, Transcript of EPH receptor B4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB4, Length 4,329 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-201ENST00000358173 LRP1BQ9NZR2 4599 aa7.8□□□□□ -1.16
EPHB4-201ENST00000358173 DNAH17Q9UFH2 4485 aa7.8□□□□□ -1.16
EPHB4-201ENST00000358173 CMYA5Q8N3K9 4069 aa7.79□□□□□ -1.16
EPHB4-201ENST00000358173 ALMS1Q8TCU4 4167 aa7.78□□□□□ -1.16
EPHB4-201ENST00000358173 DNAH3Q8TD57 4116 aa7.77□□□□□ -1.17
EPHB4-201ENST00000358173 KRTAP12-2P59991 146 aa7.75□□□□□ -1.17
EPHB4-201ENST00000358173 DNAH2Q9P225 4427 aa7.74□□□□□ -1.17
EPHB4-201ENST00000358173 KRTAP13-4Q3LI77 160 aa7.72□□□□□ -1.17
EPHB4-201ENST00000358173 DNAH8Q96JB1 4490 aa7.72□□□□□ -1.17
EPHB4-201ENST00000358173 KRTAP10-6P60371 365 aaPredicted RBP7.71□□□□□ -1.18
EPHB4-201ENST00000358173 KIAA1109Q2LD37 5005 aa7.67□□□□□ -1.18
EPHB4-201ENST00000358173 TNP1P09430 55 aa7.66□□□□□ -1.18
EPHB4-201ENST00000358173 DNAH7Q8WXX0 4024 aa7.65□□□□□ -1.18
EPHB4-201ENST00000358173 RYR1P21817 5038 aa7.65□□□□□ -1.19
EPHB4-201ENST00000358173 KRTAP12-1P59990 96 aa7.64□□□□□ -1.19
EPHB4-201ENST00000358173 KRTAP10-10P60014 251 aa7.63□□□□□ -1.19
EPHB4-201ENST00000358173 DYNC2H1Q8NCM8 4307 aaKnown RBP7.6□□□□□ -1.19
EPHB4-201ENST00000358173 PP632Q6XCG6 107 aa7.55□□□□□ -1.2
EPHB4-201ENST00000358173 DNAH6Q9C0G6 4158 aa7.55□□□□□ -1.2
EPHB4-201ENST00000358173 KRTAP3-3Q9BYR6 98 aa7.54□□□□□ -1.2
EPHB4-201ENST00000358173 MYCBP2O75592 4640 aa7.54□□□□□ -1.2
EPHB4-201ENST00000358173 VPS13BQ7Z7G8 4022 aa7.52□□□□□ -1.21
EPHB4-201ENST00000358173 RYR3Q15413 4870 aa7.52□□□□□ -1.21
EPHB4-201ENST00000358173 SACSQ9NZJ4 4579 aa7.52□□□□□ -1.21
EPHB4-201ENST00000358173 KRTAP3-2Q9BYR7 98 aa7.51□□□□□ -1.21
EPHB4-201ENST00000358173 HYDINQ4G0P3 5121 aa7.51□□□□□ -1.21
EPHB4-201ENST00000358173 FRAS1Q86XX4 4008 aa7.48□□□□□ -1.21
EPHB4-201ENST00000358173 FAT2Q9NYQ8 4349 aa7.46□□□□□ -1.21
EPHB4-201ENST00000358173 APOBP04114 4563 aaKnown RBP7.43□□□□□ -1.22
EPHB4-201ENST00000358173 LRP1Q07954 4544 aaKnown RBP7.43□□□□□ -1.22
EPHB4-201ENST00000358173 HECTD4Q9Y4D8 3996 aa7.41□□□□□ -1.22
EPHB4-201ENST00000358173 FAT3Q8TDW7 4589 aa7.38□□□□□ -1.23
EPHB4-201ENST00000358173 PKHD1P08F94 4074 aa7.38□□□□□ -1.23
EPHB4-201ENST00000358173 KRTAP17-1Q9BYP8 105 aa7.34□□□□□ -1.23
EPHB4-201ENST00000358173 RYR2Q92736 4967 aa7.33□□□□□ -1.24
EPHB4-201ENST00000358173 KMT2CQ8NEZ4 4911 aaKnown RBP7.33□□□□□ -1.24
EPHB4-201ENST00000358173 KRTAP15-1Q3LI76 137 aa7.18□□□□□ -1.26
EPHB4-201ENST00000358173 KRTAP4-1Q9BYQ7 146 aa7.18□□□□□ -1.26
EPHB4-201ENST00000358173 HERC2O95714 4834 aa7.12□□□□□ -1.27
EPHB4-201ENST00000358173 LORP23490 312 aaPredicted RBP7.11□□□□□ -1.27
EPHB4-201ENST00000358173 PRO2289Q9P1D8 64 aa7.09□□□□□ -1.27
EPHB4-201ENST00000358173 LRP2P98164 4655 aa7.07□□□□□ -1.28
EPHB4-201ENST00000358173 PKD1P98161 4303 aa7.04□□□□□ -1.28
EPHB4-201ENST00000358173 HSPG2P98160 4391 aa7.01□□□□□ -1.29
EPHB4-201ENST00000358173 EPPK1P58107 5090 aaKnown RBP6.92□□□□□ -1.3
EPHB4-201ENST00000358173 BIRC6Q9NR09 4857 aa6.82□□□□□ -1.32
EPHB4-201ENST00000358173 LPAP08519 4548 aa6.79□□□□□ -1.32
EPHB4-201ENST00000358173 MT1HP80294 61 aa6.74□□□□□ -1.33
EPHB4-201ENST00000358173 ABCA13Q86UQ4 5058 aa6.74□□□□□ -1.33
EPHB4-201ENST00000358173 PCLOQ9Y6V0 5065 aa6.63□□□□□ -1.35
EPHB4-201ENST00000358173 MT2AP02795 61 aa6.62□□□□□ -1.35
EPHB4-201ENST00000358173 KRTAP10-12P60413 245 aa6.59□□□□□ -1.35
EPHB4-201ENST00000358173 PKHD1L1Q86WI1 4243 aa6.59□□□□□ -1.35
EPHB4-201ENST00000358173 LCE3AQ5TA76 89 aa6.58□□□□□ -1.36
EPHB4-201ENST00000358173 MT1FP04733 61 aa6.57□□□□□ -1.36
EPHB4-201ENST00000358173 TNXBP22105 4242 aa6.57□□□□□ -1.36
EPHB4-201ENST00000358173 HERC1Q15751 4861 aa6.55□□□□□ -1.36
EPHB4-201ENST00000358173 KRTAP23-1A1A580 65 aa6.54□□□□□ -1.36
EPHB4-201ENST00000358173 KRTAP12-3P60328 96 aa6.47□□□□□ -1.37
EPHB4-201ENST00000358173 SPRR2GQ9BYE4 73 aa6.47□□□□□ -1.37
EPHB4-201ENST00000358173 MUC2Q02817 5179 aa6.37□□□□□ -1.39
EPHB4-201ENST00000358173 RNF213Q63HN8 5207 aa6.36□□□□□ -1.39
EPHB4-201ENST00000358173 LCE2CQ5TA81 110 aa6.36□□□□□ -1.39
EPHB4-201ENST00000358173 KRTAP19-1Q8IUB9 90 aa6.35□□□□□ -1.39
EPHB4-201ENST00000358173 INE1O15225 51 aa6.3□□□□□ -1.4
EPHB4-201ENST00000358173 UBR4Q5T4S7 5183 aa6.26□□□□□ -1.41
EPHB4-201ENST00000358173 KRTAP19-2Q3LHN2 52 aa6.25□□□□□ -1.41
EPHB4-201ENST00000358173 KRTAP9-8Q9BYQ0 159 aa6.23□□□□□ -1.41
EPHB4-201ENST00000358173 FAT4Q6V0I7 4981 aa6.22□□□□□ -1.41
EPHB4-201ENST00000358173 CRCT1Q9UGL9 99 aa6.21□□□□□ -1.42
EPHB4-201ENST00000358173 MUC17Q685J3 4493 aa6.2□□□□□ -1.42
EPHB4-201ENST00000358173 FSIP2Q5CZC0 6907 aa6.19□□□□□ -1.42
EPHB4-201ENST00000358173 FLGP20930 4061 aaPredicted RBP6.12□□□□□ -1.43
EPHB4-201ENST00000358173 HMCN2Q8NDA2 5059 aa6.11□□□□□ -1.43
EPHB4-201ENST00000358173 KRTAP8-1Q8IUC2 63 aa6.11□□□□□ -1.43
EPHB4-201ENST00000358173 KRTAP19-8Q3LI54 63 aa6.11□□□□□ -1.43
EPHB4-201ENST00000358173 MT1BP07438 61 aa6.08□□□□□ -1.44
EPHB4-201ENST00000358173 KRTAP10-7P60409 375 aaPredicted RBP6.05□□□□□ -1.44
EPHB4-201ENST00000358173 MT1XP80297 61 aa6.02□□□□□ -1.45
EPHB4-201ENST00000358173 KRTAP9-3Q9BYQ3 159 aa6.01□□□□□ -1.45
EPHB4-201ENST00000358173 KRTAP19-5Q3LI72 72 aa5.98□□□□□ -1.45
EPHB4-201ENST00000358173 KRTAP10-5P60370 271 aa5.97□□□□□ -1.45
EPHB4-201ENST00000358173 SPRR5A0A1B0GTR4 108 aa5.87□□□□□ -1.47
EPHB4-201ENST00000358173 LCE2BO14633 110 aa5.87□□□□□ -1.47
EPHB4-201ENST00000358173 KRTAP4-8A0A0G2JLE6 195 aa5.86□□□□□ -1.47
EPHB4-201ENST00000358173 KRTAP4-8Q9BYQ9 185 aa5.86□□□□□ -1.47
EPHB4-201ENST00000358173 SPRR2FQ96RM1 72 aa5.82□□□□□ -1.48
EPHB4-201ENST00000358173 LCE3CQ5T5A8 94 aa5.8□□□□□ -1.48
EPHB4-201ENST00000358173 LCE2AQ5TA79 106 aaPredicted RBP5.66□□□□□ -1.5
EPHB4-201ENST00000358173 USH2AO75445 5202 aa5.54□□□□□ -1.52
EPHB4-201ENST00000358173 KRTAP4-7Q9BYR0 210 aa5.47□□□□□ -1.53
EPHB4-201ENST00000358173 SYNE1Q8NF91 8797 aaKnown RBP5.41□□□□□ -1.54
EPHB4-201ENST00000358173 MT1GP13640 62 aa5.41□□□□□ -1.54
EPHB4-201ENST00000358173 KRTAP19-4Q3LI73 84 aa5.37□□□□□ -1.55
EPHB4-201ENST00000358173 SPRR2EP22531 72 aa5.37□□□□□ -1.55
EPHB4-201ENST00000358173 SPRR2BP35325 72 aa5.37□□□□□ -1.55
EPHB4-201ENST00000358173 SPRR2AP35326 72 aa5.37□□□□□ -1.55
EPHB4-201ENST00000358173 KRTAP19-6Q3LI70 58 aa5.35□□□□□ -1.55
EPHB4-201ENST00000358173 MT1EP04732 61 aa5.32□□□□□ -1.56
EPHB4-201ENST00000358173 MT1LQ93083 61 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms